Apaloderma vittatum (bar-tailed trogon): 104278407
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Entry
104278407 CDS
T08559
Symbol
PTCHD2
Name
(RefSeq) LOW QUALITY PROTEIN: patched domain-containing protein 2
KO
K24683
protein dispatched 3
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
avit04990
]
104278407 (PTCHD2)
Domain-containing proteins not elsewhere classified [BR:
avit04990
]
Other domain-containing proteins
Patched domain-containing proteins
104278407 (PTCHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7023
Sterol-sensing
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
104278407
NCBI-ProteinID:
XP_009873669
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
MDTEDDPLLQDAWLDEEDEEVAFSSRKKREGALLCGKSPCRARPLRATLLVSDFWNIVGW
VFTNPYCAGFILFLGCAIPATLALVMFLRYPALDIDISYNAFEIRNHESSQRFDALALAL
KSQFGSWGRNRRDVADFTSETLQRLIFEQLQQLHLNASHLRVSTRVKRDAPEGRTNSPEP
RAHLYAGNRTSRTGRGAPRWDYSSTYISANTQTHAHWRIELIFLARGDSENNIFTTERLV
TIHEVERKIVDHPRFREFCWKPHEVLKDLPLGSYSYCSPPSSLMTYFFPTERGGKIYYDG
MGQDLADIQGSLELAMTHPEFYWYVDESLSAENMKSSLLRSEILFGAPLPNYYSVDDRWE
EQRHKFQNFVITYVAMLAKQSTSKVQVLYGGTDLFDYEVRTTFNNDMLLAFISSSCIAVL
VYILTSCSVFLSFFGIASIGLSCLVALFLYHVVFGIQYLGILNGVAAFVIVGIGVDDVFV
FINTYRQATHLKDLRLRMIHTVQTAGKATFFTSLTTAAAYAANIFSQIPAVHDFGLFMSL
IVSCCWVAVLFTMPAALGIWTLYVSPLESSCQTSCGQKCTKKHALHLAEDLFVASEATSG
AGRETLPYLDDDIPLLSVEEEPVSLEMGDVPLLCVMPENLQLPAEKSNRGHLITRLQELL
EHWVLWSAVKSRWVIVGLFLLVLLLSVFFASRLHPASRAPLLFRPDTNIQVLLDLKYNLS
AEGISCITCSGLFQEKPHSLQNNIRTSLEKKKRGSGSPWGSKGSISDTGQQDLQGTVYIS
TSRSKGRPAIYRFSLNASVPAPWQMVSPGAGEVPSFQVYRVPFGNFTKKLTACVSTVGLL
KQTSPRKWMMTTLSCDTKRGWKFDFSFYVAAKEQQRTRRLYFAQSHKPPYHGRVCVAPPG
CLLSSSPDGPTKGILYVPSEKAAPKAKLSATSGFNPCVNTGCGKPAVRPLVDTGAMVFVV
FGIRGVNRTRRPDNHVIGDLGSVIYDDSFDLFKEIGNLCRLCKAIASNAELVKPGGAQCL
SSGYSISSFLQMLHPECKNIPEPNLLPGQLSHGAVGVKDGKVQWISMAFESTTYKGKSSF
QTYADYLKWETFLQQQLQLFPEGSALRHGFQTCEHWKQIFMEIIGVQSALYSLVLSLVIC
VAAVAVFTTHILLLLPVLLSILGVVCLVVTIMYWSGWEMGAVEAISLSILVGSSVDYCVH
LVEGYLLAGENLPLHQAPDPTACRQWRTIEAVRHVGVAIVSSAVTTMIATVPLFFCIIAP
FAKFGKIVALNTGGSILYTXXXXXXXSLSGPGTFTRSGTSCLKAVLGVLLAGLLALCVGL
ALLKSGFQIPLPNGTAL
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggacacagaggatgaccccttgttacaggacgcctggctagacgaggaagatgaagag
gtagccttcagctcccggaagaagcgagagggtgctctgttgtgtgggaaaagcccgtgc
agagccaggcccctgcgtgccacgctgctggtgtccgacttctggaatattgttggttgg
gtgtttaccaacccgtactgcgctggcttcatccttttcctgggctgtgccatccctgca
acgcttgctcttgtcatgttccttcgctacccagccctggatatcgacatctcctacaac
gctttcgagatccgcaaccacgagtcctctcagcgtttcgatgcacttgccttggccctc
aagtcccagtttgggtcatgggggaggaaccgccgggacgtggctgacttcacctctgaa
acgctgcagaggctcatctttgagcagctccagcagcttcacctcaatgcttcccacctc
agggtcagcacgcgggtcaagcgcgacgccccagagggcaggacaaactcacccgagccc
cgcgcccacctgtacgcgggaaaccggacttcccggactgggagaggtgccccacgctgg
gactactccagcacctacatcagcgccaacacgcagacacacgcccactggcgcatcgag
ctcatctttctggctcggggcgactctgagaacaacatcttcaccaccgagcgcctagtt
accatccatgaggtagagcgcaagatcgtggaccaccctcgcttccgggagttctgctgg
aagcctcacgaagtcttgaaggacctgcccctgggatcttattcctactgctccccgccc
agctccctcatgacctatttcttccccactgagagaggagggaagatttactatgatggc
atgggacaagaccttgctgacatccaaggctcgctggaactggccatgacccaccctgaa
ttctactggtacgtggatgagagcttgtctgccgagaacatgaagagctccctgctgcgg
agcgaaatcctctttggggcaccgctgccgaactactactcggtggacgaccgctgggag
gagcagcgccacaagttccagaactttgtcatcacctacgtggccatgctggccaagcaa
tccacaagcaaagtccaggtgctgtatggagggacagatttatttgactatgaagtgagg
acgactttcaataatgacatgttgctggccttcatcagcagtagctgcatagctgtcttg
gtctacatccttacctcctgctcagtgttcctgtcattctttggcattgccagcattggg
ctaagctgcctggtggctctgttcctgtaccacgttgtatttgggatccagtacctgggt
atcctcaatggtgtggctgcctttgtcattgtggggatcggggttgatgatgtctttgtc
ttcatcaacacctaccgccaagccacccacctcaaggacctgcggctgcgcatgatccac
actgtgcagacggcagggaaggccaccttcttcacctccctcaccacagctgcagcatat
gctgccaacatcttctcccagatcccagccgtgcatgactttggactcttcatgtcactg
atcgtgtcctgctgctgggtagctgtgctcttcaccatgccagctgctcttggaatatgg
accctttatgtgtccccgctagagagctcctgccaaaccagctgtggtcagaagtgcacc
aaaaagcacgccttgcacctggctgaagatctcttcgttgcctcagaggccacctctgga
gcaggcagagagacgcttccctatcttgatgatgacatcccactgctcagtgtggaggag
gagcctgtctccctggaaatgggggatgtccccttgctttgtgtgatgcccgaaaatctg
cagctccctgcggagaagagcaaccgaggtcacttgataactcgtctgcaggagctgctg
gagcactgggtgctgtggtcggcagtgaagagcagatgggtgatcgtagggctctttctt
cttgttttgctcctgtccgtattctttgctagccgcctccatccagctagccgcgctccg
ctcttgttccggccggacactaacatccaggtgctgctggacctgaaatacaacctgagt
gctgaaggcatctcctgcattacctgctcaggtttgtttcaggaaaagccccatagttta
cagaacaacatcagaacctccttggaaaaaaagaagaggggctcagggtcgccttgggga
agcaaagggagcataagtgatacagggcagcaagatctccaggggactgtgtatatctcc
acgtccagaagtaagggaaggccagccatctacagattctcgctcaatgccagtgtccct
gccccctggcagatggtgtcaccaggagccggagaggtgccttcattccaggtgtataga
gtgcctttcggtaacttcaccaagaagctgacagcttgtgtgtccacagtagggctgctt
aagcagacgagccccaggaagtggatgatgaccaccttgtcctgtgacaccaagagaggc
tggaagttcgacttcagtttctacgtggccgccaaggagcagcagcgaacacggagactg
tattttgcccagtcgcacaagcctccgtaccacggccgagtgtgtgtagcacctcctggc
tgcctcctcagctctagcccagatggacccaccaaaggcatcctttatgttcccagtgag
aaggcggcacccaaagcaaagctgtcggccacttctggatttaatccgtgcgtgaacaca
ggctgtgggaagccggcggtgcggccgctggtggacacgggagccatggtgtttgtcgtg
tttggtatcaggggcgttaatcgcacgagacgcccggacaaccacgtcatcggagacctg
ggcagcgttatctatgatgacagcttcgacctcttcaaagagattggcaacctgtgccgc
ctctgcaaagccatcgccagcaacgccgagctcgtgaagccgggaggggctcagtgcctg
tcctcgggttacagcatctcctcctttctgcagatgttgcaccctgagtgcaagaacatc
cctgagccgaacctgctgcccgggcagctctctcacggggcggtgggggtgaaggatggg
aaggtgcagtggatctccatggcctttgaatcgacaacctacaaagggaaatcttccttc
cagacatatgctgactacctgaagtgggagacgttcctgcagcagcaactccagctcttc
ccagagggctctgctctccggcatggtttccagacctgcgagcactggaagcagatcttc
atggagattataggagtgcagagtgccctgtacagtctcgtcctctcgctggttatttgt
gtggctgcggtggctgtgttcaccactcacatcctcctcctgctgccggtgctgctcagc
attttaggggtggtctgcttggtggtgaccatcatgtactggtccggctgggagatggga
gctgtggaagccatttccctctccatcctcgtcggctcctccgttgattactgcgtgcac
ttggtggagggctacctgctggcaggggagaatctgccactgcaccaggctccggacccc
accgcctgccgccagtggaggacgatcgaagcggtccgccacgtgggtgtggcaatcgtc
tcgagcgccgtcaccaccatgattgccaccgtcccgctcttcttctgcatcatcgcccct
ttcgctaagttcgggaagattgtggccctcaacacgggaggctccatcctgtacacgncn
nnnnnnnnnnnnnnnntgagtcttagtgggcccggcaccttcacccgcagcgggacgtcc
tgcctcaaggctgtgctgggggtgcttctcgctggcctgctggctctgtgcgtcggcctc
gccctgctgaagagtggatttcagatccctctccctaacgggacagccctgtag
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