Apaloderma vittatum (bar-tailed trogon): 104278121
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Entry
104278121 CDS
T08559
Symbol
ZC3H13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104278121 (ZC3H13)
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
104278121 (ZC3H13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_4
zf-CCCH_PAN3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
104278121
NCBI-ProteinID:
XP_009873302
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFV
HGPSPRGKGYSSSYRRSPERPTGDLRERMKNKRQEIDTEPQKRSTEESSSPVRKESSRGR
HREKEDIKITKERTPESEEENGDWETNREDSDNGDVNYDYDHELSLEMKRQKIQRELMKL
EQENMEKREEIVIKKEISPEVVRSKLSPSPRKSSKSPKRRSSPKSSSSASKKEKKASTVS
SPLLDQHRSSKSNQSKKKGPRTPSPPPPVQEETPLGKKHKEKHKAKERSEEKAREVKERG
RDFERHKEKKEKQRDPSESSHRQKRSPSPADHSGSNSSPSREYSPPAARRRQTSRVPAKS
TTHKHSFSPSRRSASPSGQHHSPISSRHHSSSSQSGSSVQRHSPSPHRKRTPSPSYQRTA
SPHARRSSSPYPPHSSSSPQRKRSPSRHRSPGREKGRHDRDRTSQSHDRRHERRDETRGK
REKERETRDDRDYDQEQSTSRDHRDDRESRDGRDRRETRDTRDRRELRESRDTRDSRDTR
DYSRDTKDSRDQRDSRSARDSHDYRDRESRDTHKKDDQYQEDSRSYGRSHGREESSRAET
RNDSRSDSRNESRSDRTGRSRGRGPELSDKGSRGTRGSQVDGHSSSGNYHESWESRSSYA
DRDRYDSREQARDSSFERRHSERDRRDNRERDQRASSPVRHQGRSDDLERDERREERRVD
RSDDRRDERARERERERERDRERERERDREREREKERELERDRARERERERERDKDRDRE
RDRDRDHDREREREREREKEREREREERERERERERDRERERERERGRDRDKERDRQRDW
DDKEKGREDRRDKREDIREERSSRDVHEERKSKKRHRNESSPSPRQSPKRRREHSPDSDA
YNSGDDKNEKHRLLSQVVRPQESRSLSPSHVAEERQSRWKEEERKSDRKESSRRYEEPEF
KERISSADKQREPPDASEGSRSRVQENLGHRPSEERDASDRMHDDSKKKSKVQKKATKKK
KDDDSGMERYTNESTTEESQVFSPKKGQKKKNVEKKRKRSKGDSEVSDEEIVLHHKKKKG
PRTPPVTKEELIEAPPEKTVAEVPPKREDTTFSDWSDEDVPERGDIVVPERSTEDSHRKS
HRTRGEKVEAPHVTIEDGPHRKPVDQKRSSSLGSNRSHASSRLRSPSNESAHRSGDDQTG
RKRILHSSSRDRDRDRDREKKSLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRS
SPESDRQVHSRSGSFDSRERLQDRDRHEHDRERERERERREGRQRDWDRDVDKDWPRSRE
RERLREREREREKRRELDRERERQLPDTTERERDRTLDISSQKESTKHTDTKLDRDHEKE
FDGICRDSAASEKERTDKDLGPLQGFEDGNEAEKVESLEGGEDEAKIDDVQSMGSGAGEY
EPISDDELDEILAGDAEKREDQQEDEKMPGKNPVDVIDVDWSSLMPKQPKEPREPGAALL
KFTPGAVMLRVGISKRLAGPELFTKIKETCQRVLEKPKDAENLFEHELGALNMAALLRKE
ERAGLLSNLGPCCKALCFRRDSAIRKQLMKNEKGATKQTYTNSAAMDSDLLRLSLRLFKR
KTVCQVPGQERTEDSKMPQAAIQQEVCVS
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattagaaggaaagtcacagtggaaaataccaagaccatatccgacagcaca
tcccgaagacccagtgtgtttgaaaggcttggacccagcactggaagtactgcagagaca
cagtgccgtaactggctgaagactggcaactgcctctatgggaacacatgtagattcgta
catggcccttcaccacgaggtaaaggctatagcagcagttatagaaggtcaccggaaaga
cccactggagatcttcgggaaagaatgaagaacaaacgccaagagattgacacagaacca
cagaagcgaagtacagaggaatcgtcctctcctgttaggaaagagtcttcacgaggaaga
catagagaaaaggaggatatcaaaattacaaaggagagaacaccagaaagcgaagaggaa
aatggggattgggaaacaaacagagaagactctgataatggagatgttaattatgattat
gaccatgagctgtctttggaaatgaagcgccaaaagattcagagagaactcatgaagttg
gaacaggaaaacatggagaaacgtgaggaaatagtcattaaaaaagagatttctccagag
gtggttagatctaaattatcgccatcaccaaggaagtctagcaaatctccaaaacgaaga
tctagtcccaaatcatcatcttcggctagtaagaaagagaaaaaagcatctactgtatct
tccccactgttggatcagcacaggagttctaaaagtaaccagagtaaaaagaaaggtcct
cgtacccctagtcctccccctccagtacaagaggaaactcccctggggaaaaaacacaaa
gaaaaacataaagcaaaagaacgttcagaagaaaaggcaagggaggtgaaagagagaggg
cgtgactttgaaaggcacaaggagaaaaaagagaagcagagggatccctctgaaagctcc
catcggcagaagcgttctcctagtcctgcagatcattctggcagtaattcttccccttcc
agggagtattcaccacccgctgcaaggcgaagacaaacctcccgagttccagccaagtca
accactcacaaacatagcttctcaccctctcgcaggtctgcttccccctctggtcagcat
cattctcccatatcctccagacatcactcctcttcatcacagtctggctcctctgttcaa
agacattctccttccccacaccgcaaaagaactccttctccgtcctatcaaaggacagct
tccccacatgcaaggcgatcatcttctccctatcccccacactcttcctcttctcctcag
aggaagcgaagcccttcgagacaccgatctcctggaagagaaaagggaagacacgatcgt
gatcggacctcacagtcacatgacaggcgccatgaaaggcgggatgaaactagagggaaa
agggaaaaagaacgagaaacaagagatgatcgtgattatgaccaggagcagagtacctcc
cgggatcatagagatgacagagagtctcgcgatggaagagatcggagggagacaagagac
accagagatcgaagggagctaagggaatccagagacactcgagactccagagatacgagg
gattatagcagggataccaaagacagtcgtgatcagagagactcacgctccgcacgagat
tcccatgactacagagacagagagagtcgcgatacccataagaaggatgaccagtatcag
gaggactcacgcagctatggaagatcccatggcagagaggagagctctcgtgctgaaaca
aggaatgactccagaagtgactccagaaatgagagcagaagtgatagaactggcagaagt
cgaggcagaggtccagaattatctgacaagggaagtcgagggactagaggatcccaggtt
gatggtcacagcagtagtggaaactaccatgagagctgggaatcgaggagtagctatgcg
gatcgggatcgctatgacagtcgagaacaagcgagggattcctcctttgaaagaagacac
agtgaacgtgacaggcgtgacaacagagaacgagatcagagagcaagttcaccggtacga
catcaaggacgaagtgatgacctcgagcgagatgaaagaagagaagagcgaagggtggat
cggtctgatgacaggagagatgaaagggcccgggagagagaaagggagagggagagggac
cgagagagagaaagagaaagagaccgggaaagagaaagggagaaggaaagagagttggag
cgagatcgtgctcgggagagggagcgcgagagagaacgggacaaggacagggatcgtgag
cgggaccgagacagggaccatgacagggaaagggaacgggagagggagagggaaaaggaa
cgagaacgagagcgggaggaacgagaaagggagagagagcgggaaagagatcgggaacgg
gaacgagaaagggagagagggcgagacagagataaagaaagagaccgccagagagactgg
gacgacaaagagaaaggaagggaagaccgcagggataagagagaagatattcgagaagaa
agaagctcaagagatgtccatgaggaaagaaaatccaagaagcgtcacagaaatgaaagc
agtccaagtcctcgtcagtcacccaagcgtcgccgtgaacactctcctgatagtgatgct
tacaacagtggagatgataaaaatgaaaagcacagacttctgagccaggttgtgcggcca
caggaatcacggtcactgagcccttctcatgttgcagaagagcggcagagtcgctggaaa
gaagaggagcggaaatcagacaggaaggaaagttcccggcgttatgaagaaccagagttt
aaagagaggatttcttcagcagataagcaaagagagccaccagatgcttcagaaggctcc
cggtccagggttcaggaaaatcttggacaccgtccctctgaagaaagagatgcttctgat
agaatgcatgatgacagcaagaagaagtctaaggtacagaaaaaggccacaaagaagaag
aaagatgatgacagtggtatggaaaggtacactaatgaatcaacgactgaggaaagccag
gtcttttcacccaagaaaggtcaaaaaaagaaaaatgtggaaaaaaagcggaagagatcc
aagggtgattctgaagtttctgatgaagagattgttctgcatcataaaaagaagaaaggc
ccaagaaccccccctgtaacaaaagaagagttgattgaagcaccacctgagaagactgtg
gcagaagtccccccaaaaagagaagatacaacatttagtgactggtcagatgaagatgtt
cctgaacgcggcgacatcgttgttccagaaagaagcactgaggattcccataggaaaagt
cacaggacgaggggagaaaaggtggaagcccctcatgttactatcgaggacgggccacac
cgtaaacccgtggatcagaagcgcagcagcagccttgggagcaaccggagccatgcctcg
agcaggcttagatccccttccaacgagtcggctcatcgcagcggagatgaccagactgga
cggaagaggatcctgcacagtagctccagagacagggatagggacagggatagagagaag
aaaagcttagaaatcactggggaacgcaaatccagaattgatcagttgaaacgaggcgaa
cccagccgcagcacgtcttcagatcgtcaagattcaagaagccacagttcaagaagaagt
tctcctgaatcagatcgtcaggtccattccagatctgggtccttcgatagcagggaaagg
cttcaggaccgagatcgacatgaacatgatcgagaacgagaaagagagagagagaggaga
gaggggagacagagagactgggaccgagatgttgacaaagactggccaaggagcagggaa
cgagagagactccgagaacgagagagggagagggagaaaagacgggagctggacagagag
agagagaggcagctgcctgataccacagagagagagagagacagaactctggacatctcc
tctcaaaaagaatcgacaaaacacaccgacacgaaactggacagagatcacgaaaaggaa
tttgatggcatttgtcgggattcagcggcttcagagaaggaaagaacagacaaagattta
ggacctttacaaggttttgaagatggaaatgaggccgagaaggtagagagtttagaagga
ggggaagatgaagcaaagattgatgatgtacagtcaatggggtctggtgccggagaatac
gagccaatcagtgacgatgaactggatgaaattctggcaggtgatgctgaaaagcgggag
gatcaacaggaggatgagaagatgcctggtaaaaatcctgtggatgttatagatgtagat
tggtccagtcttatgccaaagcagccaaaggaaccacgtgagcctggggctgcgctctta
aaattcacaccaggtgctgttatgttgagagttggcatttcaaagaggttggcgggacca
gagctcttcacaaaaattaaagagacttgccagagagtgttggagaaacctaaagatgca
gaaaacctttttgaacatgaactaggggccttgaacatggctgcacttctacgaaaagaa
gagagagcgggtcttctcagtaatctgggcccttgctgtaaagcactgtgcttccgaagg
gattctgcaattcgtaagcagctcatgaagaatgaaaagggtgcaacaaaacaaacttac
acaaactctgcagcaatggacagcgacttgttacggttgagtctacggttattcaaaaga
aagactgtgtgccaagttcctgggcaggaaaggacagaggatagtaaaatgcctcaagca
gctatccagcaggaagtgtgtgtgtcttga
DBGET
integrated database retrieval system
