Apaloderma vittatum (bar-tailed trogon): 104277501
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Entry
104277501 CDS
T08559
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03440
Homologous recombination
avit03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104277501 (TOP3B)
03460 Fanconi anemia pathway
104277501 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avit03032
]
104277501 (TOP3B)
03400 DNA repair and recombination proteins [BR:
avit03400
]
104277501 (TOP3B)
Enzymes [BR:
avit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104277501 (TOP3B)
DNA replication proteins [BR:
avit03032
]
Eukaryotic type
DNA Topoisomerases
104277501 (TOP3B)
DNA repair and recombination proteins [BR:
avit03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
104277501 (TOP3B)
FA (Fanconi anemia) pathway
104277501 (TOP3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
104277501
NCBI-ProteinID:
XP_009872449
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
LFFYPVETCDLIFAGNMSSRKGLNAACSVHEYTGSFIGQSAHFKMTSVCGHVMTLDFIGK
YNSWDKVDPAELFSKAPTEKKEANPKLTMVKFLQVEGRGCDCIVLWLDCDKEGENICFEV
LDAVLPVMNKPRGTERTIYRAKFSSITDTDICNAMNHLGEPNRNEALSVDARQELDLRIG
CAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNP
EKETSLTLDWDRVRVFDREIAQMFLNITKMAKEAKVESVSKKEKVKQRPLALNTVEMLRV
ASAALGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGCLRQQANNPYWAETVKA
LLSEGINRPRKGHDAGDHPPITPMRAATEAELGGDGWRLYEYITRHFIATVSADCKYLQT
TISFSIGPERFTCIGKVVTSPGFTEVMPWHSIPLEESLPHCEKGDLFPIGEIKLLEKQTN
PPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNLGIVLVHGYY
KIDAELVLPTIRSAVEKQLNLIALGKANYHQVLEHTLDIFKRKFHYFVDSIAGMDELMEV
SFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDDTYSLPQNGTIKLYKELRCPLD
DFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSMLGIGQCVEC
ENGVLVLDSTSGPKWKMACNKCNVIVHFFENAHKVRVSPETCDVCDAALVDVDFNKAKSP
LPGDETQHSGCVFCDPVFQDLVELKHAAMRHPMHRGGQGKRQGRGRGKGRRPGGRLNPKK
PKDKMAALAAYFV
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
ttgtttttttatcctgttgaaacttgtgatcttattttcgcaggaaacatgtcgtctcgc
aagggactgaatgctgcgtgctctgtgcacgagtacacgggatcgtttataggacagagt
gcccatttcaagatgacgtctgtgtgtggtcacgtcatgactttggatttcataggaaaa
tacaacagctgggacaaagtggatccagcagaactttttagcaaagctcccacagaaaag
aaagaagctaatcccaaactgaccatggtgaagtttttacaggtggagggaagaggctgt
gattgtattgtcttgtggctggattgtgataaggaaggagaaaacatctgttttgaagtt
cttgatgctgttcttcctgttatgaacaaacctcgtggcaccgaaaggacgatttataga
gctaaattcagttctatcactgacacagacatctgcaatgccatgaatcacttgggagaa
cccaaccgcaacgaagctctttccgtggatgcccgccaggagctggatcttagaattggc
tgcgcatttacaaggtttcagactaaatattttcaggggaaatatgggaatttagacagt
tccctcatctcctttgggccatgtcagacgccaacacttggattctgtgttgaaaggcac
gacaaaatccagtcatttaagcctgagacttactgggtgttgcaggctaaagtgaaccct
gaaaaagaaacctctctcactttggattgggatagagtaagggtgtttgatcgtgagatt
gctcagatgttcctgaatataacaaagatggcaaaggaagcaaaggtagaatctgtgagt
aaaaaagagaaggtgaagcagagaccactggctctgaacacggtagaaatgctacgagtg
gccagtgctgctttaggaatgggtccacaacatgccatgcaaatagcagagcgtctctat
acgcagggttatattagctaccctcgaacagaaactacccattatccagaaaactttgat
ttgaaaggatgtttgagacaacaagccaataatccttactgggcagaaactgtgaaagca
ttgctgtcagaaggcattaatcgtcccaggaaaggccacgatgcaggagaccatcctccc
atcacccccatgagagctgcaacagaagcagaattaggtggagatggatggcgactctat
gagtacataaccaggcatttcattgccactgtcagcgctgattgcaagtacctacagacc
accatttctttcagtattggccctgaacgttttacctgtattggaaaagtagtaacttca
ccagggttcacagaagttatgccatggcacagcatcccgttggaagagagccttccccac
tgtgagaaaggagatctttttccaattggtgaaataaaattgctggaaaagcaaaccaat
cctcccgattacctgacagaagcagagcttatcactctgatggaaaagcatggcattgga
actgatgcaagtattccagtccacattaacaacatttgccagcgaaactatgtcacagtg
gagagtggtcggagactaaagcctacaaacctcggcattgttttggttcatggctattac
aaaatagatgcagaattggttcttcctacaatccgcagtgctgtggagaagcaactcaac
ttaatagctctgggtaaagcaaattatcatcaggtcctggagcacacccttgacatattc
aaaaggaagttccactattttgtggattctattgcaggtatggacgagctgatggaagtg
tctttctcacccttagctgccacaggtaaacctctttcccgctgtggcaagtgccatcgt
ttcatgaagtatattcaggccaaaccaagtcgtctgcactgctctcactgtgatgacacc
tacagcctcccacagaatggtaccattaaactctacaaagagttgcgttgccccttagat
gactttgagctggtgctgtggtcatctggatccagaggaaagagttacccactctgccca
tactgttacaaccatcctcccttcagggacatgaaaaaaggaatgggctgcaatgaatgc
acccaccccacgtgccagcattctcttagcatgcttggaatcgggcagtgtgtcgaatgc
gagaatggggttctggtgctagactcgacgtcgggtcccaagtggaagatggcctgcaac
aaatgcaacgtgattgtgcatttctttgagaatgcccacaaagtccgagtgtcgccggag
acctgcgacgtgtgtgacgcagccctcgtggacgtagattttaacaaagccaaatctccc
ctacctggtgacgagacccagcattcgggctgtgtgttctgtgatccggtgtttcaagat
ctggtggagctgaaacacgcagccatgaggcaccccatgcaccgcgggggacaagggaaa
aggcaaggccgaggaagaggtaaaggccggaggcctggaggaagacttaatccaaagaaa
cccaaggacaaaatggcagctctggctgcttactttgtataa
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