Apaloderma vittatum (bar-tailed trogon): 104279402
Help
Entry
104279402 CDS
T08559
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
104279402
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
avit04040
]
104279402
Ion channels [BR:
avit04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
104279402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slowpoke_C
Slo-like_RCK
Motif
Other DBs
NCBI-GeneID:
104279402
NCBI-ProteinID:
XP_009874978
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
AFFYCKACHDDITDPKRIKKCGCKRLIYSKMSIYKRMKLACCFDCGRSERDCSCMSGSVH
SNMDTLERAFPLSSVSVNDCSTSLRAFEDEQPSTLSPKKKQRNGGMRNSPNSSPKLMRHD
PLLIPGNEQIDNMDANVKKYDSTGMFHWCPAKDIEKVILTRSEAAMTVLSGHVVVCIFGD
VKSALIGLRNLVMPLRASNFHYHELKHIVFVGSLEYLRREWETLHNFPKVSILPGTPLSR
ADLRAVNINLCDMCVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGF
TPPGMDRSSPDNSPVHGLLRQPSITTGANIPIITELVNDSNVQFLDQDDDDDPDTELYLT
QPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEENALRGGYSTP
QTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSTPS
QCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSYSSSKKSSSVHSI
PSTANRPNRTKTRDSREKQNATRMNRMGQEKKWFTDEPDNAYPRNIQIKPMSTHMANQIN
QYKSTSSLIPPIREVEDEC
NT seq
1861 nt
NT seq
+upstream
nt +downstream
nt
ggcatttttttactgcaaggcgtgtcatgatgacatcacggatcccaaaaggataaaaaa
atgtggctgcaaacggctgatctattccaagatgtccatctacaagagaatgaaactggc
atgttgttttgattgcggacgctctgagcgtgactgctcttgcatgtcaggcagtgtaca
tagtaacatggacacccttgagagagccttcccactttcttctgtctctgttaatgattg
ctccaccagtttacgtgcctttgaagatgagcagccgtcgacactatcacccaaaaaaaa
gcagcgaaacggaggcatgcgaaattcacccaactcctcacccaaactgatgaggcatga
ccccttgttaattcctggcaatgagcagattgacaatatggatgccaatgtgaaaaaata
cgactctacagggatgtttcattggtgtccagccaaggacattgaaaaggtcattttgac
tcgaagtgaagcagcgatgacagttttaagtgggcatgtagtcgtttgcatatttgggga
tgttaaatctgctttgattggattaagaaatttagtgatgccattacgagccagcaactt
tcactaccatgaactcaagcacattgtgtttgtgggttcacttgaatacctgagaaggga
atgggagacactgcataacttccccaaggtttcaatcttgcctggtacaccattaagtcg
ggctgatttaagggctgtcaacatcaacctctgcgacatgtgcgttatcctgtcagccaa
tcagaataatattgatgatgcttcgctgcaggacaaggaatgcatcttggcgtcactcaa
catcaaatctatgcagtttgatgacagcattggggtcttgcaggctaattcccaaggctt
tacaccccctgggatggataggtcatccccagacaacagtccggtccatggcctgttacg
tcaaccctccattacaacaggagccaacatccctattataacagagctagtaaatgattc
aaatgttcagttcttggaccaagatgatgatgatgatccagacacagaattgtatctcac
gcagccctttgcatgtggaaccgcgtttgctgtcagtgtgctggactctctcatgagcgc
aacatacttcaatgacaatatcctcacactgatacggacattggtaacaggaggagccac
accagagctggaagcactgattgctgaggaaaatgcgttgagaggaggttacagcacgcc
ccagacacttgcaaacagggacaggtgtcgagttgctcagttggctctgtatgatgggcc
gtttgcagacctaggggatggaggttgttacggagatctattttgtaaagcacttaaaac
atacaatatgctttgctttggaatttatcgattaagggatgcacatctaagtactcccag
ccaatgcactaaacgttatgtcatcacaaacccaccgtatgaatttgagcttgtgccgac
agacttgattttctgtctgatgcaatttgaccacaacgctggccagtcccgggccagtct
ttctcactcctcccattcctcctattcttccagcaagaagagctcatcagttcactccat
cccatcaacagcaaaccgaccgaaccgcactaagaccagggattcccgggaaaaacagaa
tgcaacaaggatgaatagaatgggccaagaaaagaaatggtttacagatgagccggataa
tgcctatcccagaaacattcaaatcaagcctatgagcactcatatggccaatcagatcaa
tcaatataaatcgacaagcagcttgataccaccaatcagagaagttgaagatgaatgttg
a
DBGET
integrated database retrieval system
