KEGG   Apaloderma vittatum (bar-tailed trogon): 104278377
Entry
104278377         CDS       T08559                                 
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:avit00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104278377 (EXOSC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:avit03019]
    104278377 (EXOSC1)
Messenger RNA biogenesis [BR:avit03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     104278377 (EXOSC1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     104278377 (EXOSC1)
SSDB
Motif
Pfam: EXOSC1
Other DBs
NCBI-GeneID: 104278377
NCBI-ProteinID: XP_009873629
LinkDB
Position
Unknown
AA seq 124 aa
SVQVCSINSRFAKVHILYVGSTPLKSTFRGTIRREDIRATEKDKVEVYKSFRPGDIVLAK
VISLGDAQSNYLLSTAENELGVVVARSEAGVQMVPISWREMQCPRTHTKEFRKVARVQPQ
FLQT
NT seq 375 nt   +upstreamnt  +downstreamnt
tctgtgcaggtttgcagcattaactctcgctttgccaaggtgcacatcctgtatgtcggc
tccacgccgctgaaatccaccttccggggaaccatacgaagagaagatattcgagccacg
gagaaagataaggtagaagtgtacaagagtttccgccctggtgacatagtcctggccaaa
gttatctccctgggtgatgcgcagtccaactacctgctgagcacggcagagaacgagctg
ggagtggtggtggcacgcagcgaggcaggggtacagatggtgcccatcagctggcgtgag
atgcagtgcccgcggacacacaccaaagaattccgtaaggtggcccgcgtgcagccccag
ttcctgcagacctag

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