Entry |
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Name |
(RefSeq) LOW QUALITY PROTEIN: protocadherin-9-like
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KO |
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Organism |
avit Apaloderma vittatum (bar-tailed trogon)
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Pathway |
avit03273 | Virion - Lassa virus and SFTS virus |
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Brite |
KEGG Orthology (KO) [BR:avit00001]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104279190
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:avit01009]
104279190
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:avit04515]
104279190
Protein phosphatases and associated proteins [BR:avit01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104279190
Cell adhesion molecules [BR:avit04515]
Cadherins
Protocadherins
104279190
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
1030 aa
MDLRDFYLLTALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSNTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPSPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRXKKNHFSASECSSQGGFKTKGPLHTRQVNEHFYWSIS
TAYKCPINQY |
NT seq |
3093 nt +upstreamnt +downstreamnt
atggacctgagggatttttacctgttgactgctttgattgcctgtttaaggctggattct
gctatagctcaagaacttatttacactattagagaggaactgcctgaaaacgtacccata
gggaacataccaaaggacctgaacatttctcacataaatgctgccacggggaccagtgcc
agccttgtctacagactggtgtctaaagcaggggatgcccctctggtcaaagtatccagt
aacactggggaaatctttacgacatctaacagaatagaccgagaaaaactctgtgctgga
gcttcctatgcagaagaaaacgagtgtttttttgaacttgaggtggtgattctccccaat
gacttttttaggcttatcaaaataaaaatcattgtaaaggatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgacacaggtttcaacggcgtgcagcactacgag
ttgttaaacgggcagagtgtctttggactggatattgtagaaactccagaaggagagaaa
tggcctcagctgattgtgcagcagaacttggacagagaacaaaaggacacctacgtgatg
aaaatcaaggtggaggatggaggtaccccccagaaatccagcacagccatcctacaagtc
acagtaagtgatgtcaatgataacaggccagtgtttaaagagagtcaagtagaggttcat
ataccagagaatgcccctgtaggcacttctgtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatacatttttggtgcccaagtcgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggctagtgatggtagctctacaccggcc
cgggcaaccgttaccatcaatgtcactgatgtaaacgataaccctcctaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcccatcaat
acaaagattgccctaattacagtttcagataaggacactgatgtgaacggcaaagtgatc
tgtttcattgagagagaggtccccttccacttgaaggcagtatatgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcttctgattctggtaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttcggaa
aacaaccgtcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcgaaag
acgggagttttgacagcctccagagtttttgatagagaagagcaggaacgtttcattttc
actgttacggcccgagacaatggcacccctcctttgcagagtcaagcagctgtaattgtt
actgtgttggatgaaaatgacaacagtcccaaatttactcataatcacttccagtttttt
gtgtcagagaacttaccaaagtatagcacagtgggggtgatcacggtgaccgatgcagat
gctggggaaaataaagcagtgaccctctccatcctgaatgacaatgaaaactttgtgctg
gatccatactctggagttataaagtccaatgtctcttttgatcgagagcagcagagctcc
tacacctttgatgttaaggcggtggatggagggcaacctcctcgctcttctacagcgaaa
gtaaccataaacgtcatggatgttaatgataacagccccgttgtcatctacccaccttct
aatacttcttttaaactagtgccactctcagcaattccaggatcggttgtagccgaagtc
tttgctgtggatatagacactggcatgaatgccgagctgaagtacacaattgtaagtgga
aataacaagggcttgtttcggattgatccggtgacaggtaatatcactctggaagaaaaa
ccatcgccgaatgatgtggggctgcatcgcttagttgtcaacataagcgatttgggttat
cccaagtccctgcatacactcgtgcttgtgtttttgtatgtaaatgatactgctggaaat
gcctcttatatttatgacttgatacgcaggactatggaaacacctttggaccggaacata
ggggacagtagccaaccctaccaaaacgaggactatctcacaatcatgatcgctattgtg
gcaggtgccatggttgtcatagtggtaatatttgtcacagttctcgttcgctgtcgacat
gcgtccagattcaaagccgcccagaggagcaagcaaggtgctgagtggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccaaagagctct
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgattgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgatctcgccaagcattacaaa
tctgcctctccgcagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaaa
caccatgtgattcaggaactcccgttggacaacacctttgttggtggttgtgacaccctt
tccaaacgcnnaaaaaaaaatcacttcagtgcctcagagtgcagttcccaaggaggcttc
aagacaaagggccccttacacaccagacaggtaaacgagcacttttactggtctataagt
actgcatacaagtgcccaatcaaccagtattaa |