Apaloderma vittatum (bar-tailed trogon): 104278604
Help
Entry
104278604 CDS
T08559
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104278604 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104278604 (DHX36)
03012 Translation factors [BR:
avit03012
]
104278604 (DHX36)
Enzymes [BR:
avit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104278604 (DHX36)
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104278604 (DHX36)
Translation factors [BR:
avit03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104278604 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
AAA_14
AAA_23
Sir1
PhoH
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
104278604
NCBI-ProteinID:
XP_009873931
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MDERREEQIVQLLNTVQSKNEKEQEAMSWWSGDEEGPTPEQPAKVKPDAEKAPVRQRPVL
EKTCLDRDVEYLFEKNEQDADLDEQLKEDLRKKKSDPRYIEMQRFREKLPSYGMRKELIN
LINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCRIVCTQPRRISAISVAERVAA
ERAEACGSGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKLLSSISHVVLDEIHE
RNLQSDVLMSIIKDLLSIRLDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPVVEYLL
EDVIEKLRYTPENTDRRPRWKKGFMQGHVSRPEKEEKEEIYRERWPDYLRQLRGRYSAST
IDALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDR
FIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFD
TQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEE
LCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPV
EPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLT
VVNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFAEHLLAAGFVNSRDPKD
PKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEE
TEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQETIAVDEWIVFQS
PARIAQLVKNLRQELDDLLQEKIENPHPVDWNDIKSRDTAVLTAIIDLITTQENESARNY
APRFQSERYS
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcgcagggaagagcaaatcgtgcagctgttgaacaccgtccaaagcaaaaat
gagaaagagcaggaagccatgtcctggtggtctggggatgaagaaggacctaccccggaa
cagcctgcaaaagtgaaaccagatgctgaaaaagccccggtgaggcagagaccagtgttg
gaaaaaacatgtcttgatcgagacgtggaatatctttttgagaaaaacgagcaggatgct
gatttggatgagcagcttaaagaagacctaaggaagaaaaaatccgatcctagatacatt
gaaatgcagaggttccgggagaagctcccttcatatggaatgagaaaggaacttataaac
ctcataaacaataatcgagtaaccgtgataagtggtgaaactggttgtgggaagacaacg
caagtgacacagttcatcctggatgattacatcgagcgagggaagggctccacgtgcaga
atcgtttgtactcagcccaggaggatcagcgccatctcggtggctgagagagtcgctgct
gaaagggcagaagcatgtgggagtggcaagagcacagggtaccaaattcgtctgcagagt
cgattaccaaggaaacaaggttcaattttatactgtaccacaggaatcgtcctgcagtgg
ctccagtcagataagctcttgtccagtattagtcatgtagtccttgatgaaattcatgaa
agaaatctgcagtcggatgttttgatgagcattattaaagatcttttgagtattcgtttg
gatctcaaagtgatactgatgagtgctactttaaatgcagagaagttttcggagtatttt
gataattgtccgatgattcacatacctgggttcactttccctgtggtggaatatcttctg
gaagatgtaattgagaagttacggtatactccagaaaatacagaccgtcggccgcggtgg
aagaaaggcttcatgcaaggacatgtaagcagaccagaaaaagaagaaaaagaggaaatc
tacagggaacgatggccagactacttaaggcagctgcggggcaggtattcagcgagtact
atagatgccctggaaatgatggacgatgacaaggttgacctggacctcatagcagcactt
atcagacacatcgttctggaggaagaggatggtgcaattctagtgtttcttccaggctgg
gacaacattagcactttgcatgatctcttgatgtcacaagtcatgtttaagtcagatagg
tttattatcatacctttacattcattgatgcctactgttaaccagactcaggtttttaag
aagaccccgccaggagtaaggaaaatcgtgattgctaccaacatcgcagagactagcatt
acaatagatgacgtcgtgtttgtgatagacggcgggaagataaaggagactcactttgac
acgcagaacaacatcagcaccatggccgcagagtgggtcagtaaagccaacgccaagcag
aggaaggggcgagcaggaagagttcagccaggccactgttaccatctatacaatgggcta
cgtgccagccttctagatgattaccagttaccagagatcctgaggacgcctttggaagaa
ctctgtttacaaatcaagattctaaagctagggggaattgcttactttctgagcaaactg
atggatccaccgtctcgtgatgctgtaatgttggccataaatcatctaatggagctgaat
gctctggacagacaggaggagctgactccgctaggtgtccatctggcacgactcccagtt
gaaccgcacattggaaaaatgatcctctttggagctttattctgctgcttggatccagta
ctgacaatcgcagctagcctcagcttcaaagacccttttgtcatccctctgggcaaagag
aaagtagcagatgcaagaagaaaggagctgtcaaagaacactaaaagcgatcatctaact
gtggtgaatgcattcacgggctgggaagagactcgacgtcgtggtttcagaactgagaaa
gactattgctgggagtatttcctttctccgaatactctgcagatgctgcataacatgaaa
ggacagtttgctgagcacctccttgcagctggatttgtgaatagcagagaccccaaggat
cccaaatccaataccaactcagataacgagaagttgctcaaagcagtcatctgtgctggc
ttatatccgaaggttgcaaagatccgaccaagcttcagcaaaaagagaaaaatggtgaaa
gtttgcaccaagacagatggaacagttaatattcaccctaaatcggttaacgtggaagaa
acagagttccattataactggctggtgtaccacctgaagatgagaactagcagtatttac
ttgtatgattgtacggaggtctcgccgtactgtctgttgttctttggaggagatatatcc
attcagaaggataaagatcaggaaaccatcgctgtggatgaatggattgttttccagtcc
cccgcaagaatagcgcaattagttaagaatttaagacaagagctcgatgatcttctacaa
gaaaaaatagaaaacccacatccagtggactggaatgatattaaatccagggatacagca
gtgctgacagctattatagacttaatcacaacacaggagaacgaaagtgccagaaactat
gctccacggttccagagtgaacgctatagttga
DBGET
integrated database retrieval system
