KEGG   Apaloderma vittatum (bar-tailed trogon): 104279218
Entry
104279218         CDS       T08559                                 
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
  KO
K06237  collagen type IV alpha
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04382  Cornified envelope formation
avit04510  Focal adhesion
avit04512  ECM-receptor interaction
avit04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:avit00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104279218 (COL4A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104279218 (COL4A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104279218 (COL4A3)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    104279218 (COL4A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:avit04147]
    104279218 (COL4A3)
   00536 Glycosaminoglycan binding proteins [BR:avit00536]
    104279218 (COL4A3)
Exosome [BR:avit04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   104279218 (COL4A3)
Glycosaminoglycan binding proteins [BR:avit00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104279218 (COL4A3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 104279218
NCBI-ProteinID: XP_009874727
LinkDB
Position
Unknown
AA seq 1607 aa
GEKGFPGAPGPPGHRGFPGPEGPPGPQGPKGSPGLTGLVGPKGIRGLPGIPGFSGPPGLP
GEPGTVGPPGRPGVPGCNGTKGDQGFPGPPGRRGPPGVAGVAGIKGEKGCAADGYYQEYG
AKGDPGLPGMPGLQGAQGAQGYPGELGPPGPPGALGLMGLKVIGTKGRKGDTGLTGPPGP
PGTVIVTLSGPDNMTDLKGEKGEKGSRGLPGPMGFTGPVGDSQSEKGDRGEPGAQGKPGK
DGAPGPPGLPGQKGEQGKPGLTGRQGAKTEYYDIVVGEKGDEGPPGPPGPKGQRGMPGPQ
GPAGVPGRPGVTRPGLRGPPGFPGPRGIKGEKGQSGVCIVGPPGLPGVAGRPGSVGLPGP
PGEPGGVTFRTGSPGLPGEPGRTGPPGPPGDVGMKGEEAYVCTECSYVAGVPGFPGSPGP
QGQVEKEQQVQKVLQARQEHQGFQELKDLQGLEEIKVVKDQKVSQDMCIQKGRKVSEEIQ
GPGETEEEKVQVDFWEDLALKDPRVLKGLAGSKGDRGLPGLPGSPGLPGEMGLPGLPRYG
PQGIRGFKGSKGMPGPPGLPGEAGPKGETTVITPLPALAGPQGPDGLPGPPGVPGRIGAR
GQRGDSGHPGPTGDTGFPGLGFPGNPGPKGDKGLAGSRGSPGCEGKIGDPGRAGSLGQPG
QKGDPGMVIPGEPGRLGSPGAHGSPGSKGDRGFPGLPGLPGRAGHDGDDGLRGDRGSPGV
LGDPGFPGKPAECRIGLPGLQGGQGATGPPGGRGLQGSKGELGLPGLSIPGIYGEPGEPG
LIGLQGSAGLPGPKGQPGRPGISGVPGSRGDPGLMGRLGIPGAPGMAGRPGSPGVRGSSG
FPGLKGRKGFLGAKGEPGDKGFSGPSETLVGIGDKGERGLKGVQGRMGLKGEKGNAGVHG
PPGADGAGGMPGLPGVKGFMGLPGIPGGQGFPGAPGSKGDMGIPGPKGQKGSPGFPGPSG
DPGLPGYSGFPGDKGDPGYPSPGPPGEPGPKVQREIQAPQDFWAAKEKKDPKVIQAVKEY
PDHMGSEERLDVQESQGSMDLLEVLVLEDSRAAPDSRASLAPPGLLENLEEMDLQATEVT
KVGMACPVPQEGRENQEHQGEESLAFEVLLVVEQGGFGDFSMPKTKAEFYLCGIKGDMGL
PGFPGPPGMKGHQGDQGPVGPPGLVGFPGLQGTTGMAIPGQKGNRGVAGAPGFPGPPGLP
TPSMKGSKGDRGADGVPGPTGPIGDTGPPGPKGIEGRSGYPGARGHPGFLGFPGVKGEKG
NPGPTGPQGAAGPRGPKGQHGLPGVPGKIFSVPGSKGPPGLPGIPGTPGDQGIQGIPGLQ
GPKGVKGLPGSFGHPGQRGLPGPKGDRGFPGQRGQPGLVGFPGLQGLPGSPGTMIAGPTR
KGFIFTRHSQSTSIPSCPLGTAQIYVGYSLLFVQGNERAHGQDLGTAGSCLQRFTTMPFL
FCSTNDVCSFASRNDYSYWLSTAAVIPADMAPISGRALEPHISRCVVCEGAAMVLAVHSQ
TTLVPACPEGWMSLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRAIPFIECHGRGTCN
YYSNSYSFWLASLNPRRMFRRPLSQTLKAGELENIISRCQVCMKRPL
NT seq 4824 nt   +upstreamnt  +downstreamnt
ggtgaaaaaggctttcctggtgctccaggtccacctggtcatagaggctttcctggtcca
gaagggcctccagggccacagggcccaaagggttctccagggcttacaggcttagttgga
cccaaaggtatacgaggactcccgggaatacctggcttttcaggtcccccaggccttcca
ggtgaaccaggaactgttggtcctcctgggcgcccgggtgttccaggatgcaacggcaca
aagggtgaccaaggctttccaggccccccaggcagaagaggtcctccaggcgttgccggt
gttgctggcatcaaaggagagaaggggtgtgctgcagatggatattaccaagagtatggt
gcgaaaggtgatcctggattgccgggaatgcctgggcttcagggtgcccagggtgctcaa
ggatatcctggggaacttggaccaccgggccctccgggagctttaggtcttatgggactg
aaagtaataggaaccaaaggaagaaagggtgacactgggttaactggaccccctgggcca
ccaggaactgttatcgtaacgctaagtggaccagacaacatgacggacttgaaaggagag
aaaggagaaaaaggatcaagaggacttcctgggccaatggggtttacagggccagttggt
gattctcaaagtgaaaagggagaccgaggagaacctggggcccagggtaaacctggaaaa
gatggtgccccgggtccacctggcttaccgggacaaaagggtgaacagggcaaaccggga
ctgactggcaggcaaggagctaagacggagtattatgatattgtggttggtgaaaaagga
gatgaaggaccccccggacctccaggaccaaaaggtcaacgtggcatgcctgggccacag
ggtcctgctggagttcctggtagaccaggtgtgacaagacctggtctgagaggcccccct
ggatttcctgggccaagaggaataaaaggagagaaaggacaatctggcgtgtgtattgta
ggccctccagggctgcctggtgtcgctggcaggcctgggtctgttggattaccaggtcct
ccaggagaaccaggcggggtaacatttagaacaggctcaccaggacttcctggagagcca
gggcgtacaggacctccaggacctccaggagatgtcggcatgaaaggtgaagaagcttac
gtgtgtactgagtgcagctacgttgcaggagtacctggttttcctggttctcctgggcca
cagggccaggtagagaaggaacagcaggtccaaaaggttctccaggctcgccaggagcac
cagggtttccaggagctcaaggacctccagggtttagaggagatcaaggtcgtaaaggat
caaaaggtgagccaggatatgtgtatccagaagggccgaaaggtgagcgaggagatccag
gggccaggggagacagaggaagaaaaggttcaagtggatttctgggaagacctggctcta
aaggatccaagggttctaaagggactggctggttcaaaaggagatagaggactacctgga
ttgcctggcagtcctggtcttcctggagagatggggcttcctggactgccaagatatgga
ccacaaggaataagaggtttcaaaggctctaaaggaatgcctggtccacctgggttacca
ggagaagctggtccgaaaggagagaccactgtgataactccactgccggccctggcagga
cctcaaggaccagatggtttacctggccccccaggagtgcctggtaggattggagcaaga
ggtcagcgaggtgattcaggacatccagggccaacaggagacacgggctttccagggctt
gggtttcctggaaacccaggtccaaaaggagataaaggacttgcaggaagcagagggtca
ccaggttgtgaaggaaagattggagatccaggccgggctggaagtctgggacaaccagga
caaaagggtgacccaggcatggttattcctggagagccaggtagactgggttcaccagga
gctcatggcagtcctggctcaaaaggtgatagaggatttccaggacttccaggcctacca
gggcgtgctggacacgatggtgatgacggcctaagaggagatcgcggctcacctggagtt
cttggagatccaggttttccagggaaacctgctgaatgtcgcattggcctgccaggtttg
cagggtggtcaaggagctacaggcccaccaggaggaagaggtttgcaaggttcaaaagga
gaactaggtcttcctggcttgagtatcccaggaatctatggagagcctggggaacctgga
ttaatcggtctgcagggcagtgcaggattaccgggtcccaaggggcagcctggaaggcca
ggaatctctggtgtgccaggttcaaggggagatccaggtttaatgggccggttaggaatt
cctggagccccaggcatggctggcagaccaggcagcccgggtgtcagaggttcttctggc
ttcccaggactaaagggaagaaaaggatttcttggagcaaagggcgaaccaggtgataaa
ggtttttctggaccatctgagaccttggttggcatcggggataaaggagaacgaggctta
aaaggagttcaaggaagaatgggtctaaaaggagaaaaaggaaatgccggtgtgcacggt
cccccaggtgctgatggggctggaggaatgcctgggctaccaggtgtcaaaggatttatg
ggtcttccagggattcctggaggacaaggattcccaggtgcaccaggaagcaaaggggac
atgggaattccaggtccaaaaggacagaaaggatctccaggctttccaggaccatcaggt
gaccctggcctgccgggctacagtggctttcccggtgacaaaggagatcctgggtacccg
tctcctgggcctccaggagaacctggtccaaaggtacaaagggagatccaggccccccag
gacttttgggcagcaaaggagaaaaaggatcccaaggtcatccaggccgtaaaggaatac
ccggaccacatgggctcagaggagagactggacgtgcaggaatcccagggaagcatggac
ctcctggaggtgttggtgctagaggacagcagggctgccccggacagcagggcatcgctg
gcccccccggggctgttggaaaacctggaagaaatggacttgcaggcgacagaggtgacc
aaggtcggaatggcatgcccggtgccccaggagggaagggagaaccaggagcaccaggga
gaggaatccctggccttcgaggtgctcctggtcgtagagcaaggtggctttggggacttc
tccatgccaaaaacaaaggctgaattctacctctgtggaatcaaaggggacatgggcctg
cctggttttcccgggccaccaggtatgaaaggccatcagggcgaccaagggcccgttgga
cctcctggcctagtgggattccctggacttcagggcacgacgggcatggcaattcctggc
cagaaagggaacagaggtgttgcgggtgctcctggctttccagggcctcctggtcttccc
acacccagcatgaaaggaagcaaaggcgacagaggggcagatggcgtaccagggccaaca
ggccccatcggcgacactggtcctccgggtccaaaaggaatagaaggtcgatcgggttat
cctggtgctagagggcaccctgggtttcttggattcccaggcgtaaaaggagaaaagggt
aatccaggacccaccggaccacaaggtgcagcagggccaaggggaccgaagggccagcat
ggtcttcctggagtccctgggaaaatattctctgtgccaggaagcaagggtcctcctgga
ctgccaggaatcccgggaacaccaggtgatcaaggaattcaggggattcccggactacaa
ggacctaaaggagtaaaaggtctaccaggaagttttggtcatccaggtcaacgaggactg
cctggtccaaaaggagaccggggatttccaggacaaagaggacagcctggactggttggc
tttccaggtctccaagggttacctggatcaccaggtactatgattgctggtccaacaaga
aaaggttttatctttacccggcacagtcagtccacaagcattccttcctgcccgcttggg
actgcgcagatctacgttggctactcgctgctttttgtacagggaaatgaacgagcacac
ggacaagatcttggaacagctggcagctgcttgcagagattcaccaccatgccattctta
ttctgtagcaccaacgacgtgtgcagctttgcttctcgcaatgactactcctactggctg
tccacagcagcagtgattccggcggacatggcacccatttctggcagggcactagagccc
catataagcaggtgtgttgtctgcgagggagctgcaatggtcctggcagttcacagccaa
acaactctagttcctgcgtgtccagaaggctggatgtctctctggaagggcttttctttc
gttatgtacacaagtgccggctcagaagcttctggccaagcactggcgtctcccggatct
tgtctggaagaatttcgagctatcccattcatcgagtgccacggcagggggacgtgcaac
tactactcgaattcctacagtttctggttggcatcattaaatccaagaagaatgttcagg
aggcctctgtcacagactttgaaagctggagaactagaaaatatcatcagccgttgtcag
gtctgcatgaagagaccactctaa

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