Apaloderma vittatum (bar-tailed trogon): 104278646
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Entry
104278646 CDS
T08559
Name
(RefSeq) LOW QUALITY PROTEIN: cohesin subunit SA-2-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104278646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avit03036
]
104278646
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104278646
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
AdoHcyase_NAD
Motif
Other DBs
NCBI-GeneID:
104278646
NCBI-ProteinID:
XP_009873976
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MIAAPEIPTDFTLLQESETHFSSXXXXXXXXXXFEDIEGKTQKQGKGKTCKKGKKGPAEK
GKSGNGGGKPGGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIAL
LDLINFFIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSS
FCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVA
LNLSINMDNTQRQYEAERNKIIGKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFV
HRYRDAIAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGL
YYNKELNSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVY
HLVYSAHRPVAVAAGEFLYKKLFSRRDPEDDGILKRRGRQSPNANLVKTLVFFFLESELH
EHAAYLVDSMWDCATDLLKDWECMNSLLLEEPLNGEEPLTDRQESALIEIMLCTIRQAAE
CHPPVGRGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQY
FDLEIYTTGRLEKHLDALLRQIRDIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDIAR
SQLIDELADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSRWDLFGCNYK
LLKTGIENGDMPEQIVIHALQCTHYVILWQLAKVTESSSTKEDLLRLKKQMRVFCQICQH
YLTNVNTAVKEQAFTILCDVLMIFSHQIMTGGRDLLEPLVYTPDSSLQSELLSFILDHVF
IDQDDDNNSADGQQDDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYN
DYGDIIKETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSPTFSGIKELARR
FALTFGLDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQD
KRTVYVYLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRNKK
TKPATGKRKVPEAEESSSSDSVWLNREQTMHTPVMMQTPQLTSTIMREPKRLRPEESYMG
VYPMQPEHHQAPLDYNTQVTWMLAQRQQEEAARQQQERAAMNYVKLRTNLQHAIRRGTSL
MEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMD
ES
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagctccagaaataccaactgattttactctccttcaggagtctgaaacacac
ttctcttccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttgaagatattgaaggaaaa
acccaaaaacaaggaaaaggaaaaacctgtaaaaaaggaaaaaaaggaccagcagagaag
ggaaaaagtggaaacggaggagggaagcctggtggcccgaatcggatgaatggacatcat
caacagaatggtgtggaaaacatgatgctgtttgaggtagttaaaatgggcaagagtgct
atgcagtctgtagtggatgactggatagagtcatacaaacatgacagagatatagcgctg
cttgatctcattaacttctttattcagtgttcaggctgcaaaggcgttgttacagcagag
atgttccgacatatgcagaattctgaaataatccgaaaaatgactgaggaatttgatgag
gatagtggagattatccgctaaccatggctggtccccagtggaagaagtttaaatccagt
ttttgtgagttcattggagtactcgtccgacaatgccaatatagcatcatatatgatgaa
tatatgatggatactgtcatttcactgcttacggggctgtcagactcacaagtcagagca
tttcggcacactagcacactggcagccatgaagcttatgactgcattagtgaatgtggca
ttaaatcttagtattaacatggacaacacacagcggcagtatgaagcagaacgaaataaa
ataattgggaaacgagccaatgataggctggaactcttactacagaaaagaaaggagctt
caggaaaaccaggatgaaatagaaaacatgatgaatgcaatatttaaaggtgtttttgtg
catagataccgagatgcaattgctgaaataagagccatctgtattgaagagattgggata
tggatgaagatgtacagtgatgcctttctcaatgacagctacttaaaatatgtagggtgg
actatgcatgataagcaaggagaagtaagactcaaatgcctaactgctttgcaagggctt
tactacaataaagagcttaattccaaattggaactctttaccagtcggttcaaggataga
attgtgtctatgactcttgacaaagaatatgatgttgcagtccaagcaataaaattactc
actcttgttttacagagtagtgaagaagttctgactgctgaagactgtgaaaatgtctac
catctggtttattcagctcaccggccagtagcagttgctgcaggggaatttctttataaa
aaacttttcagccgcagagatcctgaagatgatggaatactcaaaagaaggggaagacaa
agtccaaatgctaatcttgtcaagacattagtgtttttctttttggaaagtgagttgcat
gaacatgctgcttatcttgtggacagcatgtgggactgtgcaacagacctcttgaaggac
tgggaatgtatgaacagtctgctgctggaggagcctctcaatggagaagaacctttaacg
gatagacaggaaagcgcgctgattgaaataatgctttgtacaattcggcaagcagctgaa
tgtcatcctcctgtgggaagaggaacggggaagagggtgctgacagcaaaggaaaagaaa
acgcagttggatgacaggacaaaaattaccgaactttttgcagtggcccttcctcagttg
ctagcaaagtattctgtagatgcagaaaaagtcaccaacttactgcagttgccacagtac
tttgatttggaaatttatacaacagggaggttggaaaagcatttggatgccttactgcga
caaatccgggatattgtggagaagcacacagatacagatgttttggaagcctgttcaaaa
acataccacgctctctgtaatgaggaattcacaatctttaacagggttgacattgcaaga
agtcagttaatagatgaattggcagacaagtttaatcgacttcttgaagacttcctgcaa
gagggtgaggaacctgatgaagatgatgcgtatcaagtcttgtcaacactgaagagaatc
accgcttttcacaatgctcatgacctgtcaagatgggacttgtttggctgcaactataag
ttattgaaaactggtattgaaaatggagacatgccagagcagatcgttatccatgcactg
cagtgtactcattatgtaatcctttggcagctagcaaaagttactgaaagcagttccact
aaggaggaccttctccgtctaaagaagcagatgagagtgttctgtcaaatttgtcaacac
tacctgaccaatgtgaacacggctgttaaggaacaggctttcacaattctgtgtgatgtg
ttgatgatcttcagtcatcagattatgacaggaggacgtgacctgttggaaccacttgtt
tacactcctgattcttcgctgcaatctgaactgctcagttttattttggatcatgtcttc
attgatcaggatgatgataataatagtgcagatggacagcaggatgatgaagctagcaaa
attgaagcattgcacaaaagaagaaatctacttgcagctttttgtaagctcattgtatat
actgtggtggaaatgaatacagctgcagacattttcaagcaatatatgaagtattacaac
gactatggtgatattattaaagaaacaatgagtaaaacaagacagatagacaaaatccag
tgtgctaaaacacttattcttagcttgcagcagcttttcaatgaaatgattcaagaaaat
ggttataattttgacagatcatcgccgacattcagtggcataaaggaacttgctcgacgt
tttgctttaacgtttggactggatcagctgaaaacaagagaagctattgctatgttacac
aaggatggcatagaatttgcttttaaggagcctaatccacaaggtgagagccacccacca
ttaaatttggcgtttcttgatattctgagtgagttctcctccaaacttctcagacaagac
aaaagaacagtgtatgtttacctggagaagtttatgaccttccagatgtctctacgaaga
gaagatgtgtggcttcctctcatgtcctacagaaactctttattagctggtggggatgat
gatactatgtcagtgattagtggaattagtagtcgaggatctacagtaagaaataagaag
acaaagccagcaacagggaaacggaaagtacctgaagctgaagaaagcagcagtagtgac
agtgtgtggctgaacagggagcagacgatgcacacacccgtcatgatgcagacacctcag
cttacttccacaatcatgagggagcccaagagattgcgacctgaagaaagttacatgggt
gtctatcctatgcagccggaacaccaccaagctccgctcgattacaacacgcaagtaacg
tggatgttggctcaaaggcaacaggaagaagccgcgcgacaacaacaggagagggcagcg
atgaactacgtcaagctgagaaccaacttgcaacatgctattcgacgtggcacaagtcta
atggaagatgatgaagagccaattgttgaagacgtgatgatgtcatcagaagggcggatt
gaagatctcaacgaaggcatggattttgacaccatggacatagacctaccgccatcaaag
aacaggagagaaagaacggaactaaaaccagatttctttgaccctgcttcaatcatggat
gaatcg
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