Apaloderma vittatum (bar-tailed trogon): 104277377
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Entry
104277377 CDS
T08559
Symbol
PRDM11
Name
(RefSeq) PR domain-containing protein 11
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avit03000
]
104277377 (PRDM11)
Transcription factors [BR:
avit03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104277377 (PRDM11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
SET
Zn_ribbon_PRDM4
FOG1-like_PR
DUF7822
DUF4954
Motif
Other DBs
NCBI-GeneID:
104277377
NCBI-ProteinID:
XP_009872300
LinkDB
All DBs
Position
Unknown
AA seq
1109 aa
AA seq
DB search
MSENLKDCLIQTQTSIGEMVTIKTEACSLHQDQEYGQPCSGRPDPQSMEVEPKKLKGKRD
LIMTKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPPGMEVVK
EPSGENDVRCMNEVIPKGHIFGPYEGQISSQDKSAGFFSWLGSEIVDKNNRYKSIDGTDE
TKANWMRYVIISREEREQNLMAFQHSERIYFRACRDIRPGEKLRVWYSEDYMKRLHSMSQ
ETIHRNLTSGDKKLQREKPEKNTEDHEDAKGLLQLTTLKQGYKRSCDEGESHPQTKKKKI
DLIFKDVLEASLESAKFGENQLATSTPLAIRKASRYQAEDIFERCGSAMQHGSLNLGRNR
SEGEWKIPHGSSFSSAKEVGILEDEEEEPLSLTADSPTELSLASAQGNSHEIPTTSFCPN
CIRLKKKIRELQAELDMLRSGKLPEPSVLPPQVPELQEFSDPTASESIISVPTIMEDDDQ
EVDSADESVSNDMIAATDEPSKMSSATGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCR
QYTVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMTLLF
NTAYHLALEGRPYYDFRPLAELLRKCELKVVDQYMNEGDCQILIHHIARALREDLVERIL
SIILDGQSDDVLADTVAVYVQYTSSDGPPATEFLSLQELGFSTTDSYLQALDRAFSSLGI
RLQDEKPTIGLGVDGANITASLRANLFMTIRKTLPWLLCLPFMVHRPHLEILDAISGKEL
PCLEELENNLKQLLSFYRYSPRLMCELRVTAATLCEETEFLGDIRAVKWIIGEQNVLNAL
IKDYLEVVAHLKDVSGQTQRADASAIALALLQFLMDYQSIKLIYFLLDVIAVLSRLAYVF
QGEYLLVSQVDDKIEEAIQEISRLADSPGEYLQEFEENFRESFNGIAVKNLRVAEAKFQS
IREKICQKTQVILAQRFDSRSRTFVKACQVFDLAAWPRSTDELMSYGKEDMVQIFEHLET
VPSFSREVCREGMDTRGSLLTEWRELKVDYYTKNGFKDLLGHICKYKQRFPLLNKIVQIL
KVLPTSSSCCEKGRNALQRVRKNNRSRLT
NT seq
3326 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaacttgaaggactgtttgatccaaacccagacttccataggggagatggtg
acgataaaaacagaggcctgctctctgcaccaggaccaggagtatggacagccttgctct
ggaaggcctgacccacagtccatggaggtggagcccaagaaactgaaagggaaacgggat
ttgatcatgaccaagagctttcagcaagtggatttctggttctgcgagtcctgccaggag
tactttgtggatgagtgcccaaaccacggcccccctgtgttcgtgtctgacaccccagtg
cccgtgggcatccctgaccgggcagccctgaccatcccgcccggaatggaggtggtgaaa
gagcccagcggggagaacgacgtgcgctgtatgaatgaggtgatccccaaaggtcacatc
ttcgggccgtacgaggggcagatctctagccaggacaagtctgcaggattcttctcgtgg
ctggggagtgaaatcgttgataagaacaaccgctacaaatccatcgatgggacggatgaa
accaaagcaaactggatgaggtacgtgatcatctcccgggaggagagggagcagaacctg
atggccttccagcacagcgagaggatttacttccgagcatgccgcgacatccgccctggg
gagaagctgcgggtctggtacagcgaggattacatgaagcggttgcacagtatgtcccag
gagaccatccaccgaaatctcacaagtggagacaaaaagctgcagagggaaaagccagaa
aagaacacagaggatcatgaggacgcgaaggggctgctccagctcaccaccctaaagcag
ggatacaagcgcagctgtgacgagggggagtcccacccccaaacaaagaaaaaaaagatc
gacctcatcttcaaagacgtcctggaggcttccttggagtccgccaagtttggagagaac
cagttagccacgagcacgccgcttgccatcagaaaagcatctcggtaccaggctgaagac
atcttcgagaggtgtggcagcgccatgcagcacggctccctgaacctcggcagaaaccgg
agcgagggggaatggaagatcccccatggttcctctttcagctcagccaaagaggtgggc
atcctcgaagacgaggaagaagagcccctgtccctcacagcggacagcccgaccgagctg
tccctggcctctgcacaaggcaactcccacgaaatccccaccacctccttctgccccaac
tgcatccggctgaagaagaagatccgggagctgcaggctgagctagacatgctgagatct
gggaagctacctgagccgtccgtgttaccgccccaggtacccgagctccaagagttctcg
gaccccacagcttcagaaagcatcatctctgttcccaccatcatggaggacgatgaccaa
gaagtggattctgccgatgaatcggtttccaatgacatgattgctgctacagacgagcct
tccaagatgtcttctgcgacgggccggaggatacggcggttcaagcaagagtggcttaag
aagttctggtttctgcggtactccccgacattgaatgaaatgtggtgccacgtctgtagg
cagtacacggtgcaatcctctcggacttcggccttcatcattggctccaagcagttcaag
atacacacaataaagcttcacagccagagcaacctccacaagaagtgcctgcagctctac
aagctcaggatgcatccggagaagacggaagagatgtgccgaaacatgaccctgctcttc
aacacagcctaccacctggccctggagggaaggccctactacgactttcggccgctggcg
gaactactgagaaagtgcgaactcaaggtagtggatcagtacatgaacgagggagactgc
cagatcctgatccaccacatcgcccgggctcttcgggaggacctggtagaacgcattctc
agcatcattctggacgggcagagcgatgacgtgcttgcggacacagtggcggtctacgtg
cagtacacaagcagcgacgggccgccggcgaccgaattcctgtctctgcaggagctgggc
ttttctaccacagacagttacctccaagcattagacagggctttctccagcctgggaata
cggttgcaggatgagaagccaactattggcttgggtgtcgatggtgccaacatcaccgcc
agcctgagagccaacctgttcatgacaatcaggaagaccttgccctggcttctgtgcctg
cccttcatggtgcacaggccccacttagaaattctggatgccatcagcgggaaggagctg
ccctgcctggaggagctcgaaaacaatttgaagcagctgctcagcttctatcgttactct
ccccgactcatgtgtgagctgagggtgaccgcggccactctgtgcgaggagaccgagttc
ttgggggacatccgagcggtgaagtggatcatcggggagcagaatgtgctcaatgctctc
atcaaggattaccttgaggtcgtggcccatctcaaagatgtcagcggccagacgcagagg
gcggatgcttctgccatcgccttggccctcctgcagttcctcatggactaccagtcgatc
aaactcatctacttcctgctggatgtgattgctgtgctctcacgcctcgcctatgtcttc
caaggggagtacctcctcgtgtcgcaggtggacgacaaaatagaggaggccatccaggag
atcagccggctggcagactcgcctggggagtacttgcaggagtttgaggagaacttccgt
gaaagctttaatggcatcgccgtgaaaaacttacgggtggctgaagccaaattccagtcg
atcagagaaaagatctgccagaagacccaggtgatcctagcccagaggttcgattcccgt
agccggacattcgtgaaggcctgtcaggtgtttgacctcgccgcttggcccagaagcact
gatgagctcatgagctacgggaaggaggatatggtacaaatattcgagcacctggagaca
gtcccgtcgttctccagagaggtttgcagagaggggatggacacccgaggcagcctgctg
acggagtggcgagaactcaaggtggattattataccaaaaatggttttaaagacttgctc
ggtcacatttgtaaatacaaacagaggttccccctcttaaataagatagttcagatcctc
aaagtcctccccacctcgtcgtcctgctgcgagaagggccgcaacgccctgcagcgagta
cgcaagaacaaccgctcccggctcac
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