Apaloderma vittatum (bar-tailed trogon): 104278440
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Entry
104278440 CDS
T08559
Symbol
TAF4
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104278440 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avit03021
]
104278440 (TAF4)
03036 Chromosome and associated proteins [BR:
avit03036
]
104278440 (TAF4)
Transcription machinery [BR:
avit03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104278440 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
104278440 (TAF4)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104278440 (TAF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
104278440
NCBI-ProteinID:
XP_009873720
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MATALSTRNGKIGTTTVQTLNGSNVVMNSHHTGSAAFSGTPVTANPASAPAVAPLVNNGP
GSVAKGNTVNAVLPAASNTVIQTSFLNTAVSAASSSSPTVISSQPPPSIGTGAPTVTLVR
PXXXXXXXXXXTGPPGAAAGAATQNGSNTVINSTISVGSFPAVATATVGSGVSLQTSLVN
SQSGSAVPAAPATQVIKSESPKTIVQAVSQQQTLATGGQPSTTGGNMIIGQTMQAGLSNV
APNPGGIPPAAPGTPTGMAKGTANTVAQSLPRTPTATTSGIRATLTPTVLAPRLPQPPQN
PTNIQNFQLPPGMVLVRSENGQLLVIPQQALAQMQAQAHAQSQPQNTMTPRPATPTNAPP
VQISTVQAPGTPIIARQVTPTTIIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTT
LGTATAVQTGTPQRTVQGTTATSTIATETMENVKKCKNFLSTLIKLASSGKQSTETAANV
KELVQNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQ
QQPTTQATIATIPSAAVLISSSVQRTAGKATATVTSTLQQPVISLTQPAQVGVSKQGQSA
PLVIQQPQKAGTLIRPPQVTLTQTPMVALRQPHSRIMLTTPQIQLNQLQPVPVVKPAVLP
GNKAIATVSTQVAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELV
GTLTRSCKDETFLFPAPLQRRILEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKLSET
AQQRNISYKDDERYEQTSDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPE
QLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDSLGSGSGTEGSGSSAAVPG
SSGVGTTSQFKRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgccttgtccaccaggaacggcaagattgggaccacaacggtgcaaactttg
aatgggagtaacgtggtgatgaactctcaccacacaggaagtgctgctttctctgggact
cctgtgactgcgaaccccgcttcagcacctgccgtggccccgctcgttaacaatggacct
ggatctgtggcgaaaggaaatactgtaaatgcggttttgccagcggcttccaacactgtc
atccagacttctttccttaatactgctgtgtcggctgcatcttcttcctcgcccacagtt
atctcctcgcagccaccgccaagcattggcactggcgcgcccacagtaacgctggtgagg
ccannnnnnnnnnnnnnnnnnnnnnnnnnnnnnacgggaccccccggagctgcagctggt
gcagccactcagaacgggagcaatactgtgatcaattcaaccatcagtgtggggagtttt
cctgctgttgctacagccactgtgggatctggagtttccctccagacatcgctcgtgaac
agccagtctggttccgccgtgccggcagctcccgccacgcaggttatcaaatccgagtct
cctaaaactatagtccaggcagtatcccaacagcagacgctggctactggtggccagccc
agtactacagggggtaacatgattattgggcaaactatgcaagctgggctctccaatgtt
gctcccaatcctggtgggatacctcctgcagcccccggcacccccacaggaatggctaaa
ggcactgccaacacggtggcgcaaagtctgccgaggactccaacggcaactacgagtgga
atcagagcaactttgactcctacagttttagcacctcgtttgcctcagccacctcagaat
ccaactaacattcagaattttcagttgccgccaggcatggtccttgtgcgcagtgagaat
gggcagttgctggtgatcccccagcaggccttggcgcagatgcaagcacaggcacatgcc
cagtctcagcctcagaataccatgactcctcgtcctgctacacctactaatgctcctcca
gtgcagatatcgaccgtgcaggctccaggaacgcctattattgcacgacaggtgacacca
actactattatcaagcaagtgtctcaggctcaaacaacagtgcaacccacaacaacgcta
cagcgtcctcctgttgtgcaacctcagattgttctgggtggtactgcacagacaactacg
ttggggacagcaacagctgtacaaactggaactcctcagaggacagtacaaggaacgacg
gcaacctccacgattgctacagaaactatggaaaatgtgaagaaatgcaaaaactttctg
tccacattaataaaactggcatcatctggaaaacagtctacagagactgcagctaacgtg
aaagagttggtacagaacctgctggatgggaaaattgaagcagaagactttaccagcagg
ctgtacagagaacttaattcttcacctcaaccttaccttgtgcctttcctgaagaggagt
ttacctgccttgagacagttaacaccggactctgcagcgtttattcagcaaagtcaacag
cagcagccaacaacgcaagcaacgatagcgacgattccgtctgcggccgtgcttataagc
tcctccgttcagcgcacagcagggaaggcgactgcgactgtaacaagtactctccaacaa
cctgtcatcagcctaactcaacctgcacaggttggtgttagtaaacaaggacagtctgca
ccactggttatccaacagcctcaaaaagcagggacattgataaggcccccacaggtaaca
ttgacacagacaccgatggtagcgttgcggcaaccacacagtcgtatcatgctcactact
cctcaaattcaactgaaccagcttcagccagtaccggtggtaaaacccgcagtattacct
ggaaacaaagctattgccactgtttcgacacaagtagctgctgctcagaagaataaactg
aaggaacctgggggaggctcttttagggatgatgatgacattaatgatgttgcatcaatg
gctggagtcaacctgtcagaggaaagtgctcgaatattggcgacaaattctgagctagtg
ggcacattaacaaggtcctgtaaagacgaaaccttccttttcccggcacctttacaaaga
aggatattagaaataggtaaaaaacacggaataacagaaatacatcctgatgtagttagc
tacgtatcacatgctacacaacaaaggctacaaaacctcgtggaaaaattatcggagact
gctcaacaaaggaatatttcttacaaggatgatgaaagatacgaacaaacaagtgacgtt
cgggcacagctcaagttctttgaacaacttgatcaaatagaaaagcaacgtaaagatgaa
caagaaagggaaattttaatgcgtgcagcaaagtctcgatctcgacaagaagatccagag
cagcttaggttgaaacagaaagccaaggagatgcagcaacaagagctagcgcagatgaga
cagagggatgccaacctgactgcgttagctgcgatcggtcccagaaagaaaaggaaacta
gattcactgggatctggatcagggacagagggatctggttcgagcgcagcagtcccaggc
agctctggagttggaacgaccagtcagttcaagcgacaaaggataacgcgggtgaacctc
agggacctcatattttgtttagaaaatgagcgagagacaagccattcactattgctatat
aaagcattccttaagtaa
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integrated database retrieval system
