KEGG   Apaloderma vittatum (bar-tailed trogon): 104277485
Entry
104277485         CDS       T08559                                 
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RBBP6-like
  KO
K10624  E3 ubiquitin-protein ligase RBBP6 [EC:2.3.2.27]
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:avit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:avit04121]
    104277485
Enzymes [BR:avit01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104277485
Ubiquitin system [BR:avit04121]
 Ubiquitin ligases (E3)
  U-box type E3
   104277485
SSDB
Motif
Pfam: zf-CCHC_2 U-box zf-C3HC4_2 zf-C3HC4_3 zf-CCHC DWNN zf-RING_UBOX zf-RING_2 zf-C3HC4 zf-RING_5 zf-C3HC4_4
Other DBs
NCBI-GeneID: 104277485
NCBI-ProteinID: XP_009872432
LinkDB
Position
Unknown
AA seq 1723 aa
YTDDNALIPKNSSVIVRRIPIGGVKATSKTYVISRTEPVSGTSKAIDDSSASISLAQLTK
TANLAEANASEEDKIKAMMTQSGHEYDPVNYMKKPLGPPPPSYTCFRCGKPGHYIKNCPT
NGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEAYAIGKKEKP
PFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESEEHTC
PTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQVQXXXXXXXXXXXXPPPPPPP
PPPLMRQTITRNLQPLLRPAISRQQDPLMIPLASLASRSAAALSSLGPAQSAVAAGLPVN
PSSVIVSDLPPAVSLSLRGEKPDGPFRDADSVIPPAALVTAAELSKSSSLSISSLLEEKG
YQVPVLRQPALPSLLGPQGQSIPTTGHPMRAGTIRSAGGRPGWELSNRGRPHSDRAQRTQ
APTLPASAPVFVPVPPPPLYPPPXPLPPGVPPPQFPPQFPPGQPPSAGYSVPPPGYPPAP
ANMASAWVPAAVPAAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKE
LMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYS
RSPPYPRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRTVPQA
EGEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVGAQ
PRPPVNRENFSPDRFGPPGTRRENSPYARGRREDYPGGQSHRNRSIAGNYPEKPSGRESH
GIKDPTKSKEKEVENPMGDGKGNKHKKHRKRRKGDENEGFPSAELLEGVRKPREPVPSED
VKTDALFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKMDKTKRKVEVAVA
PKKDAAVKPAKAAQEKVDTDHEKSPRIEPPAKKLKEELPKTDSVKTSSSQKDEKALGTPR
KVHPKGTKDHPEARPAKEEKAKKDHPKEPKSEKPSNKEDKSKKTAEKSKSSDAKPEKRKR
KADDKVDKEQEGTSVKASKPDTAESKTSPKGKTEPDGERGERTPEKDKSTFLNNPAKKIK
LNRETGKKIVSGENVPPAKEPAEKPEPSSSKVKQEKTKGKVRRKVTAADGSSSTLVDYTS
TSSTGGSPVRKTEEKPDTKRTVIKTMEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEE
EDVKSTQVPTSIGKPASVIKNVSAKPPNPLKHNEREMEPLEKTQKTTKELSYESSQHDTK
SSKSSMSNEKGKTKDRDHSLSDKDTSEKRKSSVQPEKEHSERATEQGSGKTISQSSKESR
SSEKHDTGRGSATKDFTPNRDKKSDHDGNRDHSSSKRRDEKSELARRKDSPSRNREPAAV
QKSKPRDERAEPSKKGAGDTKRSSYSPPRERKQQSEHKAAHDSKRASEEHKPPDKTAGKE
KEKHVLEVKSNKEKDPGGNKLPLKQELPDVKNEKESVTAPPEKSVVKPKPQVSSSSRLSS
DLTRETDEAAFVPDYNESDSESNVSAKEEEAAGKTPKEAKEKSVEKAKEEAAAPAATAQP
EASRSQSQSSPSVSRSRSQSPSESQTRSHSSSASSGESQDSKKKKKKKEKKKHKKHKKHK
KHKKHVGTETELEKSQKHKHKKKKSKKSKDKEKDDQKAKSVAT
NT seq 5174 nt   +upstreamnt  +downstreamnt
aatacacagatgataatgccctgattccgaaaaactcatcggtaattgtgagaagaatcc
ctattggaggagttaaagctaccagcaaaacatatgttataagtcgaactgagccagtga
gtggaacatcaaaagcaattgatgactcttctgcatctatttcactggcccagcttacta
agactgccaatctggctgaagccaatgcttctgaagaagacaaaataaaagctatgatga
cacagtctggccacgaatatgatccagtcaattacatgaagaaacccttgggtccacctc
caccttcatatacttgctttcgttgtggaaaacctggccactacataaagaactgcccaa
caaatggggacaaaaattttgagtctgttccgagaattaaaaagagcacaggaattcccc
gaagtttcatgatggaggtgaaagatcccaatacgaagggcgccatgctgaccaacaccg
ggaagtacgcgataccgaccatcgatgcggaagcttatgctataggaaagaaagaaaagc
ctccctttttaccagaggagccatcctcctcctcagaagaagatgatcctattccagatg
agttattatgtctcatttgtaaagatataatgactgatgcagtagtaattccctgctgtg
gaaacagttattgtgacgaatgtattcggacagcattgctggagtctgaggaacatacat
gcccaacttgtcatcagacggatgtttctcccgatgctttaattgccaataagttcctac
gccaggccgtgaacaacttcaaaaatgaaactggctacacaaaaaggctccgaaagcagg
ttcagcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngccgccgccaccacctcctc
ctccaccacccctcatgagacaaacaataacgcgtaacctgcagcctctgctccggccgg
ccatttccaggcagcaggatccgctcatgattccgttggcttctctggcttctcgttctg
cggctgctttgtcatcactgggccctgctcagtcagctgtggcagctgggctgcctgtaa
atccatcttctgtgattgtctcggatctccctccagcagtgtccctgtctctccgcggtg
aaaagccagatggaccttttcgtgatgctgattctgttatacctcctgctgctctggtga
cggccgctgagctttctaaatcttcctctctgtctatcagcagtttgttggaagagaagg
gctatcaggttcctgtcctgagacaaccagcattaccaagtcttctgggccctcaaggac
aatcaatacccacaactggtcatcccatgagagctggtaccattcgctcagcaggtggca
gaccaggctgggaactttcaaatcgaggacgcccgcatagtgaccgtgctcaaaggactc
aggccccaacactaccagcatcagcaccagtctttgtgcctgtgcctccacctcccttgt
accctccaccanncccacttcctccgggggtgccaccaccacagtttcctcctcagtttc
cacctggtcagcctccgtcagccgggtactctgtccccccaccgggatatcccccagctc
ctgcaaacatggcctcagcttgggtaccagcagcagtaccggcggctcactcaaacacca
tcccaacgacacaagcccctcctctctctagggaggagttttaccgagagcagcggagac
taaaagaggaggaaaagaaaaagtccaaacttgatgagtttacaaatgattttgctaagg
aattgatggaatataaaaagattcaaaaggagcgtaggcgttcattttccaggtccaagt
ctccctatagtgcttcatcttactctagaagttcgtatacgtactccaagtcaagatctg
gttcttcccgctctcgctcctactcccgatcctttagtcgctcccattctcgctcctact
ctcgatcgccgccctacccgagaagaggcaaagggaagagccgtaactaccgctcgaggt
cgaggtcccacggttaccaccggtcaaggtccaggtcgcccccgtacaggagataccact
cccggtcaaggtctccggtgttcagaggccagtctcccaccaaacggactgtccctcagg
cggaaggagagagggagtatttcaacaggtacagagaggttccgccgtacgacatgaaag
cttactatggcagatctgtggacttcagagatccttttgaaaaggagaggtacagagaat
gggaaaggaactaccgagagtggtatgagaagttttacaagggctatgctgtcggcgctc
agcctcgacctccagtgaacagggagaacttttctccggacaggtttggtccgcctggga
ccagacgagagaattcaccgtatgctcggggccgtagggaggattatcctggtggacaga
gccacaggaatcgtagtatagctggaaattaccccgaaaaaccttccggaagggaaagcc
atggcatcaaagatcctacaaaatcgaaagagaaggaggtggaaaacccaatgggagatg
gcaaaggaaataaacataaaaagcaccggaagagaagaaaaggggatgagaacgaaggat
ttccgagtgctgagttgttagagggtgtgagaaagccaagagagccagttccatcagaag
acgttaaaacggacgctctgttcatgcttccgagcagagatgatgccactcccgtgagag
atgagcctatggaagcagattctatcgctttcaaaccggtgtccgagaaggagaaaaaag
agaaggacaagccaaaagcaaaaatggacaaaacaaagaggaaagtggaagtggccgttg
cccctaagaaagacgctgcagtaaaaccagctaaagctgcccaggagaaggtggacaccg
atcatgaaaaatctccccgaatagaaccccctgcgaaaaaattgaaggaggagttgccaa
agacagacagtgttaaaacgtcttcctctcaaaaggatgagaaggctcttggtaccccgc
ggaaagttcaccccaaagggacaaaagatcacccagaggccagaccagccaaggaggaga
aggcaaagaaagaccatccaaaagaacccaagtcggagaagccctccaacaaagaagaca
agtctaaaaaaactgctgaaaaaagcaaatcttctgatgccaaacctgaaaaaaggaaaa
ggaaagcggatgacaaggtcgataaagagcaggaaggcacttccgtaaaggcctctaaac
ccgacactgctgaatcgaaaacgtcgccgaaggggaagacggagcctgatggtgagagag
gagagcgaactccagagaaggataaatcgacttttcttaacaaccccgccaaaaagatta
aacttaaccgagaaactggcaaaaagattgtgagcggagaaaacgtgccacctgcgaaag
aacctgcggagaaacctgagccgagcagcagcaaagtgaaacaagaaaaaacgaagggca
aagtgagaagaaaagtaacagcagctgacggctccagttccactcttgtagattacacca
gcacgagttctaccgggggaagccccgttagaaagactgaagaaaagccagatacaaaac
gaactgtcattaagaccatggaggagtataacaacgatataacagcccctgctgaagacg
tcattattatgatccaggtccctcagtcaaagtgggacaaggatgactttgagtcggaag
aggaggacgttaaatcgacccaggtgcccacaagcataggaaaacctgctagtgttataa
aaaatgtgagtgcaaagccgccaaaccccctaaaacacaatgaaagagagatggaacctt
tggagaaaacacagaagactacaaaggagctgagttatgaaagctcccagcatgacacaa
aaagttcaaaaagttcgatgtcgaatgaaaaaggaaaaaccaaagaccgggatcattcgt
tgtcagacaaggacacttctgagaagagaaagagcagcgttcagccagaaaaagagcact
cggaacgtgcaactgaacaaggaagtggaaaaactatttctcagtcttctaaagagagca
ggtcttcagagaaacacgatactggccgtggatccgccacgaaagactttactcccaaca
gagacaaaaaatctgaccacgatggcaacagagatcactccagttccaagcggagagatg
aaaagagcgaattagcgaggagaaaggactccccttctcgaaacagagaacctgcagcag
tgcagaaaagcaaaccgagagacgagcgtgcagagccatccaaaaagggcgccggggaca
ccaaaaggagcagctacagccccccgcgcgagcggaagcagcagtcggagcacaaagctg
ctcacgactccaagcgcgcgtcggaggagcacaaacctccggataagactgcagggaaag
agaaggagaagcatgtcctggaggtaaagagcaataaagagaaagatccaggtggtaaca
aactgcctttgaaacaagaattgcccgatgtcaaaaatgagaaagagagcgtgacggcgc
cacctgagaagagcgttgtcaagcccaagcctcaggtcagcagctcctcgcggctctcct
ccgacctgacgagagagaccgacgaggcggccttcgtgccagactacaacgaaagtgaca
gtgagagtaatgtatctgcaaaagaggaggaagcggcgggaaaaactcctaaagaagcga
aagagaagagtgttgagaaggcgaaagaggaagcggcagcccctgccgcgaccgcgcagc
ccgaggcgagccgcagccagagccagagcagccccagcgtgagccgcagccgcagccaga
gcccttcggagagtcagactcggagccacagcagcagtgccagctcaggagagagccaag
acagcaagaaaaagaaaaagaagaaagagaagaagaagcacaagaagcataagaaacaca
agaagcataagaagcacgtcggaaccgaaacggaattggaaaagagccaaaaacacaaac
acaagaagaaaaaatcgaagaagagcaaagataaagagaaagatgaccaaaaagcgaaat
ctgtcgctacgtag

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