Apaloderma vittatum (bar-tailed trogon): 104277328
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Entry
104277328 CDS
T08559
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avit03036
]
104277328 (MSH4)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Meiosis-specific proteins
Others
104277328 (MSH4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
nSTAND3
AAA_22
nSTAND_NTPase5
ATPase_2
AAA_28
AAA_30
AAA_18
Motif
Other DBs
NCBI-GeneID:
104277328
NCBI-ProteinID:
XP_009872235
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
SYFGDRSSCAENTSTVNLTSSSPGQGLSSACAGRTPLSAGRSVCRSCTPLIGYSATSSSA
VSAHSVASVIVAVVEGRGLARGEVGMASIDLKNPEVILSQFADNTTYAKVITKLKILTPL
EIIMSNTACDAGNTTKLFSLITEHFKNVTFTTVQRKYFNETKGLEYIEQLCASEFSTVFM
EVQSKYYCLAAAAALLKYVEFIQNSVYAPKSLKVRFQGSEKTAMIDSSSAQNLELVINNR
DSRNGHTLFGVLNYTKTPGGSRKLRSNILEPLVDAETINTRLDCIQELLQDEELFFGLQA
VISKFLDTEQLLSVLVQIPKQDTVKTAESKITNLIYLKHTLELVEPLKAALRSCNTPLLK
AYYSSLEDTRFGIILEKITTVINDDTRYTKGCLSMRTQKCYAVKPNINEFLDIARRTYTE
IVDDIAGMITQLAEKYSLPMKTSFSSARGFFIQMNVDSSALPNGQLPSEFTKITKMKNTY
SFTSPDLIKMNERCQESLREIYHMTYLIVCKLLNEIYEHIHCLYKLSDIVSMLDMLLSFA
HACTLSDYVRPEFTDTVAIKQGWHPILEKIAMEKPVSNNTYLTEGNNFVIITGPNMSGKS
TYLKQIALCQIMAQIGSYVPAEYCSFRIAEQIFTRIGMDDDIETNASTFMKEMKEITYII
QNANDKSLIIIDELGRGTSAEEGIGICYAACEYLLNLKAFTLFATHFLELCHIDALYPNV
ENYHFEVQHVRSSAGNKEKIAYTYTLSKGYTEEKNYGLKAAEVSSLPSSVILDAKEITNH
IAKQILHRQKSTPEMIKQRAVYHLATRLVQTARNSRLDPDSLRIYLKGLKKKYEASCPAP
AQNDEL
NT seq
2542 nt
NT seq
+upstream
nt +downstream
nt
aatcatattttggggacagaagttcatgtgcagaaaatactagcacagtgaacctcacga
gctcttcgcctgggcaaggcctgagcagcgcgtgcgcaggcagaacacccctctctgccg
ggagatctgtctgcagaagctgtacccctcttatcgggtattcagctacatcctcatctg
cagtttctgctcattctgttgcatcggttattgtagctgtagtagaaggaagaggccttg
ccagaggggaagtaggaatggccagtattgacttgaaaaatcctgaggtgatattatcac
aatttgcagacaatacaacttatgccaaggttattactaaactcaagattttaacaccac
tagaaataataatgtcaaacactgcttgcgatgcaggaaacacaacaaaattgttcagtc
tgataacggaacatttcaaaaatgtgacttttacaactgtccaaagaaaatacttcaatg
aaacaaagggtttggaatacatagaacaattgtgtgcatctgaattcagcaccgttttca
tggaggttcaatcaaagtattactgtcttgcagctgctgcagctttgttaaaatatgttg
aatttattcaaaattcagtttatgctcctaaatcactcaaggtgcgtttccaggggagtg
agaaaacagctatgatagattcttcatcagcacaaaatcttgaactagtaattaataaca
gagattctcggaatggtcacacgctttttggtgtcctaaattacacgaaaactccaggtg
gaagtcgaaaacttagatccaacattctggagccactagttgatgctgaaacaattaaca
cgagactggactgtattcaggaattactccaggatgaggagctcttttttggtcttcaag
cagttatctcaaaattcctggatacagaacagctactttcagttttggtacaaatcccaa
agcaggacacagtcaaaactgctgagtcaaaaataactaatttaatctacctgaagcata
ctctagaacttgtggagcctctaaaagctgctttaagaagctgtaacacaccgctgctga
aggcttactacagttcacttgaagatacaaggtttggaattatacttgaaaagattacta
ctgtaattaatgacgatacaaggtacacaaaaggatgtcttagtatgaggacccagaaat
gctacgctgttaagcctaacatcaatgaattccttgacatagcccgtagaacatacacag
aaattgttgatgacatagcaggtatgattacacaacttgcagaaaagtacagcctaccaa
tgaaaacaagtttcagctctgctcgtgggttttttatccagatgaatgttgatagttcag
cattacccaatggccagcttccttcagaatttacaaagatcactaaaatgaaaaacacat
acagcttcacttcaccagatttaataaaaatgaatgaaagatgtcaggagtccctgagag
aaatatatcacatgacgtacttaatagtgtgtaagctactgaacgagatctatgaacaca
ttcactgcctgtacaagctgtctgacattgtgtcgatgctggatatgctgctttcatttg
ctcatgcctgcactctttctgattatgttcgtccagagtttacagatactgtagcgatca
agcagggatggcatcccattcttgaaaagatagctatggaaaaacctgtgtctaacaaca
cgtacctgacagagggtaacaattttgtcattattacgggaccaaatatgagtggaaaat
caacatacctaaaacagattgctctctgtcaaattatggcacagattggttcttatgtcc
cagcagagtattgttcttttcgaattgcagagcaaatttttaccagaataggtatggatg
atgacatagaaacaaatgcatcaacattcatgaaggagatgaaagagataacatacatca
tacaaaatgctaatgacaaatcactaatcataattgacgaacttggcagaggtaccagtg
ctgaagaaggtattggcatttgttatgctgcctgtgaatatctgttgaatttaaaggcct
ttacattgtttgctacacatttcctggaactgtgccatatagatgctttatatcccaatg
ttgaaaattaccattttgaagtgcagcatgtgagaagcagtgctggaaataaggagaaaa
ttgcttacacttacacactctctaaaggatatacagaggaaaagaactatggattaaaag
ctgcagaagtttcctctctaccatcatctgtaattttggatgcaaaggaaattacaaatc
atattgcaaaacaaattttgcacagacagaaaagcactcctgagatgataaaacagagag
ctgtataccatttagcaacaagattggttcagacggccagaaattctcgattggatcccg
acagtttgcgtatatatctgaaaggcttgaagaaaaagtatgaagccagttgtcctgcac
ctgcacaaaatgatgaactaca
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