Apaloderma vittatum (bar-tailed trogon): 104277487
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Entry
104277487 CDS
T08559
Symbol
SIAH1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04115
p53 signaling pathway
avit04120
Ubiquitin mediated proteolysis
avit04137
Mitophagy - animal
avit04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104277487 (SIAH1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104277487 (SIAH1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104277487 (SIAH1)
09143 Cell growth and death
04115 p53 signaling pathway
104277487 (SIAH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
avit04121
]
104277487 (SIAH1)
Enzymes [BR:
avit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104277487 (SIAH1)
Ubiquitin system [BR:
avit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104277487 (SIAH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
104277487
NCBI-ProteinID:
XP_009872430
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MTGRSASSSLYSWKGVLCACLPGSKNSEAKEMSRQTATALPTGTSKCTPSQRVPALTGTT
ASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEK
VANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLM
HQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIV
QLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAE
NGNLGINVTISMC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacggggagatctgcctccagctctctgtattcatggaagggagtcttgtgtgcgtgc
ttgccgggaagtaaaaacagcgaggcgaaagaaatgagccgtcagactgccacagcactc
cccacaggtacttccaagtgcacgccatcacagcgggtgcctgccctgactggcactaca
gcttccaataatgacttggctagtctctttgagtgtcctgtgtgctttgactatgtgctg
ccaccaattcttcagtgtcagagtggtcatctggtttgtagcaactgtcgccctaaactc
acgtgctgtccaacttgccgaggcccgctgggctccatccgtaacctggctatggagaaa
gttgccaattctgtactattcccatgtaaatatgcctcttccggatgcgagataactttg
ccacacacagaaaaagcagaccatgaggagctgtgtgagtttaggccttactcctgtccg
tgtcccggtgcttcgtgtaaatggcaaggctctctggatgctgtaatgccacatttgatg
catcaacacaagtcaattacaacacttcagggagaagatatagtattccttgctacagac
attaatcttcctggtgctgttgactgggttatgatgcagtcttgttttggctttcatttc
atgttagtattggagaaacaggagaagtatgatggtcaccagcagttctttgcaattgta
cagctgataggaacacgcaagcaagcagaaaactttgcttatcgactcgagttaaatggt
cataggcggcgattgacttgggaagcaactcctcgatctattcatgagggaattgcaaca
gccattatgaatagtgactgtctagtctttgacaccagcattgcacagctctttgcagaa
aatggcaatttaggcatcaatgtaactatatccatgtgttga
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