KEGG   Apaloderma vittatum (bar-tailed trogon): 104278207
Entry
104278207         CDS       T08559                                 
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
  KO
K23533  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:avit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:avit04131]
    104278207 (LINGO1)
Membrane trafficking [BR:avit04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    104278207 (LINGO1)
SSDB
Motif
Pfam: LRR_8 LRR_5 LRR_4 I-set Ig_3 ig Ig_2 LRR_9 LRRNT
Other DBs
NCBI-GeneID: 104278207
NCBI-ProteinID: XP_009873413
LinkDB
Position
Unknown
AA seq 682 aa
MESWGVGRRDGLVAKGLDFSWKMRTCALPWQRLSPQRQLYQPFPVVVPILSLPPPCSFSP
PCYLQVRDRMVAGEASMRSPILACWQPILLLMLGSILSGSATGCPPRCECSAQERAVLCH
RKRFMVVPEGIPTETRLLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNL
FNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDND
LVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINTIRDYSFKRL
YRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNP
IATIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSV
GNLETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNY
FTCRRARIRDRKPQQIFVDEGHTVHFVCRADGDPPPTIMWLSPRKHLISTKTNGRLTVFP
DGTLEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNE
SDANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYV
PRKSDAGISSADAPRKFNMKMI
NT seq 2049 nt   +upstreamnt  +downstreamnt
atggaaagttggggggtggggagaagagatggtcttgtagccaaggggctggatttcagc
tggaaaatgagaacttgtgctctgccttggcagcgcctttcgcctcagcggcagctttac
caaccttttcccgtggtcgtgcccatcctttccttacctccaccttgctctttctctcct
ccatgttacctgcaggtgagagataggatggtagctggggaggcgagtatgcgcagccca
atcctggcctgctggcagccgattctcctcctgatgctgggatccatcctgtccggctct
gccacgggctgcccgccgcgctgcgagtgctctgcccaggagcgcgccgtcctgtgccac
cgaaagcgattcatggtcgtgccggaggggatcccgaccgagaccaggctgctggacttg
ggcaagaaccgcatcaagacgctcaaccaggatgaatttgccaactaccctcacctggag
gagctggagctaaatgagaacatcatcagtgccattgaacctggggctttcaacaacctc
ttcaacctcaggacgctggggctcaggagtaacagactcaagctgatccctttgggggtg
tttaccggactcagcaaccttaccaagctagacattagcgagaacaaaattgtgatcctc
ctagactatatgttccaggacttgtacaacctgaagtctttggaggtgggggacaacgac
ctggtctatatctcccaccgggccttcagcggcctcaacagcctggagcagctgaccctg
gagaaatgcaacctgacctccatccccacggaggccctgtctcaccttcatggcttgatc
gtgctgcggctgcgccatctgaacatcaacaccatccgggattactcattcaagaggctg
taccggctcaaggtcctcgagatctcgcactggccctacctggatactatgacgtccaac
tgcctctacgggttgaacttgacctccttgtccatcacccattgcaacctgacatccatc
ccgtacgtgtcggtgaggcacctggtttacctccggttcctgaacctgtcctacaacccc
attgccaccatcgagggctccatgctccacgacctgctcaggcttcaggagatccagctg
gtgggagggcagctgacgacggttgagcccttcgccttccgcggcctcaattaccttcgc
atcctgaacgtgtcagggaatctgctgaccaccctggaggagtcggccttccactcagtg
ggcaacctggagacgctcatccttgacaacaaccccttagcctgcgactgtcggctgctc
tgggttttccggcggcgatggaggttgaacttcaacaagcagcagcccacctgctccacc
cctgagttcgtccagggcaaggagttcaaagacttccccgacgtcctcctgcccaactac
ttcacctgccgccgagcacggatacgggaccgcaaacctcagcagatctttgtggacgaa
ggccacacggtccactttgtctgccgggcagatggggacccgccccccaccatcatgtgg
ctctccccgcggaagcacctcatctctaccaaaactaacgggcggctcactgtcttcccc
gacggcacgctggaggtgcgctacgcccagatccaggacaacggcacctacctatgcatc
gccagcaacgcgggtggcaatgacaccatgctggcccacctgcacgtgcgcagctactcc
ccagactggccccaccagcccaacaagaccttcgcgttcatctccaaccagcccaacgag
agcgatgccaacagcacgcgcgccaccgtgcctttcccctttgacatcaagactctcatc
atcgccaccaccatgggcttcatctccttcctgggcgtcgtgctcttctgtctggtgctc
ctcttcctgtggagccgggggaaaggtaacaccaagcacaacattgaaatcgagtacgtg
ccacgcaagtccgatgccggcatcagctctgccgacgcgccgcgcaagttcaacatgaaa
atgatttaa

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