Apaloderma vittatum (bar-tailed trogon): 104279284
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Entry
104279284 CDS
T08559
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase CYLD-like
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04217
Necroptosis
avit04622
RIG-I-like receptor signaling pathway
avit04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
104279284
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104279284
04625 C-type lectin receptor signaling pathway
104279284
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
avit01002
]
104279284
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
avit04121
]
104279284
Enzymes [BR:
avit01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104279284
Peptidases and inhibitors [BR:
avit01002
]
Cysteine peptidases
Family C67
104279284
Ubiquitin system [BR:
avit04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104279284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
104279284
NCBI-ProteinID:
XP_009874803
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MNSGLWSQEKASSSYWEXXXXXXXXXXXIFYLLLQECSVIDKQTQKLLKVPKGSIGQFFQ
DRSSVGHSRNIPCKGKKLQIGLKILEQPHAILFVDEKDVIEINEKLAELLLAITNCEERY
SLFKSKSRLTKGIQIDIGSPVRVQLRSGEDKFPGVVRFRGPLMQERSLTGIYFGVELLEE
GRGQGFTDGQYQGKQLFRCDEDCGVFVALDKLELVEDDDNELESDYAAPVDAMQVELPPL
EINSRVSLKIGESIEYGTVIFCDVLPGNESLGYVVGVDMDNPIGNWDGRYNGVQLCSFAS
VESTLLLHINDVIPETVSQDRRPPKLAYASRGGGDKSLFNHSKPKSTGSTSEPGSRSRSE
VFYTLNGSSVDSQPQTKTKPPWYIDEVAEDPAKSLTDSSPGFGHSSPPLQPPLTNSVSTE
NRFHSLPFSLTKASSTNGTIGHSPLSLSVQSVIGDVNTTANQESPSTTGPVGNSHGLEAG
SLAEVKENPPFYGVIRWIGQPPGVNEVLAGLELVNINCSLF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgggcttatggagtcaagaaaaagcaagttcatcctattgggaaannnnnnnn
nnnnnnnnnnnnnnnnnnnnnnntatcttttacttgcttctccaagaatgcagtgtcata
gacaagcagactcaaaagctcttgaaagtgcccaaaggtagcattgggcagttctttcaa
gatcgttcttctgtgggacactccagaaatattccttgtaaaggcaagaaactgcagatt
ggattaaagattctggaacaacctcatgcaatcctgtttgtggatgagaaggatgttata
gaaataaatgaaaaactagctgagttgcttttggccatcactaactgtgaggaaagatat
agtctgtttaagagcaaaagcagattaaccaaaggcatccaaatagatattggctcgcct
gttagagtacagctgagatcaggagaagataaatttcctggagttgtccgcttcagaggg
cccttaatgcaagaacggtccctaacagggatatactttggagtagagttgctggaagaa
ggtcgtggtcagggctttactgatggacagtaccaaggcaagcaacttttcagatgtgat
gaggattgtggggtttttgttgctttggacaaactggagctggtggaagatgatgacaat
gaactggaaagtgactatgcagctccagttgacgcaatgcaggtagaacttcctcctctg
gagatcaactccagggtttctctgaagataggagagagtatagagtatgggacagttata
ttctgtgatgtcttaccaggaaacgaaagtttaggatacgttgttggagtggacatggat
aatcctattggaaactgggatggaagatataatggagtacagctgtgcagttttgcaagt
gttgaaagtacacttcttttgcatatcaatgatgttattccagagactgtgtcacaggac
aggagacctcccaagcttgcttatgcctcaagaggtggtggtgacaaaagcttattcaat
cacagtaagccaaaatctacaggatctacctctgaacctggaagcagaagcagatctgaa
gtcttctacacgttaaatggctcatcagttgattctcagcctcaaacgaaaacaaaaccc
ccatggtatattgatgaagttgctgaagaccctgcgaaatcacttactgattcatcacct
ggatttgggcattcttcaccaccactacaaccacctttaacaaactctgtgtcgacagag
aacagatttcactccctcccctttagcttgacaaaagcatcaagtactaacggtaccatt
gggcatagtcctctctctttgtccgttcagtcagtcattggtgatgtaaatactacggct
aaccaggagagtccatcaacaacaggcccagttgggaactcacatgggcttgaagcaggt
tccttggctgaagttaaagaaaatcctcctttctatggagtaatccgctggattggccag
ccccctggagtaaacgaagtattagctggcctggaactggtaaatataaattgtagcttg
ttttaa
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