Apaloderma vittatum (bar-tailed trogon): 104277605 Help Entry 104277605         CDS       T08559                                  Symbol SMARCC1 Name (RefSeq) SWI/SNF complex subunit SMARCC1   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism avit  Apaloderma vittatum (bar-tailed trogon) Pathway avit03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:avit00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     104277605 (SMARCC1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:avit03021]     104277605 (SMARCC1)    03036 Chromosome and associated proteins [BR:avit03036]     104277605 (SMARCC1) Transcription machinery [BR:avit03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      104277605 (SMARCC1) Chromosome and associated proteins [BR:avit03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     104277605 (SMARCC1)    PBAF complex     104277605 (SMARCC1)    GBAF(ncBAF) complex     104277605 (SMARCC1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 HEAT_GCN1 Chromo DUF919 SpeFL Motif Other DBs NCBI-GeneID:  104277605 NCBI-ProteinID:  XP_009872592 LinkDB All DBs Position Unknown AA seq 907 aa AA seqDB search GTVTEEKSKATHHVYPSPTSMDDDEWLRPVMKKDKQVLVHWGFFPDSYDTWVHANEIDAE IEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKSVSFRQRISMKNEEPVRSPE RRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAALYGKRRGQKEEDEQEDLTKDMED PTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVATGGKEDEDPNKGDQSR SIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNF MIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLINYQVDPESRPMAMGPPPT PHFNVLADTPSGLMPLHIRTPQVPAAQQMLSFPEKNKEKPTDLQNFGLRTDIYSKKTLAK SKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEN SDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLEL VEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKIDGAEEEKMETETDGQQSEKV ENKAETEMEEGDKTQEGENERNPEKEQESDVTADPKPEEKEAEENKENVDASKDKENETG KKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRH FEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQHSQNPQQPHQHS GGPGMNPLGAPAHPGLLPHQQPPPYPMMHHQMPPPHPPQPGQMPGPGSMIPGQPMPGRMM PSVSANIHPAGGGPPPPGMSPMPGNLIGPRVPLAAPNGMYPPPAQPPPPAEGVTPPPAGA PPASAAP NT seq 2724 nt NT seq  +upstreamnt  +downstreamnt ggaacagtaactgaagagaagtcgaaggctacccaccatgtttatccaagtcctacctca atggatgatgatgagtggttgagacctgtgatgaaaaaagacaagcaggtgctggtacac tggggcttttttcctgacagctatgacacttgggttcatgccaacgaaatagatgctgaa attgaggatcctccaattcccgaaaagccgtggaaggttcatgccaagtggattttggac acggatgtgttcaacgagtggatgaatgaagaggattatgaggtagacgagaacaggaaa tcagtgagttttcggcagcgaatctccatgaaaaatgaagagcctgtgcgtagcccggag aggagagacaggaaagcagcagcgagtacgaggaagagaaagcattctccttctccgccc cccactcctgtagagtcgagaaaaaagacagggaagaaaggacaagcagccttatatggg aagaggagagggcagaaggaagaagatgagcaagaagatcttacaaaggacatggaggat cccacgccagtacctaatatagaagaagtggtacttcccaaaaatgtgaacccaaagaaa gacagtgaaaacacgcctgtgaaaggaggaacagtagcagacctcgatgagcaggatgag gagacggtggcaactggaggaaaggaagacgaagatccaaacaaaggcgatcagagccgg tcgattgatccaggtgaagataacgtcacagagcaaaccaaccacatcattattccaagc tatgcatcttggtttgactacaactgtattcatgtgattgaacgtcgtgctcttcctgaa ttcttcaatgggaaaaacaagtccaagactccagaaatatacctggcttaccgcaacttc atgattgacacctatcgcttgaaccctcaagagtacttgaccagcactgcctgcagaagg aatctgaccggagatgtgtgcgctgtcatgagagtccatgcttttctggagcagtggggt ctcattaactaccaggtggatccagaaagccgtcccatggccatggggcctccccctact cctcacttcaacgtgctggcggatacgccctcggggcttatgcctctccacatccgcact ccgcaggttccagctgctcagcagatgttgagttttcctgagaaaaacaaagagaaacct actgatctgcagaactttggactccgcacagacatttactcaaaaaagactttagcaaag agtaaaggcgcaagcgctggaagagaatggacagagcaagagacgttgctgctattagaa gctctggagatgtacaaagatgactggaacaaagtctcggagcacgttgggagccgtacc caagatgagtgcattctccattttctgcgactccccatcgaagacccctacttggagaat tcggatgcatcccttggccccctggcttaccagcccgtacccttcagccagtccggcaac ccagtgatgagcaccgttgcttttctggcatcggtggtggatcctcgggtggcatcggcc gcagcgaaggctgcgttagaggaattttctcgagtcagagaggaggtgccgctggagctt gttgaagctcacgtgaagaaagtgcaggaagcagcaagagcctctgggaaggtggatcca acgtatgggctagagagcagctgtattgccggaacgggtccagatgagccggagaaaatc gatggagccgaagaagaaaagatggaaactgagacagatgggcagcagtctgagaaggtt gagaacaaagcggagactgaaatggaggaaggcgataaaacacaagagggagaaaatgag agaaatccagaaaaagagcaagagagtgacgtgaccgcagaccccaagccagaggagaag gaggcagaagagaacaaggagaacgttgatgcgagcaaagacaaagaaaacgagactggg aagaagaaagtggaacatgaaatctcggaaggaaacgtcgctacagctgcagctgctgcc ctcgcctcagctgccaccaaagcaaagcacttggcagcggtggaagaaagaaagatcaag tccctggtcgcccttctggtggaaacgcagatgaagaagctggagataaaacttcgccac tttgaggagttggaaaccattatggacagagagaaggaggcgctggagcagcagaggcag cagctgctgacggagcgccagaatttccacatggaacagctgaaatacgctgaactaagg gctcgccaacaaatggagcagcagcacagtcagaacccccagcagccccaccagcactca gggggtcccgggatgaatcccctgggagcaccagcacatccaggcttgctgcctcaccag cagcccccgccgtacccgatgatgcaccaccagatgccaccgcctcacccgccgcagcca ggtcagatgccaggacccggttcgatgatccctgggcagcccatgccgggccggatgatg ccgagcgtgtcggccaacatccaccctgccggcggcggtcctcccccacccggcatgtcg cccatgccaggaaatctcatcggacctcgcgttcctctggcagctccaaatggcatgtat ccccctccggcgcagccgcctccgcccgcggaaggggtgaccccacctccggccggagcc ccgccggcctcagccgctccctaa

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