Apaloderma vittatum (bar-tailed trogon): 104277519
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Entry
104277519 CDS
T08559
Symbol
NCOR1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
104277519 (NCOR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
avit01009
]
104277519 (NCOR1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avit03036
]
104277519 (NCOR1)
Protein phosphatases and associated proteins [BR:
avit01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104277519 (NCOR1)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
104277519 (NCOR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
DUF4798
Motif
Other DBs
NCBI-GeneID:
104277519
NCBI-ProteinID:
XP_009872475
LinkDB
All DBs
Position
Unknown
AA seq
2443 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRYPAHSVQYTFPSTRHQQEFAVPDYRSSHLEVSQATQLLQQQ
QQQQQQLRRRPSLLSEFHPGSDRPQERRTGYEQQFHPGPSQTDHDSLESKRPRLEQVSDS
HFQRVSAAAVLPLVHPLQEGLRSADIKKDPAFGGKHEGPSSPISGQPCGEDQNASPSKLS
KEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPERPVSPPPVEQKHRSIVQ
IIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRN
HARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQE
RFQRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKF
INMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERKNVPDCVLY
YYLTKKNENYKALVRRNYGKRRGRNQQQIARPSQEEKVEEKVEEEKAEKSEKKEEEKKDE
EEKDEKEESKDNTKEKDKAEVAPEETEEREQAAPRGRKTANSQGRRKGRITRSMTNEAAQ
ANAAAAAAAEEPPPPLPPPPEPSSAEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVG
TKSEAQCKNFYFNYKRRHNLDSLLQQHKQKSSRRPREERDVSQCESVASTVSAQEDEDIE
ASNEEENPEDSEAEAAKPSEETPSESAASKVTTEATAEPESTVNKPATSTSPSLTAESVS
TAESQNPEPQVKEEINNETEEPMEVDSRSHPVEAKPVITLPVHTKVEPVETEMRLPENIQ
VKIESDTKEREMEKPKEKSEPEEMDYSLSQQVNTSRQESHSDNDSSATCSADEEVDGEPD
RQGIFSRESKPSLLNPTGSILVSSTIKQGQMDLQQLHHRAAVIPPMVSCSPCTVPVGTPV
SGYALYQRHIKAMHESALLEEQRQRQEQLDMEYRSAVSPCGTSKSPNVEWEVLQPAPHQV
ITNIPEGVRLPTTRPTRPPPPLIPSSKTSVPSEKPSFIMGGSISQGTPGTYLTSHSQASY
TQETAKPSVGSISLGLPRQQESAKSASLPYIKQEEFSPRSQNSQPEGLLVRAQHESVVRG
TATIQEGSITRGTPTSKVSVETIPSLRGSITQGTPALSQSGIAADALLKGTITRLATEDS
SPEKCREEASAKGHVIYEGKSGHILSYDTIKNVREGTRSPRTAHEIGLKRSYDTMEGNIK
QGMSMRESPVSAPLEGLICRALPRGSPHAELKERTVLSGSIMQGTPRATAESFEEGLKYP
KQIKRESPPIRTFEGAITKGKPYDGVTTIKEMGRSIHEIPRQDLLSQESRKTPEMVQTTR
PIIEGSISQGTPIKYESNSGQSAIKHNVKSLITGPSKLPRGMPQLEMVPENVKVVERGKY
EDVKTGDAVRSRHTSVVSSGPSVLRSTLHETPKSQLSPGIYDDTNARRTPVNYQSPMSRS
SPMMNRVSEAGISSGKPVNHERKNTLTPTQRESVPAKSPVPGVDPVVAHSPFDPHHRGAT
PEVYRSHLPPHLDPAMPFHRALDPAAAAYLFQRQLSPTPGYPSQYQLYAMENTRQTILND
YITSQQMQVNLRPDVTRGLSPREQTLALPYAGARGIIDLNNMAPTILVPHPGGTSTPPME
RITYIPGTQLTFPPRPYNPASLSPGHPTHLAASAARERERERERERERERERIATVPAEL
YLRPGTEQPGRPGSHGYVRSPSPSVRSQENILQQRPSIFQGTNGTSVITPLDPAAQLRIM
QLTPGAPSITQGLPASRYNTAADALAALVDAAASAPQMEVSKAKENKHEGTRIEENMGRR
SAVVTEQQQMEQKTLEVEKRPVQCPYTSANFSGGKSQGQPSSVVYSEAGKEKGPPPKSRY
EEELRTRGKTTITAANFIDVIITRQIASDKDARDRGSQSSDSSSSLSSHRYEAPGDAIEV
ISPANSPVPAQEKLQPYQQETPKPSQAENDPNRQYEGPIHRYRTQQEPPSPQQPPPPSSQ
AEGMAHVPRTHRLITLADHICQIITQDFARNQAASQASLQPPTTTFQNSTPAPTPVSTRA
KTSNRYSPESQSQSVHHQRPGARVSPENLSDKSRGRPGKSPERSHVSSEPYEPISPPQVP
VVHEKQENVILLSQRTEPTEQRTDSRSPGSISYLPSFFTKLENTSPMVKSKKQEIFRKLN
SSGGGDSDMATAQPGTEIFNLPAVTTSGAVSSRGHSFADPASNLGLEDIIRKALMGNFDD
KSEEHGVVMSQSIAVAPGSSNAPVAASNETRREEANPSPNSGGVSKQKLIGKSNSRKSKS
PIPGQGYLGTERPSSVSSVHSEGDYHRQTPVWAWEDRPSSTGSTQFPYNPLTMRMLSSTP
PTSIACAPPSMSQATTHQQNRIWEREPAPLLSAQYETLSDSDD
NT seq
7332 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggctaccctcctaaccaaggggcgttcagcacggaacagagccgctac
cccgctcactctgtccagtacaccttccccagcacgcgacaccagcaggaatttgcagtt
cccgattatcgctcgtctcacctggaagtcagtcaggcaacccagctcttgcagcagcag
cagcaacagcagcaacaacttcggcgcaggccttccttgctttctgaatttcacccgggc
tctgacaggcctcaggaaaggagaactggatatgaacagcaatttcatccaggtccgtct
cagacagatcatgattcactggaatctaagcgaccacgtcttgaacaagtctctgattcc
cattttcagcgtgttagtgcagctgctgtcttgcctttagtacatcctctgcaggaaggg
ttgagatctgcagatattaagaaggacccggcttttggaggaaagcatgagggaccatct
tctccaatttctggtcagccttgtggggaggaccaaaatgcttcaccttcaaagctgtca
aaggaagaattgatacagagcatggaccgtgtagatcgtgaaattgcgaaagttgaacag
caaatccttaaactgaagaaaaagcaacaacaacttgaagaagaagctgctaagcctcca
gagccggagaggcctgtctcccctcctcccgtggaacagaaacaccgcagtattgtccaa
attatttacgatgaaaatcggaaaaaagcagaggaagctcacaagatttttgaaggcctc
ggtccaaaagttgaactgccgctttacaaccaaccatcagacacaaaggtctaccatgaa
aacatcaaaacaaaccaggtgatgaggaaaaagctaatactgttctttaaaagaagaaat
cacgcaagaaaacaacgggaacagaaaatctgtcaacgttatgatcagctgatggaggca
tgggagaaaaaagttgacaggatagaaaataatccacgcaggaaagcgaaggagagcaaa
acaagagagtactatgaaaaacaatttccagaaatccggaaacaaagagaacagcaagaa
cgattccaaagggttggtcagagaggggctggactttcagcaactattgctagaagtgaa
catgagatctctgaaatcatcgacggactttctgagcaggagaataatgaaaaacaaatg
cgccagctctctgtcattcctcccatgatgtttgatgcagaacaaagacgagtgaagttt
attaatatgaatggtctgatggaggatcccatgaaagtttataaagacaggcagttcatg
aatgtctggaccgaccatgaaaaagagatttttaaggaaaagtttgtccaacatcccaag
aactttggtctaattgcttcctacctggaacgaaagaatgttcccgactgtgtattatat
tattatttgaccaagaaaaatgaaaattataaagcccttgtgcgaaggaattacggtaaa
cgcagaggaagaaaccagcaacaaattgctcgtccttctcaagaagaaaaggtagaagaa
aaggtagaagaggaaaaagctgaaaaatcagagaaaaaagaggaggaaaagaaagatgag
gaggaaaaggatgagaaagaggaatctaaagacaataccaaagaaaaggacaaagctgaa
gttgcacccgaggaaacagaggaaagggagcaggccgctcctaggggccgaaaaactgcc
aatagccaaggtcgtcgtaagggcaggatcaccagatcgatgacaaatgaagctgcacaa
gcaaacgctgctgcagctgcagccgctgaagaacctcctccgcctcttccacccccacca
gaaccttcttctgcagaacctgtggagacatcccgctggacagaagaagaaatggaagtt
gctaagaaaggtctagtggaacatggacgaaactgggcagcaatcgccaaaatggttggg
acgaaaagtgaagctcagtgtaagaacttctatttcaactacaaaaggagacacaatctg
gacagccttctccaacagcacaagcagaagtcttcacgaaggccccgcgaggagcgagat
gtgtcacagtgtgagagtgtagcttcaactgtatcagctcaggaagatgaagatattgaa
gcatctaatgaagaagagaatccagaagacagtgaagcagaagctgcaaaaccaagtgaa
gaaactccatctgagagtgctgcttcgaaagtaaccactgaggcaacagcagaaccggaa
tctacagttaataaacctgcaaccagcacatctccctccttaacagccgaaagtgtatca
acagctgaaagtcagaaccctgagccacaggttaaggaggaaataaataacgagacagaa
gagccaatggaggttgacagtagaagccatccagttgaagccaagcctgtgattactctt
ccagtgcataccaaagtagaacctgtagagactgaaatgaggctaccagagaatattcaa
gtgaaaatagagagtgataccaaagagagagagatggagaaacccaaggagaagtcagaa
ccagaggaaatggactatagtctgtcacaacaagttaatacatcaagacaagaatcccat
tcagataatgattcgagtgccacctgcagcgctgatgaggaagttgatggagaacctgac
agacaaggtatcttcagcagggagtcaaagccgtcccttttaaatcctactgggtcaata
ctggtatcatccacgataaagcaagggcaaatggacctgcaacagcttcaccaccgagct
gctgtcatcccacctatggtttcttgcagtccctgcactgtccccgttggaacaccggtg
agtggttacgcgctgtatcaacggcacattaaagccatgcacgagtcagcgctgctggag
gagcaacgccagaggcaagagcagctggacatggagtatcgaagtgctgtaagcccttgt
ggcacttccaagagccctaatgttgagtgggaagttctccagccagcacctcaccaagta
ataaccaacatacccgaaggagtccgccttccaacaaccagacctactagaccaccgcca
ccgctcattccctcctccaaaacgagtgtgccatccgaaaaaccttccttcatcatggga
ggctcaatctcacaaggaacacctggcacttacttaacatcccatagccaagcttcttac
acccaagaaactgcaaagccctcagtgggttctatctctctcgggctgccaaggcagcag
gagtcagccaaatctgcttccctgccctatatcaaacaagaagaattctctcccagaagc
cagaattctcaacctgagggactgctggtcagggcacaacatgaaagtgtggttcgaggt
accgcaaccatacaggagggaagtataacacgaggaactccaaccagtaaagtttctgtt
gagaccattccttctttgagaggctccataactcagggtacaccagctctgtcccagtct
ggcatagcagcggatgcattattgaaaggaactatcacccggctggctacagaagacagc
agcccggaaaaatgcagagaagaagcttcagccaaaggccacgttatctatgaaggcaaa
agtgggcatattttatcttacgatactattaaaaatgttcgtgaaggaacaaggagccca
agaactgctcatgaaattggtttgaagagaagttatgatacaatggaaggaaatatcaag
caaggaatgtcaatgcgggagtctccagtgtctgcgccgctggaaggtttaatatgccgt
gcactgcctaggggtagcccccatgctgaactaaaagagagaacagtgttgtctggctct
ataatgcaaggcacaccaagagcaacagcagaaagttttgaagaaggcttgaaataccct
aaacagattaagagggagtcacctcccataaggacatttgaaggagccattactaagggg
aaaccgtacgacggagtcaccaccataaaagaaatgggtcgttccatccatgaaatccca
agacaagacctcttaagccaggagagtcgcaagactcctgagatggtgcagacgaccagg
ccaatcatagaaggctccatatctcagggcacacccataaaatatgaaagcaactctggc
cagtctgccatcaaacacaatgtaaaatctttaatcactggaccaagcaagttaccccgt
ggaatgcctcagctggaaatggtgccagaaaacgtgaaggtggtggagcgaggaaaatat
gaagatgtgaagaccggggatgccgtacgttcccgtcacacgtcagtagtcagctctggt
ccctctgttctcaggtcaactcttcatgaaactcccaaatcacagctgagccctgggatt
tatgatgataccaatgctcggagaacacctgtgaactatcagagtcccatgtcccggagt
tcacctatgatgaatagagttagtgaggctggaatatcttctgggaagccagtaaatcac
gaaaggaaaaacacccttactccgacgcagagggagagcgtgccagcaaaatctccggtc
ccgggggttgatcctgtcgtggctcacagtccttttgacccgcatcacagaggagcaact
cctgaagtctataggagtcacctccctcctcatttagatcctgctatgccatttcacagg
gctctggatcctgctgctgctgcttacctgttccaaagacagctctcacccaccccaggc
tacccaagtcagtatcagctttacgccatggagaatacacgacagacaatcctaaatgac
tacattacctcacagcagatgcaagtcaatttacgtcctgatgtaacgagagggttatct
cccagagagcaaactttagctctgccgtatgcaggagcaagaggaattattgacctgaac
aatatggctcccactatcttagtgcctcaccctggaggaacaagcacaccacccatggag
aggattacgtatatccctggtacccagctcacgttccctcccaggccttacaatcctgct
tcgctgtcaccaggacaccctacacacctggcagcttctgcagctagggaacgtgagcga
gagcgggaaagagaacgagagcgagagcgggagagaatagctacagttcctgctgagctt
tatcttcgaccaggtacagagcagcctggcagacctggcagccatggatatgttcgatcc
ccatccccttcagttagaagccaggagaacatcctgcagcaaaggccgagtatttttcaa
ggaaccaatgggacaagtgtaatcacacctttggatcctgctgcccagctacgtatcatg
cagctcactcctggagctccctccattactcaagggttaccagcttcccgttacaatact
gctgctgatgcccttgcagcactagtagatgctgcagcctctgctcctcagatggaagtt
tccaaagcaaaagaaaacaagcacgaaggaaccaggatagaagaaaatatggggcgccgg
tcagctgtggttactgagcagcagcagatggaacagaagacactggaggtagaaaagagg
cctgtccagtgtccctatacatctgcaaatttttctggtggcaagtcccagggacagcct
tcatcagtagtctattcagaggctggtaaagagaaagggcctcctcctaaatccaggtac
gaggaagagctgagaactcgaggaaagaccacaattactgctgctaacttcatagatgtg
atcatcactcgacagattgcttcagacaaggatgcacgagataggggctctcaaagttca
gattcttccagtagtttatcctcccaccggtatgaagctcctggagatgccattgaggtg
attagccctgcaaattcacctgtacctgctcaagaaaagctacagccctatcaacaggag
acacctaaaccaagccaggcagagaatgacccaaacaggcaatatgaggggccgattcac
cgctataggacacaacaggaacccccttcaccccagcaacctccacctccctcttcccaa
gcagaagggatggcacatgtgcccaggacccatcgacttatcacccttgctgatcacatc
tgtcaaattattacacaagactttgctagaaaccaagcagcttctcaggcctctttgcag
cctcccaccactacattccagaattccacccctgctccaacgcctgtttctacccgggca
aagacatcaaatcgctacagccctgagtcacagtcacagtctgtccaccatcagcggcca
ggtgccagagtgtcacctgaaaacctctctgacaagtccaggggaagacctggaaaatct
ccagagaggagtcatgtctcttcagagccctatgagccaatctcgccacctcaggtcccg
gttgtacatgagaaacaggaaaatgttattttgctttcccaaagaactgagcctactgaa
cagaggactgactctcgctctccaggtagtataagctacctgccttcgtttttcaccaaa
cttgagaacacttcacccatggtaaaatccaagaaacaggagatatttcgaaagctgaac
tcatctggtggaggtgactctgacatggcaactgctcagccagggactgaaatattcaat
ttgccagcagtcactacctcaggtgcagtgagttctaggggtcattcctttgcagatcct
gccagtaatctgggtctggaagacattattaggaaagcattgatgggaaactttgatgac
aagagtgaggagcatggagtagtaatgtcacaatctattgcagtagcacctggtagttcc
aatgctccagtagcagcaagtaatgagacgcgtagggaagaagctaatccatcaccaaat
tcagggggagtcagcaagcagaagctgatcggcaagtcaaatagtaggaagtcaaagtct
ccaattcctggacagggatatttgggaaccgaaagaccttcttctgtctcatctgtacat
tcagaaggggattaccacagacagactccagtgtgggcctgggaagacaggccttcatca
acaggttcaacgcagtttccttacaacccattgacgatgaggatgctgagcagcacgccg
ccaacatccatcgcgtgtgccccaccgtccatgagccaagcaaccactcaccaacagaac
aggatatgggagcgagagcctgcgccactgctttcagcacaatacgagactctgtctgac
agtgatgactga
DBGET
integrated database retrieval system
