KEGG   Apaloderma vittatum (bar-tailed trogon): 104279190
Entry
104279190         CDS       T08559                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-9-like
  KO
K16498  protocadherin delta 1
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:avit00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    104279190
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:avit01009]
    104279190
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:avit04515]
    104279190
Protein phosphatases and associated proteins [BR:avit01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104279190
Cell adhesion molecules [BR:avit04515]
 Cadherins
  Protocadherins
   104279190
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 RET_CLD1 Big_9 MAP17 V_ATPase_I EphA2_TM RCR DUF6249 7tm_3 Cadherin_4 DUF6377
Other DBs
NCBI-GeneID: 104279190
NCBI-ProteinID: XP_009874687
LinkDB
Position
Unknown
AA seq 1030 aa
MDLRDFYLLTALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSNTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPSPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRXKKNHFSASECSSQGGFKTKGPLHTRQVNEHFYWSIS
TAYKCPINQY
NT seq 3093 nt   +upstreamnt  +downstreamnt
atggacctgagggatttttacctgttgactgctttgattgcctgtttaaggctggattct
gctatagctcaagaacttatttacactattagagaggaactgcctgaaaacgtacccata
gggaacataccaaaggacctgaacatttctcacataaatgctgccacggggaccagtgcc
agccttgtctacagactggtgtctaaagcaggggatgcccctctggtcaaagtatccagt
aacactggggaaatctttacgacatctaacagaatagaccgagaaaaactctgtgctgga
gcttcctatgcagaagaaaacgagtgtttttttgaacttgaggtggtgattctccccaat
gacttttttaggcttatcaaaataaaaatcattgtaaaggatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgacacaggtttcaacggcgtgcagcactacgag
ttgttaaacgggcagagtgtctttggactggatattgtagaaactccagaaggagagaaa
tggcctcagctgattgtgcagcagaacttggacagagaacaaaaggacacctacgtgatg
aaaatcaaggtggaggatggaggtaccccccagaaatccagcacagccatcctacaagtc
acagtaagtgatgtcaatgataacaggccagtgtttaaagagagtcaagtagaggttcat
ataccagagaatgcccctgtaggcacttctgtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatacatttttggtgcccaagtcgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggctagtgatggtagctctacaccggcc
cgggcaaccgttaccatcaatgtcactgatgtaaacgataaccctcctaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcccatcaat
acaaagattgccctaattacagtttcagataaggacactgatgtgaacggcaaagtgatc
tgtttcattgagagagaggtccccttccacttgaaggcagtatatgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcttctgattctggtaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttcggaa
aacaaccgtcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcgaaag
acgggagttttgacagcctccagagtttttgatagagaagagcaggaacgtttcattttc
actgttacggcccgagacaatggcacccctcctttgcagagtcaagcagctgtaattgtt
actgtgttggatgaaaatgacaacagtcccaaatttactcataatcacttccagtttttt
gtgtcagagaacttaccaaagtatagcacagtgggggtgatcacggtgaccgatgcagat
gctggggaaaataaagcagtgaccctctccatcctgaatgacaatgaaaactttgtgctg
gatccatactctggagttataaagtccaatgtctcttttgatcgagagcagcagagctcc
tacacctttgatgttaaggcggtggatggagggcaacctcctcgctcttctacagcgaaa
gtaaccataaacgtcatggatgttaatgataacagccccgttgtcatctacccaccttct
aatacttcttttaaactagtgccactctcagcaattccaggatcggttgtagccgaagtc
tttgctgtggatatagacactggcatgaatgccgagctgaagtacacaattgtaagtgga
aataacaagggcttgtttcggattgatccggtgacaggtaatatcactctggaagaaaaa
ccatcgccgaatgatgtggggctgcatcgcttagttgtcaacataagcgatttgggttat
cccaagtccctgcatacactcgtgcttgtgtttttgtatgtaaatgatactgctggaaat
gcctcttatatttatgacttgatacgcaggactatggaaacacctttggaccggaacata
ggggacagtagccaaccctaccaaaacgaggactatctcacaatcatgatcgctattgtg
gcaggtgccatggttgtcatagtggtaatatttgtcacagttctcgttcgctgtcgacat
gcgtccagattcaaagccgcccagaggagcaagcaaggtgctgagtggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccaaagagctct
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgattgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgatctcgccaagcattacaaa
tctgcctctccgcagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaaa
caccatgtgattcaggaactcccgttggacaacacctttgttggtggttgtgacaccctt
tccaaacgcnnaaaaaaaaatcacttcagtgcctcagagtgcagttcccaaggaggcttc
aagacaaagggccccttacacaccagacaggtaaacgagcacttttactggtctataagt
actgcatacaagtgcccaatcaaccagtattaa

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