Apaloderma vittatum (bar-tailed trogon): 104279075
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Entry
104279075 CDS
T08559
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104279075 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avit02000
]
104279075 (SLC6A4)
Transporters [BR:
avit02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104279075 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
104279075
NCBI-ProteinID:
XP_009874547
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MEKKATSNETEPLTSKKDVSDCNEGEDCKENGLLVRNPKSALRLVEDGNKVHPGQGAKGE
AAQISNGYSGVPSSVPCGGMAEAEDGQCAAPAATTTTTTTTSTTCGAEGQQQLMELEDRE
TWSKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALG
QYHRNGCISIWRKICPIFKGIGFAICIIDLYIASYYNTIMAWAFYYLVSSFTAELPWTSC
TNAWNTGNCTNYFSKDNVSWSLHSISPAEEFYTRRVLQVHRSNGLDNLGGVSWQLTLCLL
LIFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYVKPDWQKL
LATEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCVTSFVSGFVIF
TVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTF
AGLEGVITGVLDEFPHVWSKRRELFVLGLIIICFLGSLATLTFGGAYVVKLFEEYATGPA
VLTVVFLEAVAVAWFYGITQFCNDVKEMLGFTPGWYWRVCWVVISPIFLLFVTCSFLSNP
PQLRLFDYNYPYWTTVVGYCIGTSSVIWIPIYMVYRLIITPGTLKERILKSITPETATEI
PFGDIRMNAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggcaacaagcaatgagactgagccgctgacttccaagaaagatgtctca
gactgtaacgaaggagaagattgtaaagagaatggactgctggtcaggaacccgaaatct
gccttgcggctagtagaggatggcaacaaagtccaccccggccagggagctaaaggggag
gcagcccagatctccaacggttattccggggttccgagctctgtgccctgcggcgggatg
gcagaggcggaggacggccaatgcgccgccccagcagccacaaccaccacgacaaccacc
acctccaccacctgcggagcagaagggcagcagcagctgatggaactggaagacagagag
acctggagtaaaaaaattgactttttgctctctgtcattggatatgcagtggatctgggg
aacgtgtggagatttccttacatttgctatcagaacgggggaggagcattcctcattcct
tacacaatcatggccatctttggagggattcctctcttctatatggaactagcactagga
cagtaccacaggaatgggtgtatttcaatttggagaaaaatatgtcctatattcaaagga
attggctttgccatctgtataatagatctttacatagcttcctactacaacaccatcatg
gcttgggccttttactacctcgtatcctccttcacggcggagctgccatggaccagctgc
acaaacgcctggaacacgggcaactgcacgaactacttcagcaaggacaatgtcagctgg
tccctgcactccatctctcccgcagaagaattttatacccgccgagttctacaagtgcac
aggtccaatgggctggataacctggggggcgttagctggcaattgaccctctgtttattg
ttaatcttcaccattgtatacttcagcatctggaaaggtgtcaaaacatctggcaaggtg
gtgtgggtgactgccacattcccttacatcatactcttcatcctgctcgtgagaggagca
actttgcccggggcttggagaggtgttctctactacgtgaaacctgactggcagaaactc
ctggccacggaggtctgggtggacgcagcagctcagatctttttctcccttggaccaggt
tttggggtcctgttggcttatgccagctacaacaaattccataacaactgctaccaagat
gctctggttaccagtaccgtgaactgtgtgactagttttgtgtctggatttgtcattttc
accgtgctgggatacatggctgagatgaggaacgaagatgtatcggaagttgccaaagac
actggacccagcctcctcttcattacgtacgctgaggccatcgcaaacatgcccgcttcc
accttctttgccatcatctttttcctgatgttactcacgctgggattagacagcacgttt
gcaggactagagggagtgattactggagtactggatgaattcccccatgtctggagcaaa
cgcagggaactgtttgtccttggtctgatcatcatttgctttttggggtcgttagcaacc
ctgacatttggaggcgcatatgtggtgaaactgtttgaagaatacgccactggtccagct
gtcctaacggtcgtgtttctggaagcagttgctgtggcctggttctacggcatcacccag
ttttgcaatgacgtgaaagaaatgctaggcttcaccccgggctggtactggcgagtttgc
tgggtagtaattagtcccatcttccttctgtttgtcacttgcagctttctgtcgaatcct
cctcagctgcggctttttgattataattatccctactggaccacagtagtgggttattgc
ataggaacctcttctgtcatctggattccaatctacatggtttatcggttgatcatcact
ccagggacacttaaggagcgtattctgaaaagcattactccagaaacagctacagaaatt
cctttcggagacatccgcatgaatgcagtataa
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