Entry |
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Name |
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RBBP6-like
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KO |
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Organism |
avit Apaloderma vittatum (bar-tailed trogon)
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Brite |
KEGG Orthology (KO) [BR:avit00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:avit04121]
104277485
Enzymes [BR:avit01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104277485
Ubiquitin system [BR:avit04121]
Ubiquitin ligases (E3)
U-box type E3
104277485
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
1723 aa
YTDDNALIPKNSSVIVRRIPIGGVKATSKTYVISRTEPVSGTSKAIDDSSASISLAQLTK
TANLAEANASEEDKIKAMMTQSGHEYDPVNYMKKPLGPPPPSYTCFRCGKPGHYIKNCPT
NGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEAYAIGKKEKP
PFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESEEHTC
PTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQVQXXXXXXXXXXXXPPPPPPP
PPPLMRQTITRNLQPLLRPAISRQQDPLMIPLASLASRSAAALSSLGPAQSAVAAGLPVN
PSSVIVSDLPPAVSLSLRGEKPDGPFRDADSVIPPAALVTAAELSKSSSLSISSLLEEKG
YQVPVLRQPALPSLLGPQGQSIPTTGHPMRAGTIRSAGGRPGWELSNRGRPHSDRAQRTQ
APTLPASAPVFVPVPPPPLYPPPXPLPPGVPPPQFPPQFPPGQPPSAGYSVPPPGYPPAP
ANMASAWVPAAVPAAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKE
LMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYS
RSPPYPRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRTVPQA
EGEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVGAQ
PRPPVNRENFSPDRFGPPGTRRENSPYARGRREDYPGGQSHRNRSIAGNYPEKPSGRESH
GIKDPTKSKEKEVENPMGDGKGNKHKKHRKRRKGDENEGFPSAELLEGVRKPREPVPSED
VKTDALFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKMDKTKRKVEVAVA
PKKDAAVKPAKAAQEKVDTDHEKSPRIEPPAKKLKEELPKTDSVKTSSSQKDEKALGTPR
KVHPKGTKDHPEARPAKEEKAKKDHPKEPKSEKPSNKEDKSKKTAEKSKSSDAKPEKRKR
KADDKVDKEQEGTSVKASKPDTAESKTSPKGKTEPDGERGERTPEKDKSTFLNNPAKKIK
LNRETGKKIVSGENVPPAKEPAEKPEPSSSKVKQEKTKGKVRRKVTAADGSSSTLVDYTS
TSSTGGSPVRKTEEKPDTKRTVIKTMEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEE
EDVKSTQVPTSIGKPASVIKNVSAKPPNPLKHNEREMEPLEKTQKTTKELSYESSQHDTK
SSKSSMSNEKGKTKDRDHSLSDKDTSEKRKSSVQPEKEHSERATEQGSGKTISQSSKESR
SSEKHDTGRGSATKDFTPNRDKKSDHDGNRDHSSSKRRDEKSELARRKDSPSRNREPAAV
QKSKPRDERAEPSKKGAGDTKRSSYSPPRERKQQSEHKAAHDSKRASEEHKPPDKTAGKE
KEKHVLEVKSNKEKDPGGNKLPLKQELPDVKNEKESVTAPPEKSVVKPKPQVSSSSRLSS
DLTRETDEAAFVPDYNESDSESNVSAKEEEAAGKTPKEAKEKSVEKAKEEAAAPAATAQP
EASRSQSQSSPSVSRSRSQSPSESQTRSHSSSASSGESQDSKKKKKKKEKKKHKKHKKHK
KHKKHVGTETELEKSQKHKHKKKKSKKSKDKEKDDQKAKSVAT |
NT seq |
5174 nt +upstreamnt +downstreamnt
aatacacagatgataatgccctgattccgaaaaactcatcggtaattgtgagaagaatcc
ctattggaggagttaaagctaccagcaaaacatatgttataagtcgaactgagccagtga
gtggaacatcaaaagcaattgatgactcttctgcatctatttcactggcccagcttacta
agactgccaatctggctgaagccaatgcttctgaagaagacaaaataaaagctatgatga
cacagtctggccacgaatatgatccagtcaattacatgaagaaacccttgggtccacctc
caccttcatatacttgctttcgttgtggaaaacctggccactacataaagaactgcccaa
caaatggggacaaaaattttgagtctgttccgagaattaaaaagagcacaggaattcccc
gaagtttcatgatggaggtgaaagatcccaatacgaagggcgccatgctgaccaacaccg
ggaagtacgcgataccgaccatcgatgcggaagcttatgctataggaaagaaagaaaagc
ctccctttttaccagaggagccatcctcctcctcagaagaagatgatcctattccagatg
agttattatgtctcatttgtaaagatataatgactgatgcagtagtaattccctgctgtg
gaaacagttattgtgacgaatgtattcggacagcattgctggagtctgaggaacatacat
gcccaacttgtcatcagacggatgtttctcccgatgctttaattgccaataagttcctac
gccaggccgtgaacaacttcaaaaatgaaactggctacacaaaaaggctccgaaagcagg
ttcagcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngccgccgccaccacctcctc
ctccaccacccctcatgagacaaacaataacgcgtaacctgcagcctctgctccggccgg
ccatttccaggcagcaggatccgctcatgattccgttggcttctctggcttctcgttctg
cggctgctttgtcatcactgggccctgctcagtcagctgtggcagctgggctgcctgtaa
atccatcttctgtgattgtctcggatctccctccagcagtgtccctgtctctccgcggtg
aaaagccagatggaccttttcgtgatgctgattctgttatacctcctgctgctctggtga
cggccgctgagctttctaaatcttcctctctgtctatcagcagtttgttggaagagaagg
gctatcaggttcctgtcctgagacaaccagcattaccaagtcttctgggccctcaaggac
aatcaatacccacaactggtcatcccatgagagctggtaccattcgctcagcaggtggca
gaccaggctgggaactttcaaatcgaggacgcccgcatagtgaccgtgctcaaaggactc
aggccccaacactaccagcatcagcaccagtctttgtgcctgtgcctccacctcccttgt
accctccaccanncccacttcctccgggggtgccaccaccacagtttcctcctcagtttc
cacctggtcagcctccgtcagccgggtactctgtccccccaccgggatatcccccagctc
ctgcaaacatggcctcagcttgggtaccagcagcagtaccggcggctcactcaaacacca
tcccaacgacacaagcccctcctctctctagggaggagttttaccgagagcagcggagac
taaaagaggaggaaaagaaaaagtccaaacttgatgagtttacaaatgattttgctaagg
aattgatggaatataaaaagattcaaaaggagcgtaggcgttcattttccaggtccaagt
ctccctatagtgcttcatcttactctagaagttcgtatacgtactccaagtcaagatctg
gttcttcccgctctcgctcctactcccgatcctttagtcgctcccattctcgctcctact
ctcgatcgccgccctacccgagaagaggcaaagggaagagccgtaactaccgctcgaggt
cgaggtcccacggttaccaccggtcaaggtccaggtcgcccccgtacaggagataccact
cccggtcaaggtctccggtgttcagaggccagtctcccaccaaacggactgtccctcagg
cggaaggagagagggagtatttcaacaggtacagagaggttccgccgtacgacatgaaag
cttactatggcagatctgtggacttcagagatccttttgaaaaggagaggtacagagaat
gggaaaggaactaccgagagtggtatgagaagttttacaagggctatgctgtcggcgctc
agcctcgacctccagtgaacagggagaacttttctccggacaggtttggtccgcctggga
ccagacgagagaattcaccgtatgctcggggccgtagggaggattatcctggtggacaga
gccacaggaatcgtagtatagctggaaattaccccgaaaaaccttccggaagggaaagcc
atggcatcaaagatcctacaaaatcgaaagagaaggaggtggaaaacccaatgggagatg
gcaaaggaaataaacataaaaagcaccggaagagaagaaaaggggatgagaacgaaggat
ttccgagtgctgagttgttagagggtgtgagaaagccaagagagccagttccatcagaag
acgttaaaacggacgctctgttcatgcttccgagcagagatgatgccactcccgtgagag
atgagcctatggaagcagattctatcgctttcaaaccggtgtccgagaaggagaaaaaag
agaaggacaagccaaaagcaaaaatggacaaaacaaagaggaaagtggaagtggccgttg
cccctaagaaagacgctgcagtaaaaccagctaaagctgcccaggagaaggtggacaccg
atcatgaaaaatctccccgaatagaaccccctgcgaaaaaattgaaggaggagttgccaa
agacagacagtgttaaaacgtcttcctctcaaaaggatgagaaggctcttggtaccccgc
ggaaagttcaccccaaagggacaaaagatcacccagaggccagaccagccaaggaggaga
aggcaaagaaagaccatccaaaagaacccaagtcggagaagccctccaacaaagaagaca
agtctaaaaaaactgctgaaaaaagcaaatcttctgatgccaaacctgaaaaaaggaaaa
ggaaagcggatgacaaggtcgataaagagcaggaaggcacttccgtaaaggcctctaaac
ccgacactgctgaatcgaaaacgtcgccgaaggggaagacggagcctgatggtgagagag
gagagcgaactccagagaaggataaatcgacttttcttaacaaccccgccaaaaagatta
aacttaaccgagaaactggcaaaaagattgtgagcggagaaaacgtgccacctgcgaaag
aacctgcggagaaacctgagccgagcagcagcaaagtgaaacaagaaaaaacgaagggca
aagtgagaagaaaagtaacagcagctgacggctccagttccactcttgtagattacacca
gcacgagttctaccgggggaagccccgttagaaagactgaagaaaagccagatacaaaac
gaactgtcattaagaccatggaggagtataacaacgatataacagcccctgctgaagacg
tcattattatgatccaggtccctcagtcaaagtgggacaaggatgactttgagtcggaag
aggaggacgttaaatcgacccaggtgcccacaagcataggaaaacctgctagtgttataa
aaaatgtgagtgcaaagccgccaaaccccctaaaacacaatgaaagagagatggaacctt
tggagaaaacacagaagactacaaaggagctgagttatgaaagctcccagcatgacacaa
aaagttcaaaaagttcgatgtcgaatgaaaaaggaaaaaccaaagaccgggatcattcgt
tgtcagacaaggacacttctgagaagagaaagagcagcgttcagccagaaaaagagcact
cggaacgtgcaactgaacaaggaagtggaaaaactatttctcagtcttctaaagagagca
ggtcttcagagaaacacgatactggccgtggatccgccacgaaagactttactcccaaca
gagacaaaaaatctgaccacgatggcaacagagatcactccagttccaagcggagagatg
aaaagagcgaattagcgaggagaaaggactccccttctcgaaacagagaacctgcagcag
tgcagaaaagcaaaccgagagacgagcgtgcagagccatccaaaaagggcgccggggaca
ccaaaaggagcagctacagccccccgcgcgagcggaagcagcagtcggagcacaaagctg
ctcacgactccaagcgcgcgtcggaggagcacaaacctccggataagactgcagggaaag
agaaggagaagcatgtcctggaggtaaagagcaataaagagaaagatccaggtggtaaca
aactgcctttgaaacaagaattgcccgatgtcaaaaatgagaaagagagcgtgacggcgc
cacctgagaagagcgttgtcaagcccaagcctcaggtcagcagctcctcgcggctctcct
ccgacctgacgagagagaccgacgaggcggccttcgtgccagactacaacgaaagtgaca
gtgagagtaatgtatctgcaaaagaggaggaagcggcgggaaaaactcctaaagaagcga
aagagaagagtgttgagaaggcgaaagaggaagcggcagcccctgccgcgaccgcgcagc
ccgaggcgagccgcagccagagccagagcagccccagcgtgagccgcagccgcagccaga
gcccttcggagagtcagactcggagccacagcagcagtgccagctcaggagagagccaag
acagcaagaaaaagaaaaagaagaaagagaagaagaagcacaagaagcataagaaacaca
agaagcataagaagcacgtcggaaccgaaacggaattggaaaagagccaaaaacacaaac
acaagaagaaaaaatcgaagaagagcaaagataaagagaaagatgaccaaaaagcgaaat
ctgtcgctacgtag |