Apaloderma vittatum (bar-tailed trogon): 104278030
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Entry
104278030 CDS
T08559
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04120
Ubiquitin mediated proteolysis
avit04137
Mitophagy - animal
avit04144
Endocytosis
avit04340
Hedgehog signaling pathway
avit04350
TGF-beta signaling pathway
avit04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104278030 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104278030 (SMURF1)
04350 TGF-beta signaling pathway
104278030 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104278030 (SMURF1)
04137 Mitophagy - animal
104278030 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
104278030 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
avit04131
]
104278030 (SMURF1)
04121 Ubiquitin system [BR:
avit04121
]
104278030 (SMURF1)
03029 Mitochondrial biogenesis [BR:
avit03029
]
104278030 (SMURF1)
Enzymes [BR:
avit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104278030 (SMURF1)
Membrane trafficking [BR:
avit04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
104278030 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
104278030 (SMURF1)
Ubiquitin system [BR:
avit04121
]
Ubiquitin ligases (E3)
HECT type E3
104278030 (SMURF1)
Mitochondrial biogenesis [BR:
avit03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104278030 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
104278030
NCBI-ProteinID:
XP_009873177
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
LCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSITIS
IWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPTDTDAVRGQIVVSLQT
RDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPAPYTDTTGAAGGGNCRFVES
PSQDQRLQAQRLRTPEVRGHVQTPQNRPHGHQSPDLPEGYEQRTTVQGQVYFLHTQTGVS
TWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQ
CQLKEPSQQPLPAPNEGSLEDGEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIEVS
REEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQ
YSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQ
LSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNIPVTEENK
KEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLNDWK
SNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGAAGPRLF
TIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2135 nt
NT seq
+upstream
nt +downstream
nt
tattatgtgccaagaatctcgcaaagaaagatttcttcagacttcctgacccctttgcaa
aaatcgtcgttgatgggtcaggtcagtgccattcaactgacactgtgaagaacacactgg
accccaaatggaaccagcattacgatctatacgttggcaagacagattccataaccatca
gcatatggaaccataaaaaaatccacaagaaacagggagctggcttcctggggtgtgtcc
gactcctctccaatgccatcagcaggctaaaagatactggataccagcgtttggatctat
gcaaattaaatcccacagataccgatgctgtacgaggccagatagtggtcagtttacaga
cacgggacagaataggcacaggaggttctgtagtagactgtagagggcttctggagaatg
aaggaacggtttatgaagattccggaccaggaaggccgctgagctgttttatggaagaac
cagcaccgtacacagacactacaggggctgctggtggaggcaactgtcgcttcgtggagt
cccccagccaagatcagcgacttcaggcgcagcgacttcggactcctgaagtcagaggtc
acgtacagacacctcagaacagaccgcacggtcaccagtcgcctgacctgccagaaggct
acgaacaaagaacaacggtacagggacaggtctattttttgcacacacagactggagtta
gcacatggcacgaccctaggataccaagagaccttaacagtgtgaattgtgatgaactgg
gacctttgcctccaggttgggaagttagaagtacagtttcaggaagaatatattttgtag
atcataacaacagaaccacgcaattcactgatccacgattacatcacatcatgaaccatc
aatgccaactaaaagagcccagccagcagcctctgccagctccaaatgagggatcgctag
aagatggtgaggagttgcctgcacagagatatgaaagagacttggtacaaaagttgaaag
ttcttagacatgagctttctcttcagcaaccacaggctggtcactgccgcattgaagtat
ccagagaagaaatatttgaggaatcctaccgccagataatgaagatgagaccaaaggact
tgaaaaagaggcttatggtgaaatttcgaggagaggaaggcctggattatggaggagtag
caagagaatggttgtatttactgtgccatgaaatgttgaatccctattacggactcttcc
agtactccacagataatatttacatgctgcaaatcaatccagactcttctatcaatcctg
accacttgtcttatttccattttgttggtcggataatgggtttggctgtgttccatggac
actatattaacgggggtttcacggttcccttttacaaacagctgctggggaagcccattc
agctctctgatctggaatctgttgacccagaattacacaaaagtttagtctggatcttag
agaacgatatcaccccagtcctggaccacacattttgtgtggaacacaatgcttttgggc
ggattttgcagcatgaactcaaaccaaatggcaggaatattccggtgacagaagagaaca
agaaagaatatgtcaggttgtatgtaaactggcggtttatgagaggaatagaggcacagt
tcctggctctgcagaaaggctttaatgaactgattcctcaacatctccttaagcctttcg
atcagaaggaacttgagctgatcataggaggcctggataagatagacctgaatgactgga
agtcaaacacacgtctaaagcactgcatggcagatagcaatatcgtgaagtggttctggc
aagcagtggaaacatttgatgaagaaagaagggcgaggctgttgcagtttgtgacgggtt
caacgcgtgtcccgcttcaaggtttcaaggctttacaaggcgctgcaggacccagactgt
ttaccatccacttaatagatgcaaacacagacaaccttccgaaagcccacacttgcttta
accggattgacattccgccttacgagtcgtacgagaagctttatgagaagctgttgacag
ctgtggaagagacatgtgggtttgctgtggagtga
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