Apaloderma vittatum (bar-tailed trogon): 104277512
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Entry
104277512 CDS
T08559
Symbol
PRDM16
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 16
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit00310
Lysine degradation
avit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104277512 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avit03000
]
104277512 (PRDM16)
03036 Chromosome and associated proteins [BR:
avit03036
]
104277512 (PRDM16)
Enzymes [BR:
avit01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
104277512 (PRDM16)
Transcription factors [BR:
avit03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104277512 (PRDM16)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104277512 (PRDM16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_6
zf-BED
zf-C2H2_jaz
zf-C2H2_11
zf-Di19
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
104277512
NCBI-ProteinID:
XP_009872466
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
PAPPAFPALTPGFPGIFPPSLYPRPPLLPPTQLLKSPLNHAPDAKLPSPLGNPALPLISA
VSNSNQXASGEEKCESSLENSYLEKLKARNSDMSDGSDFEDVNTTTGTDLDTTTGTGSDL
DSDAESDRDKAKDKSKQMESKPDFVSSSVSVSSTNSTSEIPLFYSQHSFFPPPEEHLLPT
TGAANDSIKAIASIAEKYFGPGFMGMQEKKMGSLPYHSMFPFQFLPNFPHSLYPFTERTL
NHNLLVKAEPKSPRDLHKVGSTSSESPFDLTTKPKEIKPILPPPKVLPAPASGEEQPLDL
SIGNRIRASQNGGREPRKNHIYGERKLMASEVLPKISQSQLPQQPSLHYAKPSPFFMDPI
YRVEKRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADTGTSLQPLPH
HPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRS
FSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENVPVSQHSGVITNH
LGTSASSPNSESDNHALLDEKEDSYFSEIRNFIANSEMNQASTLADKRPEIQDIDGNSQC
HGLANEKTEDVDDEDEELEEEDDDSLTGKSQDETVSPTAEPRGAFEDEEDEEPTSLTMSF
DHSRRCIEEDEAGLLDLEQMPNFGKGLDLRKAAEEAFEVKDVFNSTLDSETIKQTLYRQA
KNQAYAMMLSLSENAPLHASSQNSLGAWLDMAGAASESGTFNPINHL
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
cctgcccccccggcgttccccgccctcacgccgggattcccggggattttcccaccgtct
ctgtacccccggccccccttgttaccacccacgcaactactcaaaagtcccctcaaccac
gctccagacgcgaagctcccgagccccctcgggaacccggcgcttcctctgatctccgcg
gtgagcaacagcaaccagngcgcttcgggagaggagaagtgcgagagcagcctggaaaac
tcctacctggagaagctaaaagcccggaacagcgacatgtccgacggcagcgactttgag
gatgtcaacacaaccaccggcacggacctggacaccactactggcaccggctccgatctg
gacagcgatgcggagagcgacagggacaaagcgaaagacaagagcaaacagatggagagc
aagccagactttgtcagcagctccgtgtctgtgagttccaccaacagcacgagtgagatc
cctctcttctattctcagcattccttctttcctccccccgaagagcacctgctccccacc
acgggagcagccaatgactctattaaagctattgcctccatcgcggagaaatattttggg
cctggctttatggggatgcaggagaaaaagatgggttcgctcccgtatcattccatgttc
ccctttcagttcctccccaacttcccccactcactctaccctttcacggagcgcaccctc
aaccacaacttgctggtcaaggcagaaccaaagtcacccagggacctccacaaagtgggc
agcaccagctcagagtcgccttttgatctcaccacgaagccaaaagagattaagccaatc
ttgccgccgccgaaggtcctgccagccccggcctcgggggaggagcagccgctggacctg
agcatcggcaaccgcatccgagccagccagaacggaggaagagagccacggaaaaaccac
atttatggggagaggaagctaatggcaagtgaagtcttacccaagatttcccagtctcag
ctgcctcagcagccatccctgcattacgctaagccatcgccctttttcatggaccccata
tacagggtggagaagcggaaggtgacagaccctgtgggtgccctaaaggagaagtacctg
cgaccctccccgctgctttttcacccccagatgtcagccatagaaacgatgacagagaaa
ctggagagttttgcggccatgaaggcagacacgggcacttccctgcagccccttccccac
caccccttcaacttccgatctccgccacccacgctctccgaccccatcctgcgcaagggc
aaggagcgttacacctgcaggtactgtggtaagatcttcccacgctcagcaaacctgacg
aggcacctgcggacacacaccggggagcagccctacaggtgtaaatactgtgacaggtca
ttcagcatttcctccaacctccagcggcacgttcggaacatccataacaaggagaagcca
ttcaaatgtcacctgtgtaaccgatgctttgggcagcagaccaacctggaccggcatctt
aagaaacatgaacacgagaacgttccagtgagccagcactctggagtcattaccaaccac
cttgggaccagtgcctcttccccaaactcggaatcagacaaccatgcacttttagatgaa
aaagaggattcgtatttctctgaaatcagaaattttattgcaaatagtgagatgaatcaa
gcgtcaactttagcagataaaaggccagaaattcaggacatagatggcaattcccagtgt
cacgggttagcaaatgagaaaacagaagatgtggatgatgaagacgaagaactggaagag
gaagatgacgacagcctgacagggaagtcacaggatgagacggtctcacccaccgcagag
ccccgaggagcgtttgaggatgaggaagatgaggagcccacatctctcaccatgagcttt
gaccacagccgaaggtgtattgaggaggacgaagccggcttgttagatttggagcagatg
ccgaattttgggaaggggctggatcttcgcaaagcagccgaggaagcgtttgaagttaaa
gatgtgtttaattccaccttagactctgagacaataaaacagactctgtacaggcaggct
aaaaaccaggcttatgcaatgatgctgtccctgtctgagaacgctcccctccacgcgtcc
tcccagaactcgctgggtgcttggttggacatggcaggagcagcttcagagtcggggacc
tttaaccccatcaaccacctctga
DBGET
integrated database retrieval system
