| Entry |
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| Symbol |
RPA1
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| Name |
(RefSeq) replication protein A 70 kDa DNA-binding subunit
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| KO |
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| Organism |
avit Apaloderma vittatum (bar-tailed trogon)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:avit00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104277740 (RPA1)
03420 Nucleotide excision repair
104277740 (RPA1)
03430 Mismatch repair
104277740 (RPA1)
03440 Homologous recombination
104277740 (RPA1)
03460 Fanconi anemia pathway
104277740 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:avit03000]
104277740 (RPA1)
03032 DNA replication proteins [BR:avit03032]
104277740 (RPA1)
03400 DNA repair and recombination proteins [BR:avit03400]
104277740 (RPA1)
Transcription factors [BR:avit03000]
Eukaryotic type
Zinc finger
Cys2His2 others
104277740 (RPA1)
DNA replication proteins [BR:avit03032]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104277740 (RPA1)
DNA repair and recombination proteins [BR:avit03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104277740 (RPA1)
MMR (mismatch excision repair)
104277740 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
104277740 (RPA1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
569 aa
MSDGVNTLSSFMLATQLNPLVEEERLSAHCICQVNRFIVNSLKDGRRVVILMDVDVLETA
DIVGGNIGNPVPYNEGQGQQRSSAPAANPAPSKPPQPNGNLSTPGPAAPKYHAPSQFGKA
SAPSSAKTPGGSQAKVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSVELVD
ESGEIRATAFNDQADKFFPLIELNKVYYFTKGNLKTANKQYSAVKNDYEITFTNETSVVP
CDDAQHLPSVQFEFVSISDLENTPKDSIVDVIGICKSYEDVTKITVKANNREVSKRNVHL
MDTSGKLVTATLWGNEAEQFDGSRQPVVAIKGARVSDFGGRSLSVLSSSTVIINPDSPEA
FKLRGWFDSEGQLLECASISDVKGGPAAGASTNWKTLFEAKAENLGQGDKADYFSCVGTV
VHLRKENCMYQACPSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADCLEYQW
VTCFQESAEFILGQNATFLGELKEKNEQAFEEVFQNANFNTYEFRIRVKLETYNDESRIK
ATAVDVKPVNYREYSKRLIASIRRNAQLG |
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| NT seq |
1710 nt +upstreamnt +downstreamnt
atgagcgatggggttaacaccctctcctcattcatgttggcaacacagctgaaccctctg
gtggaagaggaacgcttatcagcccattgtatttgccaggttaacaggttcattgtcaac
agcttgaaagatggaaggagagtggtgatcctgatggatgtagacgttctggaaactgct
gatatcgttggggggaatattggcaacccagtgccgtacaatgaagggcaagggcagcaa
cgttcttcagctccagcagcaaacccagcacctagcaaaccaccgcaaccaaatggcaat
ttgtcaacaccaggtcctgctgctccaaagtaccacgctccctcccagtttggtaaagca
agcgctcccagctcagcgaagacaccggggggatcgcaggccaaagtggtgccgatcgcc
agcttgaacccgtaccagtctaagtggaccatttgtgctcgcgttacccaaaaaggccag
atccgcacgtggagcaactcccgtggtgaaggaaagctcttttctgtagagctggttgat
gaaagcggtgagattagagctactgcattcaatgatcaagcagacaaattctttccactc
attgaattgaacaaggtatattattttaccaaaggcaatttgaagactgctaacaagcaa
tattcagctgttaagaatgactatgagattacgttcactaatgagacttcagttgtgccc
tgcgatgatgcccagcatcttccatctgttcagttcgagttcgtatccatctctgacctg
gagaacacacccaaagactcaattgttgatgtaattggaatttgtaagagctatgaagat
gtcactaaaattacagtgaaagctaacaacagggaggtatcaaagaggaatgtgcatctg
atggatacgtcggggaaactggtgacagctacgctatggggaaatgaggctgaacagttt
gatggttctagacaacctgtggtagccatcaaaggagcccgagtctctgattttggtggt
agaagcctgtctgtcctgtcctcgagtacagttatcatcaaccctgatagcccagaggct
tttaagctccgaggatggtttgactccgaggggcagcttctagaatgtgcctcgatctct
gatgtgaagggtgggccagcagctggagccagcaccaactggaaaactttgtttgaagcc
aaagccgagaacttgggacaaggagataaggcggattattttagctgtgtgggcacagtc
gtacatctgcgcaaagagaactgtatgtaccaggcatgtccctctcaggattgcaacaag
aaagtgatagaccagcaaaacggactgtatcgttgtgaaaagtgcgatcgtgagttcccc
aacttcaagtaccgcatgatgcttctggtgaccattgcagactgtctagagtatcagtgg
gtgacttgtttccaagagtcagcagaattcattcttgggcaaaatgcaactttcttggga
gaactgaaggaaaagaacgagcaggcatttgaggaagtgttccaaaatgcaaacttcaac
acgtacgagttcaggatccgagtgaaactggagacttacaatgacgaatctcgtattaag
gctacagcagtcgacgtcaaacctgtgaactacagagaatacagcaagaggctgatcgca
agcatcaggagaaacgctcagctagggtga |
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