Apaloderma vittatum (bar-tailed trogon): 104277171
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Entry
104277171 CDS
T08559
Symbol
LAMP1
Name
(RefSeq) lysosome-associated membrane glycoprotein 1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03272
Virion - Hepatitis viruses
avit03273
Virion - Lassa virus and SFTS virus
avit04140
Autophagy - animal
avit04142
Lysosome
avit04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104277171 (LAMP1)
03272 Virion - Hepatitis viruses
104277171 (LAMP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104277171 (LAMP1)
04142 Lysosome
104277171 (LAMP1)
04140 Autophagy - animal
104277171 (LAMP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
avit04131
]
104277171 (LAMP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avit04147
]
104277171 (LAMP1)
04090 CD molecules [BR:
avit04090
]
104277171 (LAMP1)
Membrane trafficking [BR:
avit04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
104277171 (LAMP1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
104277171 (LAMP1)
Other autophagy associated proteins
RNautophagy/DNautophagy
104277171 (LAMP1)
Exosome [BR:
avit04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
104277171 (LAMP1)
CD molecules [BR:
avit04090
]
Proteins
104277171 (LAMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
Motif
Other DBs
NCBI-GeneID:
104277171
NCBI-ProteinID:
XP_009872038
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
IQEHRPVGDNSSLAVSSVLPHIPSVKLRRQRTAITKGDPVLLSPACSYPVKAALVWSHVL
VVRAWRPEGSGSGFLQASSPFEVKDGSGKVCLIADLTVAFSVEYKSSGQKEFAHFFLPQN
ATVEPQSSCGKGNTSHPVLVLGFGAGHSLSLNFSESADTYQVEELVFYYNLSDATLFHNS
TAGDMKRVSHKNIIQAHMGTKYQCINSKQINMKNVNVTFSNVTLEAYLTNGTFSVNKTEC
AEDLFSTTVVPTTPKQTTSQVPTTSPAPTASPPNPAVGKYNVTGPNGTCVLAYMGLQLNI
TYLKKDEKMGLYVLNFVPPNTTSSGRCDNMSASLNLTFEKTRIIFFFALNASNEKFFLQG
VNVSTTLPSEAKVPQFEEANYNMSELRATVGNSYKCSAEENLQVTDKALVNVFNVQIQVF
KIDGDKFGAVEECQLDENNMLIPIIVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atacaggagcaccgcccagtaggagataacagctctctggctgtatccagcgtgctgcca
cacatcccctcggtgaagcttcgccggcagcgaacagctatcacaaagggtgatcctgtg
ctcctctcgcccgcgtgttcttaccctgtgaaggcagcactagtgtggtcacatgtgcta
gtggtgcgagcgtggagaccggaggggagcgggtcaggctttttacaggcttcctctcca
tttgaggtgaaagatggaagtggtaaggtctgcctaatcgctgatctgacggtagccttc
tcagtggaatacaaaagcagtgggcaaaaagagtttgcacactttttccttccacaaaat
gctacagtggagccacagagctcatgtggtaaaggtaacacatctcacccagttctggta
ctgggttttggagcaggacattcattaagcctgaatttctcagaatctgcagacacatac
caagttgaggagctagttttctactacaatctttcagatgcaactttattccataattca
actgcaggggacatgaagagagtatcacataaaaatattattcaggcacatatgggcaca
aaataccaatgcatcaactccaagcaaatcaacatgaagaatgtgaacgttacttttagc
aatgttactctggaagcctatctcacaaacggcactttcagtgtgaacaagacagaatgt
gctgaagacctgttctccactactgtagtgcctacaactcccaaacagactactagccag
gttccaacaactagtccagcaccaactgcatcgcccccaaatcctgcagttggtaaatac
aatgtgactggtccaaatggaacctgtgtacttgcctacatggggttgcagcttaatatc
acctatctgaaaaaagatgaaaagatgggtttgtatgtgctgaatttcgtaccacctaat
acgacttcttctgggcgatgcgataatatgtctgcctccttgaacctgacttttgaaaaa
acacggattatcttcttctttgcattgaacgcaagtaatgaaaaattcttcctgcaaggt
gtgaatgtaagcacgactctgccttctgaagcaaaagttccacagtttgaggaagcgaat
tacaacatgagtgagctgagagctacagttgggaactcctacaagtgcagtgcagaggag
aatctgcaggtcacagacaaagcccttgtcaatgtatttaatgttcagatccaggttttc
aagattgatggagacaaatttggggcagtggaagaatgtcaactggatgaaaataacatg
ctgatccctataatagttggtgctgcccttgccggtcttgttctaattgtcttgattgcg
tatttgattggcaggaagaggagccatgctggatatcaaacaatttaa
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integrated database retrieval system
