Apaloderma vittatum (bar-tailed trogon): 104278132
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Entry
104278132 CDS
T08559
Symbol
IKBKAP
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avit03016
]
104278132 (IKBKAP)
Transfer RNA biogenesis [BR:
avit03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
104278132 (IKBKAP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
MlrA_C
Beta-prop_WDR19_1st
Cyclin_C
Motif
Other DBs
NCBI-GeneID:
104278132
NCBI-ProteinID:
XP_009873320
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
DFILVLQVECVGSVDSGLTTMSWSPDQELVLLVTGQQTLIMMTRDFEPITEKQIHQDEFG
EGKFVALGWGRKETQFHGSEGKQAAQRKQTEVSPTSAWDDGRPRVTWRGDGQVVAVSAVC
PETGARKVRVWNRELVLQSTSEPISGLEQALSWKPSGNLIASTQEKPNRHDVVFLEKNGL
LHGEFTLPFKKGQVKVNELLWNADSTVLAIWLEDLKVENSNPNSYVQLWTTGNYHWYLKQ
SLHFGSLEENQLVSLLWDRENPYRLHILCQGWHYLSYDWHWTTDRGMGDNSQHVANVAVI
DGDKVLVTAFQHAVVPPPMCTYELQLQKAVNQVTFHTDPKRSGDMAVLDADNKISVYRYG
QSTVNVSTVRFGAVGGNGFKATVETPSLDKTYRVDVCSDSNEVMNPLGLRFLTWLPDDSF
LVVGQGQHADQSVLHHLTAVPHLAGPQEERLTLRLSVPVDGEAISLCCSPVTRTVALQLA
DRRIMKYLWDASTPVLEPWRTSSGSAVQFPYPCVQTSITRISGEEVILGLTDRCRFFVND
TEVASSITSFATYNEFLLVTTNSHTCQCFCLRNITVKALQAGLSTVAAPNSETLRKVERG
SRIVTVVPQDTKVVLQMPRGNLETVHHRALVLAQIRKWLDRLMFREAFQCMRKLRINLNL
LYDHNPRVFLENAETFIRQIDSVNWINLFFTELKEEDFTKSMYPSLNGSSNAQPRWHPDQ
KKVNLICDVLRVAMEHIDPQKYCLSILTAHVKKSPPELEAALQKVHDLRESVAPDVKAVG
AEEALKYLLFLVDVNELYDYSLGTYDFDLVIMVAEKSQKDPKEYLPFLNTLQKMETNYQR
YTIDRHLKRYTKALGHLSKCGPDHFSEFLNLVKDQNQYCEALKLYPSSTQEYKDISDAYG
EYLIQKQLYEQAALIFARADILAKALDAFQNSGSWQQALCMATRLGYTQDQLSSLARSMA
GKLVEQRKHREAAVLLEQYAQDYEEAILLLLEGALWEEALRLIHKYGRLDILETNFKPAI
LEAQKSQLMFLDSQKTAFLRYKSRLQVVRELKEKACESLQDYEMPNGPELDLFSETSSVV
TASDMNSKYSHSNSRISARSSKNRRKAERKRYSLKEGSPFEDLALLEVLGGNVRVVEAVK
GDVHILLKQLVLFGCDEQAGALQQALEDVLQLMETSIPEIWTPDLQQSSVNPVLGPNSTA
NSIMAAYQQKRMMTPVVQDPELLIPPKFNKNLQWKLHLLQ
NT seq
3724 nt
NT seq
+upstream
nt +downstream
nt
tgattttattttggtcttgcaggtggaatgtgttggaagtgtggacagcggtctgactac
catgagctggagtcctgaccaagagcttgttttgcttgtaacaggtcagcaaacactcat
catgatgacaagggattttgaaccaattactgagaagcaaatccatcaggatgagtttgg
ggaaggaaagtttgttgctcttggctggggtagaaaggaaacacagttccatggatcgga
aggaaaacaggcagcacagcgcaaacagacggaggtgtcacctacttcagcctgggatga
cggcaggcctcgggtgacgtggagaggagatgggcaggttgttgcagtgagtgctgtctg
tccagagacaggtgctcggaaggtccgagtatggaacagggaacttgtgctgcagtcaac
aagtgagccgatctcaggattagaacaagcgctgtcctggaagccctctggaaacctaat
agcatctacgcaagaaaaacccaacagacatgatgtggttttcttggagaagaatggact
tctgcatggggagtttactctcccattcaagaaggggcaggtcaaagttaatgagctgct
ttggaatgcagattctacggtcctggctatatggctggaagacctgaaggtggaaaattc
caacccaaacagttacgttcagctgtggaccacaggcaactatcactggtacctgaagca
aagtctacattttggtagcttggaggaaaatcagttggtgtcactgctgtgggaccgaga
gaacccatatagactgcatatactgtgccagggttggcattacctctcgtatgactggca
ttggaccacagaccgtgggatgggagacaatagccagcatgtggcaaacgtggctgtcat
agatggagataaagtgcttgtcacagcatttcagcatgctgtggtgcctccacccatgtg
tacctatgagctccagcttcaaaaggcagttaatcaagttacatttcacacagatcccaa
gcgtagtggagacatggctgtcctggatgctgacaacaagatttctgtgtacagatatgg
acagagcacagtgaatgtctccactgtcaggtttggagctgtgggtggaaatggatttaa
agccactgtggaaacaccatccttggataaaacctacagagttgatgtgtgcagcgacag
caatgaagtgatgaatcctctggggctccgatttctcacctggctgccagatgacagctt
tctggtggttgggcagggccagcatgctgatcagtctgtgcttcaccatctgacggcagt
gcctcacttggctggacctcaagaagagcgcttgaccttacggttgtctgtgcctgtgga
tggagaagcgatcagcctgtgctgcagcccagtgaccagaacggtcgctctacagctggc
tgatagacggatcatgaaatacctatgggacgcttctactccagtccttgagccctggcg
gaccagcagtggctctgctgttcagttcccctacccttgcgtgcagacttctatcaccag
gatcagtggagaagaggtgatcctgggcctcacagatcgatgccgattttttgttaatga
tactgaggttgcttccagcatcacctcgtttgcaacatacaatgagtttttgttggtgac
aactaactcccacacctgccagtgcttctgcctgaggaacataacagtgaaagcccttca
ggctggcttgagcactgttgctgcacccaacagcgagaccctgcgcaaggtggagcgagg
ctcgcgtatcgtcaccgttgtgccccaggacacaaaggttgtgctgcagatgccaagagg
aaatctggagactgttcaccaccgagctttggttcttgcgcagatacggaagtggctgga
caggcttatgttcagagaagcattccagtgtatgaggaagctgcgaatcaacctcaatct
cctctatgaccacaatcccagggtatttctggaaaatgcagaaacctttatcaggcaaat
agattctgtgaactggatcaacttgtttttcacagaactgaaagaagaagatttcacaaa
gagcatgtacccatccctgaacggcagcagtaatgctcagccacgctggcatcctgatca
gaaaaaagtaaacctcatatgtgatgttttgagagttgccatggaacacattgaccctca
aaaatactgcctgtcgatactcacagcacatgtgaagaaaagtcctccagaactggaagc
tgctctccagaaggttcatgatcttagagaaagtgttgctccagatgtgaaagctgtggg
tgcagaagaagcgctgaagtacctgcttttccttgtggatgtcaatgaattgtacgatta
ttccttggggacgtacgactttgatttagtcatcatggtggcagaaaagtctcaaaagga
cccgaaagaatacttgcctttcttaaataccctccagaaaatggaaaccaattatcagcg
atacacaatagacagacacctgaagagatacacaaaagctcttgggcacctcagcaaatg
cggtcctgaccacttctctgaatttctgaatttggtgaaggatcagaatcagtattgtga
agccttgaagctgtatccctctagcactcaggagtacaaggatatcagtgatgcatatgg
ggagtacttgattcagaagcagctctatgaacaggctgcattgatatttgctcgtgctga
catcttggcaaaagcacttgatgcttttcagaacagtggcagctggcagcaagccctgtg
catggcaacacggcttggttacacgcaggatcagctgtccagcctagcaaggagcatggc
aggaaaacttgttgaacagagaaagcacagagaggcagctgtactcctggagcaatacgc
tcaggactatgaagaggccattcttctgctcttagaaggtgctctctgggaagaggcttt
aagactgattcacaagtatggtagactggatatcttggagaccaacttcaaacctgctat
tctggaagctcagaaaagtcagctgatgttcctagattctcagaaaacagcgtttcttcg
ctataagagtcgcctgcaagttgtccgagagctgaaagagaaggcttgtgagagtctgca
ggattatgaaatgccaaatggcccagagttggatcttttctctgaaaccagcagtgttgt
gacagccagcgacatgaacagcaaatattcgcacagcaattcaagaatatcggcgcgatc
ctcaaagaaccggcgcaaggctgagcgcaagagatacagcttgaaggaggggagtccttt
tgaagatctggcccttctggaagtcctgggaggaaatgttcgtgttgttgaggctgtgaa
gggagacgtacacatccttctgaagcagttggtgctgtttggttgtgatgagcaggctgg
ggcactgcagcaagcgctggaagacgttttgcagttgatggagacctcgatcccggaaat
ctggactccagacctacaacagagctctgtaaatccggtcctggggccgaattcaactgc
aaacagcattatggctgcctatcagcagaagaggatgatgactcctgttgtacaagatcc
agaattacttatacccccaaaattcaataaaaacctacagtggaaactgcatcttctcca
gtaa
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