Apaloderma vittatum (bar-tailed trogon): 104278207
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Entry
104278207 CDS
T08559
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
avit04131
]
104278207 (LINGO1)
Membrane trafficking [BR:
avit04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
104278207 (LINGO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
Ig_VEGFR-1-like_5th
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
104278207
NCBI-ProteinID:
XP_009873413
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MESWGVGRRDGLVAKGLDFSWKMRTCALPWQRLSPQRQLYQPFPVVVPILSLPPPCSFSP
PCYLQVRDRMVAGEASMRSPILACWQPILLLMLGSILSGSATGCPPRCECSAQERAVLCH
RKRFMVVPEGIPTETRLLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNL
FNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDND
LVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINTIRDYSFKRL
YRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNP
IATIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSV
GNLETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNY
FTCRRARIRDRKPQQIFVDEGHTVHFVCRADGDPPPTIMWLSPRKHLISTKTNGRLTVFP
DGTLEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNE
SDANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYV
PRKSDAGISSADAPRKFNMKMI
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttggggggtggggagaagagatggtcttgtagccaaggggctggatttcagc
tggaaaatgagaacttgtgctctgccttggcagcgcctttcgcctcagcggcagctttac
caaccttttcccgtggtcgtgcccatcctttccttacctccaccttgctctttctctcct
ccatgttacctgcaggtgagagataggatggtagctggggaggcgagtatgcgcagccca
atcctggcctgctggcagccgattctcctcctgatgctgggatccatcctgtccggctct
gccacgggctgcccgccgcgctgcgagtgctctgcccaggagcgcgccgtcctgtgccac
cgaaagcgattcatggtcgtgccggaggggatcccgaccgagaccaggctgctggacttg
ggcaagaaccgcatcaagacgctcaaccaggatgaatttgccaactaccctcacctggag
gagctggagctaaatgagaacatcatcagtgccattgaacctggggctttcaacaacctc
ttcaacctcaggacgctggggctcaggagtaacagactcaagctgatccctttgggggtg
tttaccggactcagcaaccttaccaagctagacattagcgagaacaaaattgtgatcctc
ctagactatatgttccaggacttgtacaacctgaagtctttggaggtgggggacaacgac
ctggtctatatctcccaccgggccttcagcggcctcaacagcctggagcagctgaccctg
gagaaatgcaacctgacctccatccccacggaggccctgtctcaccttcatggcttgatc
gtgctgcggctgcgccatctgaacatcaacaccatccgggattactcattcaagaggctg
taccggctcaaggtcctcgagatctcgcactggccctacctggatactatgacgtccaac
tgcctctacgggttgaacttgacctccttgtccatcacccattgcaacctgacatccatc
ccgtacgtgtcggtgaggcacctggtttacctccggttcctgaacctgtcctacaacccc
attgccaccatcgagggctccatgctccacgacctgctcaggcttcaggagatccagctg
gtgggagggcagctgacgacggttgagcccttcgccttccgcggcctcaattaccttcgc
atcctgaacgtgtcagggaatctgctgaccaccctggaggagtcggccttccactcagtg
ggcaacctggagacgctcatccttgacaacaaccccttagcctgcgactgtcggctgctc
tgggttttccggcggcgatggaggttgaacttcaacaagcagcagcccacctgctccacc
cctgagttcgtccagggcaaggagttcaaagacttccccgacgtcctcctgcccaactac
ttcacctgccgccgagcacggatacgggaccgcaaacctcagcagatctttgtggacgaa
ggccacacggtccactttgtctgccgggcagatggggacccgccccccaccatcatgtgg
ctctccccgcggaagcacctcatctctaccaaaactaacgggcggctcactgtcttcccc
gacggcacgctggaggtgcgctacgcccagatccaggacaacggcacctacctatgcatc
gccagcaacgcgggtggcaatgacaccatgctggcccacctgcacgtgcgcagctactcc
ccagactggccccaccagcccaacaagaccttcgcgttcatctccaaccagcccaacgag
agcgatgccaacagcacgcgcgccaccgtgcctttcccctttgacatcaagactctcatc
atcgccaccaccatgggcttcatctccttcctgggcgtcgtgctcttctgtctggtgctc
ctcttcctgtggagccgggggaaaggtaacaccaagcacaacattgaaatcgagtacgtg
ccacgcaagtccgatgccggcatcagctctgccgacgcgccgcgcaagttcaacatgaaa
atgatttaa
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