Apaloderma vittatum (bar-tailed trogon): 104278479
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Entry
104278479 CDS
T08559
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04010
MAPK signaling pathway
avit04210
Apoptosis
avit04218
Cellular senescence
avit04519
Cadherin signaling
avit04620
Toll-like receptor signaling pathway
avit04621
NOD-like receptor signaling pathway
avit04622
RIG-I-like receptor signaling pathway
avit04623
Cytosolic DNA-sensing pathway
avit04625
C-type lectin receptor signaling pathway
avit04920
Adipocytokine signaling pathway
avit05132
Salmonella infection
avit05164
Influenza A
avit05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104278479 (NFKB1)
09133 Signaling molecules and interaction
04519 Cadherin signaling
104278479 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104278479 (NFKB1)
04218 Cellular senescence
104278479 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104278479 (NFKB1)
04621 NOD-like receptor signaling pathway
104278479 (NFKB1)
04622 RIG-I-like receptor signaling pathway
104278479 (NFKB1)
04623 Cytosolic DNA-sensing pathway
104278479 (NFKB1)
04625 C-type lectin receptor signaling pathway
104278479 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
104278479 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104278479 (NFKB1)
05168 Herpes simplex virus 1 infection
104278479 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
104278479 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avit03000
]
104278479 (NFKB1)
Transcription factors [BR:
avit03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
104278479 (NFKB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
104278479
NCBI-ProteinID:
XP_009873772
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MAGEDSYIMGVSDPQMFAMDQLMGMNALFNNTNYITSDLPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLEMRMIDACKKGYNPGLLVHPEL
GYLQAEGCGDRQLTEREREIIRQAAVQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGSGAGGGGMYGAGGGGAGSGFSYPSYGYSTFGGMHFHPGT
TKSNAGMKHGLSNSTAGQDGKSSDVQSDKWDVKHDVKAETMERSECRTSGDNEEEKDAVL
SCKTEVNEADCRWPDGLFLEKAMQLAKRHCNALFDYAITGDVKMLLAVQRHLTVVQDDNG
DNVLHLAIIHLHTELVKNLLQVMPDLNYNDIINMRNDLYQTPLHLAVITKQAEVVEDLLM
AGADVSLLDRHGNSVLHLAATEGDDKILSLLLKHKKISPMVDLSNGEGLSAIHMVVMANS
MSCLKQLIASGVNVNAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTTPL
HIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLEDVKDDNDDDDEGIVPGTTPLDMAATC
EVYDILNGKPYKSAVVSEDFLAQGHLRELNESSKMQLYKLLELPSPNKNWFTLAQKLGLG
ILNNAFRLSPSPSKTLLDNYEVSGGTVQELITALRQMDHTEAIEVIQKALSISQSPSHLK
GNAAKALPSSSPPAFADGETGEFYNSKFQDNESTCDSGVETSFRKLSFSYSDSLNSKSSV
RLNKVTLGYGHESSVQSNYIAN
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaagattcctatattatgggagtgtctgatccccagatgtttgcaatggat
cagctcatgggaatgaatgcattatttaataatacaaattacatcacctcagacttacca
ttacgaacagcagatggaccatatcttcagatcatagaacagccaaaacagagggggttt
cgtttccgatatgtatgtgaagggccctcacatggtggacttcctggtgcttctagtgaa
aagaacaaaaaatcataccctcaggtgaaaatctgcaattatgttggacccgcaaaagta
attgtccagttagttactaatgggaaatacgtccacttacatgctcacagcttggtgggt
aaattttgtgaagatggagtgtgcacagttaatgcaggacctaaagatatggttgtaggg
ttcgcaaatcttggaatacttcatgtcacaaagaagaaagtgtttgaaactctggaaatg
cgcatgatagatgcttgcaaaaaaggttacaaccccgggctcctggtgcatcctgaactt
ggctatctgcaggcagaaggatgcggagacagacagctaactgaacgcgagagagaaatc
attcgtcaggcagctgtacagcagactaaagaaatggatctcagcgtggtgcgtctcatg
tttacagcctttctccctgacagcaatggcagtttcacacggaagcttgatcctgttata
tcagatgcaatatatgacagcaaagctcccaatgcttccaacttgaaaatcgtaagaatg
gacagaacagcagggtgtgtaacaggaggggaagagatttaccttctctgcgacaaggtt
cagaaagatgatattcagatacgtttctatgaagaggatgagaatggaggtatgtgggaa
ggctttggagacttttctcctacagatgtacataggcagtttgctattgtgttcaaaaca
cccaagtatcgagatgtcaatatcacaaagccggcatctgtgtttgtacaactgcgtcgg
aaatctgatctagaaacaagtgaaccaaagccttttctctactatccagaaatcaaagat
aaagaagaagtgcaaaggaaacgacagaagctcatgccaaacttctctgatggctatggt
ggcagtggtgcaggaggcggcggcatgtacggagcaggaggtggtggtgctggctctggg
ttcagttatccttcatacggatactctacttttggagggatgcatttccaccctggcaca
acaaagtccaatgctggaatgaaacatggactatcaaatagcacagctggacaagatggc
aagagctctgatgtacaaagtgacaagtgggacgtgaaacatgatgtgaaagcagaaact
atggagaggagtgagtgcagaacctctggtgataatgaggaggagaaggatgctgttttg
tcctgtaaaactgaagtaaatgaagcagattgcaggtggccagatggtctgttcctggaa
aaggccatgcagcttgccaagcgtcactgcaacgctctcttcgattatgccataactgga
gatgtgaagatgctgctggctgttcagcgccatctcactgttgtccaggatgacaatgga
gacaatgtccttcatttagcaataatccaccttcatactgagctggtgaaaaacctcttg
caagtgatgcctgatttgaattataatgacatcattaacatgagaaatgacctttatcag
acccccttgcacctggcagtaatcactaagcaggcagaggtagttgaagacttgctgatg
gctggagcagatgtcagccttctggatcgccacggtaattctgtcttacatttagctgct
accgaaggagacgacaagattttgagtctgctcctcaagcataagaagatatctccaatg
gtcgacctttccaatggtgaaggtctcagtgcaattcacatggtggtgatggcaaatagc
atgtcctgcctcaagcagctgattgcttctggagttaatgtcaatgctcaggaacaaaaa
tctggacgaactgcattgcatttagctgttgaacaagagaacatccctttggcaggctgc
cttttgcttgagggtgatgcagatgtggacagcactacctatgatgggaccactcctctt
cacatagcagctggaaggggctctacaaaattggcagcagttctcaaagcagcaggtgca
aatcctcacattgagaactttgagccattgtttgatctagaagatgtgaaagatgataat
gacgatgatgatgaagggattgtgcctggaacgacaccactggatatggcagccacctgt
gaggtgtatgacatactaaatggcaaaccctacaagtcagcagtggtttcggaggacttc
ctggcacaaggacatttgagggagctgaatgaaagttccaagatgcagctttacaaacta
ctggaattgcccagtccaaacaaaaactggttcactttggcacaaaaactcggtcttggc
atacttaataatgccttcaggttgagcccttctccatcgaaaactctgctagataactat
gaggtttctggtggtacggttcaagagctgatcactgctttgagacagatggatcacaca
gaagccattgaagtcattcagaaagcgctatccatctcacaaagcccatcccacctgaag
ggcaacgcagcaaaagctcttccatcatcatcaccacctgcctttgcagatggagagaca
ggtgagttttataatagcaaatttcaagacaacgaaagcacgtgtgacagtggtgtggag
acctccttccgcaaactgagctttagttactcagactctctgaacagcaagtcatcagta
agacttaacaaagtgaccttgggctatggacatgaaagctcagtgcaaagcaattacata
gccaactag
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integrated database retrieval system
