Apaloderma vittatum (bar-tailed trogon): 104278942
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Entry
104278942 CDS
T08559
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase DTX4-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104278942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
avit04121
]
104278942
Enzymes [BR:
avit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104278942
Ubiquitin system [BR:
avit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104278942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-rbx1
zf-RING_5
zf-RING_11
zf-ANAPC11
zf-C3HC4_2
zf-RING_Vps41
zf-C3HC4_4
zf-UDP
zf-RING_16
PHD_NSD
RING_XB3-XBAT31
ZNF512_C2HC
PHD
zf_RING_Vps8_fungal
zf-RING_4
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
104278942
NCBI-ProteinID:
XP_009874372
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
VPTVPVKNLTGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSEIQSIPGI
SHXXXXXXXXXXXXXTKKQAKKGKTSEEVLKKYLQKVRHPPDEDCTICMERLSAPSGYKG
PQPAIKPDLVGKLVKCGHVFHLHCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPGKME
YHIIPHALPGHSDCKTIRIIYNIPPGVQGPEHPNPGKSFTARGFPRHCYLPDSEKGRKVL
TLLLVAWDRRLIFAIGTSSTTGESDTVIWNEIHHKTEFGSNLTGHGYPDINYLDNVLAEL
AAQGITEESLVQEKD
NT seq
949 nt
NT seq
+upstream
nt +downstream
nt
ggtccccaccgtacctgtgaagaacctcactggctccagcccggtcaacccagcactagc
agggatcacagggatcttaatgagtgcggcaggactgcccgtctgcctgacacggcctcc
caagctggtgttgcaccccccacccgtcagcaaaagtgagatccagtccatccctggcat
ctcccacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaccaagaaacaggc
caagaagggtaaaacctcagaggaggtactgaaaaaatacctgcagaaggtgcggcaccc
accagatgaggactgcaccatctgcatggagcgcctctctgcgccctctggctacaaggg
accccagccagccatcaagcccgacctggtggggaaactggtgaaatgtggccacgtctt
ccacctccactgcctggtcgccatgtacaacaacggcaacaaggatggaagcctgcagtg
tcccacctgcaaaaccatctatggggtgaagacgggaacacagcctccagggaagatgga
gtatcacatcatccctcatgcactgcctggccactcggactgcaaaaccatccgcatcat
ctacaacatccccccaggggtgcagggaccggagcatccaaaccctgggaagagcttcac
tgcccgcggcttcccccggcactgctacctgccagacagtgagaagggcagaaaggtact
gacgttgctgctggtagcctgggaccggcgcttgatcttcgccattgggacctccagtac
cacgggagagtcggacacagtgatctggaacgagatccaccacaagacagagtttgggtc
caacctcactggccatggctaccccgacatcaattacctggacaacgtcctggccgagct
cgcggcccagggcatcacagaggagagcctggtgcaggagaaggactga
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