Apaloderma vittatum (bar-tailed trogon): 104279811
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Entry
104279811 CDS
T08559
Name
(RefSeq) LOW QUALITY PROTEIN: netrin receptor DCC-like
KO
K06765
deleted in colorectal carcinoma
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104279811
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
avit04515
]
104279811
Cell adhesion molecules [BR:
avit04515
]
Immunoglobulin superfamily
DCC/UNC5 family
104279811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Neogenin_C
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
I-set
Fn3_VIN3
Ig_Rha78A_N
Ig_3
ig
Fn3_R-PTP-O
Interfer-bind
Ig_2
SusE
Protocadherin
Arylsulfotran_N
Fn3_SaeA_3rd
FAM176
EphA2_TM
V-set
Motif
Other DBs
NCBI-GeneID:
104279811
NCBI-ProteinID:
XP_009875528
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
PPWFLIRPSNLYAYESMDIEFECAVSGKPLPTVAWIKNGEVVIPSDYFQIVGGSNLRILG
LVKSDEGFYQCVAENEAGNAQASAQLIIPEPAVPSASVLPSAPRDVVPVLVSSRFVRLSW
RPPAEARGSVQTYTVFFARDGVNRERAVNTSQSGTLQLTVGNLKPEETYTFRVVAYNEWG
PGESSQPVKVATQPELQVPGPVENFRAVSTSPTSILVSWDPPAYANGPVQGYRLFCTETA
TGREQNVEVDGLSYRLEGLKKFTEYTLRFLAYNRYGPGVSTEDVTVTTLSDVPSAMPQNV
SLEVVNSRSIKVSWLPPPPGTQNGFITGYKIRHRKTTRRGEIETLEPNNLWYLFTGLEKG
SQYSFQVAAMTVNGTGPPSDWYTAETPENDLDESQVPDQPSSLHVRPLTTSIVMSWTPPL
NPNIVVRGYIIGYGVGSPYAETVRVDSKQRYYSIESLEPSSHYVISLKAFNNAGEGVPLY
ESATTRSMTDPIDPLEVDFYPLLDDFPTSVPDISTPMLPPVGVQAVALTHDAVRVIWADN
SVPKNQKTAEVRFYTVRWRTSYSTSAKYKSADTTALSHTVMGLKPNTMYEFSVMVTKGRR
SSTWSMTAHATTYEAAPTSAPKDLTVITREGKPRAVVVSWQPPLEANGKITAYILFYTLD
KNAPIDDWIMESISGDRLTHQIVDLNLDTVYYFRIQARNAKGVGPLSDPIFFRTLKVEHP
DKMANDQGRHGDGSYWPGGTHQXDRSSLNEPPIGQMHPPHGSVTPQKNNNLLVVIVVTVG
VITVVAVAVVAVVCTRRSSAQQRKKRATHSAGKRKGSQKDLRPPDLWIHHEEMEMKNIEK
PTGSEAAAGRDSPMQSCQDISPVSHSQSETQLGSKSTPQPGPETEEVGNSMSTLERSLAA
RRATRAKLMIPMDSQPNNPPVVSAIPVPTLESAQYPGILPSPTCGYPHPQFTLRPVPFPT
LSVDRTFGAARTVPEGPAPQQPPL
NT seq
2954 nt
NT seq
+upstream
nt +downstream
nt
ttccgccctggtttttaatccgcccctcaaacctttacgcctacgagagcatggacatcg
agttcgaatgtgccgtctccgggaagccccttcctacggtggcgtggatcaagaacggag
aagtcgtcattcccagcgattattttcagatcgtgggtggcagcaacttacggattctgg
gcttggtaaagtcagatgaaggtttttatcagtgcgtagccgaaaacgaagctggcaacg
cccaggccagcgcacagctaatcatcccggagcccgctgtcccaagtgccagtgtcctcc
cctctgccccccgagatgtggtccctgtcttggtctccagccgatttgtccggctcagct
ggcgcccgcccgcggaagcccgaggcagcgtccagacgtacacggtcttcttcgccaggg
atggagtcaacagggaacgggcggtcaacacctcgcaatccgggacgcttcaactcaccg
tgggcaacctgaaaccggaggagacttacaccttccgcgtggtggcttacaacgagtggg
gaccgggagagagctcgcagcccgtcaaggtggccacgcagccggagctgcaagttcccg
ggccggtggaaaacttccgggctgtgtcgacctcgcctacgtcaatcctcgtgtcctggg
atcccccggcctacgccaacggccccgttcagggctacaggctcttctgtacggagacgg
cgactgggagagagcagaacgtggaagtggatgggctctcgtaccgcctggagggcctca
aaaaattcaccgagtacaccctgcgcttcctcgcctacaaccgctacggccccggcgtct
ccaccgaggacgtgacggtcacgacgctttcagacgtgcccagcgcgatgcctcagaacg
tctccttggaagtggtgaactccaggagcatcaaagttagctggttacccccgccgccag
gtactcaaaatggatttattacgggctataaaatccgccaccgaaagacaacccgcaggg
gtgagattgaaacgctggagcccaacaacctctggtacttgttcacaggacttgagaaag
gaagccagtacagtttccaggtggctgccatgacggtgaacgggacgggacccccctcgg
attggtacacggcggaaacccctgagaacgatctcgatgaatctcaggttcctgaccagc
cgagctcgcttcacgtcaggcccttgacgacgagcatcgtcatgagctggacgccgccgc
tgaaccccaacatcgtcgtccgcgggtacatcatcggctacggcgtgggcagcccctacg
ccgagaccgtgcgggtggacagcaagcagcgctattattccatcgaaagtctggagccga
gctcccactacgtgatttccctgaaggcgttcaacaacgcgggcgagggggtgcccctgt
atgagagcgcgaccacccgctccatgacagaccccattgatccattagaagttgattttt
atcctttgcttgatgatttccctacctcagtcccagatatctccacccccatgctcccac
cagtaggtgtccaggctgtcgcacttacgcacgacgcggtgagggtcatctgggcagaca
actctgtcccaaaaaaccaaaagactgcggaggttcgcttctacacagtccgatggagaa
cgagctattcgacgagtgctaagtacaagtcggcagatacgacggcgctgagccacacgg
tgatggggctgaagccaaacaccatgtacgagttctccgtcatggtgaccaagggccgac
ggtccagcacgtggagcatgaccgcccacgccaccacctacgaagcggctccaacttctg
ctcccaaggatttgacagtgattacgcgggaagggaagccccgggctgtcgtcgtcagct
ggcagccgcccttggaagccaatggaaaaatcactgcttacatcctcttctacactttgg
acaagaacgcgcccatcgacgactggatcatggagtcgatcagcggcgaccggctcaccc
accagatcgtggacctcaacctcgacaccgtttattacttccgaatccaagctcgcaacg
ccaaaggagtgggccccctctccgatcccattttcttccgcacgctgaaagtcgagcacc
ccgacaaaatggccaacgaccaaggtcgccacggggacggctcgtactggccggggggca
cccaccaanacgacaggagcagcctcaacgagccccccatcgggcagatgcaccctcccc
acggcagcgtgacgccgcagaagaacaacaacctcctcgtcgtcatcgtcgtcaccgtcg
gcgtcatcacggtggtggccgtggccgtggtggccgtcgtgtgcacccggcgctcctcgg
cgcagcagaggaagaaacgcgcgacccacagcgccgggaaaaggaagggcagccagaagg
acctgagacccccggatctgtggatccaccacgaggagatggaaatgaagaatattgaga
agccgacgggctcggaggcggcggcggggagggactcgcccatgcagagctgccaggaca
tcagccccgtgagccacagccagtcggaaacgcagctgggaagcaagagcaccccgcaac
ctggtccggagacggaagaagttggaaacagcatgtccacgctggaacgctcgctggccg
cccgccgagccacccgggccaagctcatgatccccatggattcgcaacccaacaacccgc
ctgtggtcagcgccattccggtgccgacgctcgaaagcgcccagtaccccgggatcctgc
cgtccccgacctgcgggtacccccacccgcagttcaccctccggcccgtgcccttcccga
cgctctccgtggacaggacctttggagctgcgagaactgtccccgaaggcccggccccgc
agcagccgcccttg
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