Apaloderma vittatum (bar-tailed trogon): 104277540
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Entry
104277540 CDS
T08559
Symbol
RUNX1
Name
(RefSeq) runt-related transcription factor 1
KO
K08367
runt-related transcription factor 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104277540 (RUNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avit03000
]
104277540 (RUNX1)
Transcription factors [BR:
avit03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
104277540 (RUNX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RunxI
Runt
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
104277540
NCBI-ProteinID:
XP_009872504
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
VVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTI
TVFTNPPQVATYHRAIKITVDGPREPRRHRQKIDEQTKPGSLSFSERLSELEQLRRTAMR
VSPHHPAPTPNPRASLNHTTAFNPQPQSQIQDTRQVQPSPPWSYDQSYQYLGSIATPSVH
PATPISPGRASGMTSLTAELSSRLSSASDLTAFSDPRVGIDRSFSTLPSISDPRMHYPGA
FTYTPTPVSSGIGIGMSAMSTATRYHTYLPPPYPGSSQAQGSPFQTTSPSYHLYYGTSAG
SYQFSMISGGDRSPPRIHPPCTNASTGSTLLNPNLPNQSDVVEAEGSHSNSPTNMATTGR
LEEAVWRPY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
gtggttgccttgggagatgttcctgatgggacactggtaacagtgatggctggaaatgat
gaaaactactctgcagaactcagaaacgccacggctgccatgaaaaatcaagtagcaagg
ttcaacgaccttcgattcgtgggtagaagtggaagagggaaaagcttcacactgactatc
acggtcttcacaaatccaccgcaagtagccacatatcacagagccatcaagataacagtg
gacggacctcgcgaacccagaagacatcgtcagaaaatagatgagcagacaaagcccggg
agcttgtccttttcagagcgcctgagtgaactggagcagttgcgtcgtacggccatgagg
gtcagcccacaccacccagcccccacacccaacccacgagcctccttgaaccacaccact
gcttttaaccctcagcctcagagtcagattcaggacacgaggcaagtacagccatctcca
ccatggtcctacgaccagtcctaccagtacctgggctccattgccaccccctccgtgcac
cccgccacaccaatatcacccggcagggctagcggcatgacatccctcaccgcagagctt
tcaagccggctgtcaagtgcttctgacctgactgccttcagtgacccccgggtgggaatc
gaccgctccttctccacgctcccctcaatctctgaccctcggatgcactacccgggagcg
ttcacctacacgccaacgcccgtcagttcagggataggaatcggtatgtctgccatgtcc
acggccacgagataccacacttacctcccacctccctaccctggctcctcacaggcccag
ggcagcccgttccagaccacgtcaccctcctaccacctctactacggaacctccgccggc
tcctatcagttctccatgatctcggggggagaccggtccccgcctcgcatccaccctccc
tgcaccaacgcctccacgggatcgacgctcctcaaccccaacctccccaaccaaagcgac
gtggttgaggcagaagggagccacagcaactcccccaccaacatggcaaccacagggagg
ctagaggaagcagtgtggcgaccatactga
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