KEGG   Apaloderma vittatum (bar-tailed trogon): 104277731
Entry
104277731         CDS       T08559                                 
Symbol
WDR7
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 7
  KO
K24738  rabconnectin-3b
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:avit00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    104277731 (WDR7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:avit04131]
    104277731 (WDR7)
Membrane trafficking [BR:avit04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    104277731 (WDR7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40 Beta-prop_THOC3 Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 ASA1 Beta-prop_WDR36-Utp21_2nd CFAP251_N Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta WDR55 Beta-prop_ACSF4 Beta-prop_EML EIF3I Beta-prop_IFT140_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st PAC11 DSE1_N Beta-prop_WDR41 Beta-prop_VPS8 WDR72_alpha-sol Beta-prop_SCAP Beta-prop_Aladin Beta-prop_HPS5 DNAI3_WD Beta-prop_DCAF4 Arminin
Other DBs
NCBI-GeneID: 104277731
NCBI-ProteinID: XP_009872773
LinkDB
Position
Unknown
AA seq 1098 aa
MAGNSLVLPIVLWGRRAPTHCISSLLLMEDASMIVTGCHDGQICLWDLSLDLEVNPRALL
FGHTASITCLSKASASSEKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFT
VGTQREGRLLCHGHYPEILVVDATSLEVLYSLLSKISPDWISSMTIIRSNRTQEDTVVAV
SVTGILKVWIITSEVSRLQDTTPVFEEESKPIYCQNCQSVSFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSVPSENDQTWTGGDFVSADKVIVWTEDGQSFIYKLPASCLPASDSFRRDV
GKAVENLIPPLLYSVLDRADKQLLICPPVTRFFCGLRELSYKLLIQGDSSGRLCIWSVPD
ALEQQGSAKGLQTTTSISLQEAFDKLTPRPAGIIDQLSLIPNLNEPLKVTASVYIPAHGR
LVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKITCLLYPHQVSSRY
DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMG
ITAVEILNACDEAVPATAPPXGHPAVNRKQAMTRRSLAALKNVAHQKLQTLATNLLASEA
SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENL
QKASGGADKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEDEDEDSIRQRREDGDPEY
RSSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNAVLDELCLDRLGMLKPHCSVSFGLLSR
GGHMSLMLPGYNQPMGKPSYDSTELGRKMSITEGLGKGTYGVSRAVTTQHLLSVISLANT
LMSMTNATFIGDHMKKGPTRPPRPGTPEMSKVKAAPSISSHAAQGQIKQVAPAVSSSTEA
GHSGSDTAPTLHTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEV
REAAQALLLAELRRIEQAGRKETIDAWAPYLPQYIDSVISPGVTTEAIQTGSASPDSLGT
EAKVQEEEHDLVDDDITA
NT seq 3295 nt   +upstreamnt  +downstreamnt
atggccgggaacagcctggtgctgcccatcgtgctgtggggccgccgagcgcccacgcac
tgcatctcctccctgctgctcatggaggacgcctccatgatcgtcacgggctgccacgac
gggcagatctgtctctgggacctgtctctggatttagaggttaatcctagagccctgctg
tttggccacacagcctcaattacttgtttatccaaggcctctgcctccagcgaaaagcag
tacatagtgagcgcgtcggagagcggggagatgtgtctgtgggatgtgaatgatgggaga
tgcatagagtttacaaaacttgcctgtacacacactggcatacagttctatcagtttaca
gttggaactcagcgtgaagggaggctactgtgccatgggcattacccagaaattcttgtt
gtggatgccactagccttgaagttctttattctctgttatcgaagatatctcctgactgg
atcagctccatgactatcattcgatccaacagaacacaagaggatactgtggtagcggtt
tcggtgactggcatcctcaaagtatggataataacctctgaagttagtcggctgcaggat
acgacgccggtgtttgaggaggagtcaaagcctatttattgtcagaactgtcaaagcgtt
tctttctgcgctttcacccagcggtcgctgttggtcgtgtgctccaagtactggagggtg
ttcgacgctggggattattccctcttatgttccgtccccagcgaaaacgatcagacctgg
actggaggcgactttgtgtcagccgataaagtgatcgtgtggacagaagatgggcaaagt
ttcatctataaattaccagccagctgtctcccagctagtgattcattccgcagagatgtg
gggaaagcagtagaaaatttaattccacctctattgtacagcgtgttggacagggcagat
aaacagctactaatatgtcctccagttactcgattcttctgtgggcttagggagctttcc
tacaagctgctgatccaaggagactcttcagggagactgtgtatttggagtgtgcctgac
gctctggagcagcaaggcagtgcgaaaggactgcaaacgacgacttcgatctccctccaa
gaagcttttgacaagctcactcctcgccccgctggcattatagaccagctgagcttgatc
ccaaacctcaacgaaccgcttaaagtcaccgccagcgtgtacatcccggcgcacgggcgg
ctggtttgcgggcgtgaggacggcagcatcgttatcgtgccggccacgcaaacggcgatc
gttcagctgctgcaaggagagcacatgctcaggagaggttggccacctcaccggacactc
cgaggccatcgcaacaaaattacatgtttactgtatcctcatcaggtttcttctcgttat
gatcaaaggtatttgatctcaggtggtgtggatttctcggtcatcatatgggatatattt
tctggagagatgaaacatatcttctgtgtacatgggggagaaattacccagctcctagtg
ccaccagaaaactgtagtgcaagagtccagcactgtatctgctctgttgccagtgatcac
tcagtaggtcttctgagcctgcgggagaaaaaatgcatcatgctggcatcccggcacctt
ttccctattcaagtgatcaagtggaggccttccgatgactacctggtggtgggctgctcg
gatgggtctgtgtacgtctggcaaatggatactggggcgctggacaggtgtgtgatgggc
atcacggccgtggaaatcctgaacgcgtgcgacgaggcggtgccggcgactgcgcccccc
nggggccaccccgccgtgaaccggaagcaggccatgaccaggcgcagcctggctgctctc
aagaacgtggcgcatcagaagctccagactcttgccactaacctcctcgcttccgaagcc
tccgacaaggggaatctacctaaatattcccataactccctgatggttcaggctatcaag
actaacttaaccgatccagacatacacgtgctcttcttcgacgtagaagccctgattatt
cagctcctgacagaagaggcctccagacccaacaccgcactcatctctccggagaatttg
cagaaagcctctggcggtgctgacaagggaggctcctttctgactggtaagcgagcagcc
gtcctcttccagcaggtcaaggaaacgatcaaagagaacataaaagagcatcttcttgat
gacgaagatgaggacgaagactcgataaggcagaggagagaagacggcgacccggaatat
cgctctagcaaatctaaaccgttgactttattagagtataatctaaccatggatacagca
aagcttttcatgtcctgccttcatgcctggggcctgaatgcggttctagacgagctttgc
ctcgatcgcctcgggatgctgaagccccactgctcggtgtccttcggcctcctgtctaga
ggaggccacatgtccctcatgctccctggctacaaccagcccatgggcaaaccgtcatac
gacagcaccgagttggggaggaaaatgtccatcacggaaggacttgggaaggggacgtac
ggcgtgtcccgggccgtcaccacgcagcacctcctgtccgtgatctccctggccaacacc
ctcatgagtatgaccaacgccacttttatcggagaccacatgaagaaaggtcccaccagg
ccacctcgaccaggcactcccgagatgtccaaagtgaaggcagccccttcgatttcaagt
catgcagcccaaggacaaatcaagcaagtcgctcctgctgtttcttctagcactgaagct
ggtcactctggctctgacactgctcctactttacatacctgtttcttagtcaatgaaggg
tggagccagctggccgccatgcactgcgtgatgctgcccgacctgctggggctggacaag
ttcagacctccccttctggagatgctggctcgcaggtggcaggatcgatgcttggaggtg
agagaagcggcccaggccctgctgctggcagaactgaggagaatcgagcaggcaggtcgg
aaagaaaccattgacgcgtgggcaccttatttaccccagtacatcgacagcgtcatctcg
cccggagtgaccacggaagccattcagactggcagcgcaagcccggactcgctgggaact
gaagcaaaagttcaagaagaggagcacgatctggttgacgacgacatcacagcag

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