Apaloderma vittatum (bar-tailed trogon): 104278539
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Entry
104278539 CDS
T08559
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
avit04515
]
104278539
Cell adhesion molecules [BR:
avit04515
]
Cadherins
Protocadherins
104278539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_4
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
104278539
NCBI-ProteinID:
XP_009873850
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
YTKQRIDREALCRRSAKCQLSLEVFANDQEICMIKVEIQDLNDNAPAFPSDQVDMDISEN
AAPGTRFPLTTLDVKSRGDGTKFPELVIQKPLDREEQSHHTLVLTALDGGDPPRSGTVQI
NVRLIDSNDNSPVFEAASYVVELPENAPLGTAVIDLNATDADEGTNGEVLYSFSGYAPER
VRDLFSIDPQSGLIRVKGNLDYEESGLIEIDVQARDLGPNPIPAHCKVTVRLIDRNDNAP
TIGFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGGPGAVPFTLEENY
DNFYTVVTDRPLDREAQDEYNVTIVARDGGNPPLNSTKSFSVRILDENDNPPRFSKNLYV
LQVPENNIPGEYLGSVLAQDPDLGQNGTVSYSILPGHVGDVSIYTYVSVNPTNGAIYALR
SFNYEQTKHFEFRVLAKDSGSPHRESNATVRVTVLDVNDNAPLIVLPALINDTAELQVPR
NAGVGYPVGTVRALDSDFGESGRLTYEIVEGNEEHLFEMDPTSGEIRTLHPYWEELSPVA
ELVVKVSDHGKPSLSAVAKLIVRALAGPLPEAGGPPRGEPQVNGEQHRRPHWDLSLPLIV
TLSTVSIILLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGGGSGGGGGGNGSGGS
KGKKKKISKNDIMLVPSEGEDSRGPLNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVM
YLKPASNNLTVPQGHVGCHTSFTGQGTNASEAPPSRMSIIQTDNFPAEPNYMGSRQQFVQ
SSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSVREALKMKTASTKSQPLEQ
NT seq
2515 nt
NT seq
+upstream
nt +downstream
nt
tacaccaagcagcgcatcgaccgcgaagcgctgtgccggcgcagcgccaagtgccagctg
tccctcgaggttttcgccaacgaccaggagatctgtatgatcaaggtggagatccaggac
ttgaacgacaacgcaccagcgttcccctctgaccaagtggacatggacatctcggaaaac
gctgcgccgggcacccgcttccccctcaccacccttgatgtgaagtcccggggtgatggc
acaaagtttccggagctggtcatccagaagccgttagaccgcgaggagcagagtcaccac
accctggtactgacagcactggacggcggtgacccaccgcgctcgggcacagtgcagatc
aacgtgcgcctcattgattccaatgacaacagccccgtctttgaggcggcctcctatgtg
gtagagctgccagagaatgcacctctaggcactgctgtcatcgaccttaatgccactgat
gctgatgagggtaccaacggagaggtgctctactccttcagtggatacgcacccgagcgt
gtccgtgacctgtttagcattgacccacagagtggcctcatccgtgtcaaaggcaacctg
gactatgaggagagcggcctcattgagattgatgtccaggctcgggacctggggcccaat
cccatccccgctcactgcaaggtcactgtccgcctcatcgaccgcaatgacaatgcaccc
accattggctttgtctctgttcgccagggagccctgagtgaggctgcaccaccgggcacc
gtaattgctctggtgcgggtcactgaccgtgactcaggcaagaatgggcagctccagtgc
cgggtgctaggtggtggcggcgggcccggagctgtccctttcaccctggaggagaactat
gacaacttctacactgtagtcactgaccggcccctggaccgcgaggcacaggacgaatac
aatgtgactattgtggcacgtgatgggggcaatcccccactcaactccaccaagtcattt
tctgtccgaatcctcgatgagaatgacaacccaccccgcttcagcaagaatctctatgtg
ttacaggtgcctgagaacaacatccctggagagtacctgggctctgtcttggcccaggac
cctgacctcggccaaaatgggacagtatcttactccattctgcccgggcatgtgggtgat
gtctccatctatacctatgtctctgtcaaccctaccaatggtgctatctatgccctgagg
agcttcaattatgagcagacaaagcactttgagtttcgtgtgttggccaaagactcgggt
tcgccccaccgcgaaagcaacgctacggtgcgtgtcactgtgcttgatgtcaacgacaat
gcaccgctcattgtcctgcctgccctcatcaatgacaccgctgagctgcaggtgccacgc
aatgctggggtgggttacccagtgggcaccgtccgtgccctggacagtgactttggggag
agcgggcgcctcacgtatgagattgtggaaggcaatgaagagcacctctttgagatggac
cccactagtggtgagatacgcaccttgcacccctactgggaagagctcagccctgtggct
gaactggtggtaaaagtcagtgaccatggcaaacccagcctctctgcagtggccaagctc
attgtcagagccttggcagggcccttgcccgaggctggcgggccgccgaggggggagccg
caggtgaatggcgagcagcatcggcgaccacactgggacttgtcgctgcccctgatcgtg
acgctgagcactgtatccatcatcttgctggctgccatgatcactattgccgtgaagtgc
aagcgagagaacaaggagatccgcacctataattgtcgcattgccgagtatagccaccct
cagctgggaggagggggaggcagtggcgggggaggaggaggcaatggcagtggagggagc
aagggcaagaagaagaagatcagcaagaatgacattatgctggtgcccagtgagggcgag
gacagccggggccccctcaatgtcatgaatgtggtgagcagcccatctctggccacctca
cccatgtactttgactaccagacccgcctgcccctcagctctcccaggtctgaggtgatg
tacctgaagcccgcctccaacaacctgactgtaccccagggacatgtgggctgccacacc
agcttcacagggcaagggactaacgccagcgaggctcccccgagccggatgtccataatt
cagacagacaattttcccgcagagcccaattacatgggcagcaggcagcagtttgttcaa
agtagctccacgttcaaggatccagaaagagccagcttgagggacagcgggcatggggac
agtgatcaggctgacagtgaccaagacactaacaaaggctcctgctgtgacatgtctgtt
agggaggcactcaagatgaaaactgcttcaactaaaagccagccacttgaacaag
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