Apaloderma vittatum (bar-tailed trogon): 104279845
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Entry
104279845 CDS
T08559
Name
(RefSeq) LOW QUALITY PROTEIN: aggrecan core protein-like
KO
K06792
aggrecan 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
avit00535
]
104279845
00536 Glycosaminoglycan binding proteins [BR:
avit00536
]
104279845
04091 Lectins [BR:
avit04091
]
104279845
Proteoglycans [BR:
avit00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
104279845
Glycosaminoglycan binding proteins [BR:
avit00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
104279845
Lectins [BR:
avit04091
]
C-Type lectins
Lecticans
104279845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
CTD
Sushi
V-set
EGF
hEGF
EGF_CA
EGF_3
Motif
Other DBs
NCBI-GeneID:
104279845
NCBI-ProteinID:
XP_009875580
LinkDB
All DBs
Position
Unknown
AA seq
2053 aa
AA seq
DB search
MTTLLLVFVCLRVITAADSVELSDSSDGLEVKIPEQSPLRVVLGSSLNIPCYFNIPDEQD
TSALLTPRIKWSKLSNGTEVVLLVATGGKIRLNSEYREAISLPNYPAIPTDATLEIKALR
SNHTGIYRCEVMYGIEDRQDTIEVLVKGVVFHYRAISTRYTLNFEKAKQACIQNSAVIAT
PEQLQAAYEDGYEQCDAGWLADQTVRYPIHWPRERCYGDKDEFPGVRTYGVREPDETYDV
YCYAEQMQGKVFYATDAEKFTFQEAFDKCRSLGARLATTGELYLAWKEGMDMCSAGWLAD
RSVRYPISRARPNCGGNLVGVRTVYLYINQTGYPHPDSRYDAICYSGDDVETLVPGQFID
ETGTELGSGFTVQTVTQTDMEIPLPRNATEEEARGSIATLEPIEITPTATELYEGFTVLP
DLFGTGVTVETAAPEEENVTRGDVTQVWVVPEDVTTITLGTAITTKTSEVSSVEEVTGAT
ATPELESPISPTGVVFHYRAATSRYAFSFVQAQRACLENHAVIATPEQLQAAYEAGFDQC
DAGWLRDQTVRYPIVNPRSNCVGDKESSPGVRSYGMRPASETYDVYCYIDRLKGEVFFAT
QPEQFTLPEAQRYCESQNATLASVGQLHAAWKQGLDRCYAGWLADGSLRYPIVSPRPACG
GDAPGVRTVYQHRNQTGFPHPLSRHHAFCFRALPPVEEEGVTSFLEEEVLATQVIPGVEG
VPSGEEVTVETELATQPENQTAWGTGVFPTDVSLLSVSPSDFPPATITPEETSTNASISE
ASEDVIQSGEHQISGESSTSGWASGVPDTSGEPASGVFELSGEHSGAGESGLPSVDLHTS
GFLPGESGLPSGDLSGMPSGAVDISGLTSGEEEISVSPSRIPEISGMPSGVESSGLPSGF
SGEISGTELVSGVSSGEESGLASGFPTVSLVDTTLVEVVTTAPERREEGKGSIGVSGEGD
LSGFPSAELDSSGGAQGLPSGAELSGEPSGGSELSGETSGVSEISRELSGEASGVPELSG
LPSGLDVSGEPSGTHDVSGLVDLSGLTSAIDGSSEASGITFVDTSLEDVTTTSSTTGAEA
KEILEISGLPSGGGDASGMVSWSLDISGEPSGHVDFGGSVSGVPEMSGHPSGVIDSSGEV
SGVDVTSGLLSGEESGLTSGFPTVSLVDTTLMEVVTQTSVAQEVGEGPSGMIEISGFPSG
DRGLSGEGSGAMETSGFPSGTGDFSGEPSGIPYISGDVSGATDQSSAVTDISGETSGLPE
VTLLTSDLVEAVTRPTVSQELGGETAVTFXXXXXXXXXASGELSGETSALPESGTETSTA
YEISGETSAFPETSIETSTIQEISGETSAFPEFSIETSTIQEISGETSAFPEFSIETSTF
QELSGETSAFSESSAETSTIQEISGETSAFPEIRIESSTSQDISGETSAFPEIRIETFTS
QEARGETSGYPEISIETSTVHETSGETSAFPEISIETSTVPETIHEISGESSAFPEIRIE
TSTSQEARGETSAFPEISIETSTVHEISGETSAFPEIRIETSTVREISGETSAYPEIRIE
ASTSQEAQGETSVFPEISIETSTVHEISGETSVFPEISIETSTNHEARGETSAYPEISIE
TSTVQEVSGETSAFSEIRIETSTSQEAQGETFAFPETSIEISTTHETSREASTLPAANIE
TAATSLASGEPSGAPQEKNIPDATSGAVTHSVAGISGETSVPDTLISTSAPDVEPMQGPR
NPEEAQLEIEPSPPAVSGQEMETAVVLDNPHLLATATAALPQVSQEAIDALGPTTEDTDE
CHSSPCLNGATCVDGIDSFKCLCLPSYGGDLCEIDLENCEEGWTKFQGHCYRHFEERETW
MDAESKCRQHQAHLSSIITPEEQEFVNSHAQDYQWIGLSDRAVENDFRWSDGHSLQFENW
RPNQPDNFFAAGEDCVVMIWHEQGEWNDVPCNYHLPFTCKKGTVACRDPPVVENAKTFGR
KKDRYEINSLVRYQCNQGYIQRHVPTIRCQPNGQWEEPRISCINPSNYQRRLYKRSPRSR
SRPSGRAVHRPTH
NT seq
6162 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactattagtgtttgtgtgtttgcgagtcatcacagcagccgactctgtg
gagctctcagacagtagtgatggcctggaagtgaagatacctgagcagtctcctctgcgt
gttgtcctgggaagctccctgaacattccatgttacttcaacatcccggatgaacaggac
accagtgctctgctgaccccacggatcaaatggagcaagctctcgaacgggactgaggtt
gtcttgctagtggccaccggtgggaaaatccggctcaactccgagtatagggaggcaatc
tctttgcccaactaccctgccatccccactgatgccactttggaaattaaggcactgaga
tccaaccacactgggatttatcgctgtgaggtgatgtacgggatcgaggacagacaagac
accatagaggtcctagtgaaaggcgttgtcttccactacagagcaatctccacaaggtac
accttgaactttgagaaagcaaagcaggcctgtatccagaacagcgctgtcattgctact
cccgagcagctgcaagctgcctacgaggatggatacgagcagtgtgatgctggctggctg
gctgatcagactgtcaggtaccccatccactggccccgggaacgatgttacggcgacaag
gatgaatttccaggagtgaggacctatggtgtccgtgagccggatgaaacttatgatgtt
tactgctacgcagagcaaatgcaaggcaaagtcttctatgccaccgacgccgagaagttc
accttccaagaagcttttgacaaatgccgcagcttgggagcccgtttggccaccacagga
gagctgtacttggcctggaaggagggcatggacatgtgcagtgcgggctggctggctgac
cgcagcgtccgctaccccatctccagagcacggcccaactgcggaggaaacttggtgggc
gtgaggacagtgtacctgtacatcaaccagacagggtaccctcaccctgactctcgctac
gatgccatctgctacagcggggatgatgtcgagactctggtcccagggcagttcatcgat
gagactggaactgagctgggcagtggtttcactgtccagactgtcacccagaccgacatg
gagatacctctgccacgcaacgccacggaggaggaggcccgcggcagcatcgccaccctg
gaacccattgagatcacacccacggccaccgagctctacgagggcttcaccgtcctgccg
gatctctttggcaccggtgtcacagtagagacggctgccccggaggaggagaacgtgact
agaggggatgtcacacaggtgtgggttgtacctgaagacgtcaccaccataacattaggc
actgccatcaccaccaaaacgtcagaggtgagctcagtggaagaggtcaccggggcgact
gccacaccagaactagagtctcccatctcccccacaggtgtggtgtttcactaccgtgcc
gccaccagcagatatgccttctccttcgtccaagctcagcgggcctgcctggagaaccat
gcagttattgcaacccccgaacagctccaggctgcctacgaggctggctttgaccagtgc
gatgccggctggctgcgggaccagacagtcaggtatcctattgtgaatccccgaagtaac
tgcgtaggagacaaagagagctctccaggcgtgcggtcatacggcatgcgcccggcctcg
gagacctatgatgtgtactgctacattgacagactcaagggtgaagtgttctttgcaacc
cagccagagcagttcaccttgccagaagctcagcggtactgcgaaagccaaaacgccacg
ttggcttctgttggccaactccacgctgcctggaagcaaggcttggacagatgctacgct
ggctggttggccgatggcagcctccgctaccccatcgtcagcccccgtcccgcctgcgga
ggggacgcacctggcgtgagaaccgtctaccagcatcgcaaccagacaggctttccccac
ccactgtcccggcaccacgccttctgcttcagagctctgccacctgtggaggaggagggg
gtcacctcattccttgaagaagaagtgctggcaactcaagtgatccctggagtggagggt
gtaccctccggggaagaggtgaccgtggagacagagcttgccactcaacctgagaatcag
acagcctgggggacaggggtcttcccaactgatgtgtcactgctctcagtgagtccatct
gattttcctccagctaccataacaccagaagaaacaagtaccaatgcttccatcagtgaa
gcatcggaggatgtgattcaatctggagaacatcaaatcagtggtgaatcttcaacatct
gggtgggcatctggagtcccggatacaagtggagaaccagcgtctggagtctttgaactt
agtggagaacactcaggggctggagaaagtggattaccatcagtagacctgcataccagt
ggctttctacctggagaaagtgggcttccctcgggggacctgagcggcatgccttctggc
gctgttgacatcagtggcttaacttctggggaggaagagatatcagtgtctccttcgagg
ataccagaaattagtgggatgccatctggagtggaaagcagtgggctgccttctggattt
agcggagaaatctctggcactgagctagtcagtggcgtgtcatctggagaggaaagtgga
ctcgcctctggttttcctaccgtctctcttgtggataccacactggtagaagttgtgacg
acagcgccagaacggcgagaggagggtaaaggatccatcggagtcagcggtgaaggagat
ctttcagggttcccatctgctgagctggacagcagtggtggagcccaaggattaccctca
ggagctgagctcagcggggagccctccggaggttctgagctcagtggggagacttctggg
gtgtctgagatcagcagggagctcagtggggaggcctctggagtgcctgagctcagcggg
ttgccctcaggactggatgtcagcggagaaccatctggaacacatgacgtcagtggcctg
gtggatctgagtggccttacttctgctatcgatggaagtagtgaggcctcgggtattacc
tttgtagataccagtttggaggacgtgacaacaacctcctcaactacaggagcagaagca
aaagagattttggaaatcagtggattgccttcaggaggtggagatgcatcaggcatggta
tcttggagtttagacatcagtggtgagccttctgggcatgtagactttggtgggagtgtt
tctggagtgcctgagatgagcggacatccaagcggagtgattgacagcagtggagaagtc
tctggagttgatgtcaccagtggcctcctgtctggagaggaaagtggactcacctctggc
tttcccacagtctctcttgtggatactactttgatggaagttgtaacacagacatcagtt
gcacaggaggtgggagaagggccatctgggatgatagaaatcagtggatttccttcagga
gacagaggactatctggagaagggtctggagccatggaaaccagtgggtttccttcaggg
acaggagacttcagtggagagccatctgggattccgtacatcagtggagatgtttctgga
gccacagatcaatcttcagcagtgactgatattagtggggaaacctcagggcttccagaa
gtcactttactcacttctgatttagtagaagctgtgacaagaccaacagtatcacaggaa
ctgggtggggaaacagctgtcacatttnncnnnnnnnnnnnnnnnnnnnnnnntgcatct
ggtgaactaagtggggaaacatccgcattgccagaaagtggtacagaaacatcaacagct
tatgaaatcagtggtgaaacatctgcatttcctgaaactagtatagaaacatcgacaatt
caagaaatcagtggggaaacatctgcttttcctgaatttagcatagaaacgtcaacaatt
caagaaatcagtggtgaaacatctgcatttcctgaattcagcatagaaacatccacattt
caagaattaagtggggaaacctctgcgttttctgaaagtagtgcagaaacatccacaata
caagaaatcagtggggaaacatctgcatttcctgaaattagaatagaatcatccacaagt
caagacatcagtggggaaacatctgcatttcctgaaattagaatagaaacattcacaagt
caagaagcccggggtgaaacatctggctatcctgaaattagcatagaaacttcaacagtc
catgaaaccagtggagaaacatctgcctttccagaaattagcatagaaacttcaacagtc
cctgaaaccattcatgaaatcagtggagaaagttctgcatttcctgaaattagaatagaa
acatccacaagtcaagaagcccggggtgaaacgtctgcatttcccgaaatcagcatagaa
acttcaacggtccacgaaatcagtggggaaacctctgcctttcctgaaattcgaatagaa
acttcaactgtccgtgaaatcagtggggaaacctctgcatatcctgaaattagaatagaa
gcatccacaagtcaagaagcccagggtgaaacatccgtattccctgagattagcatagaa
acttctacagtccatgaaatcagtggggaaacatctgtattccctgagattagcatagaa
acttcaacaaatcatgaagccaggggtgaaacatctgcctatcctgaaattagcatagaa
acatccacagttcaggaagtaagtggagaaacctctgcattttctgaaattagaatagaa
acatccacaagtcaagaagcccagggtgaaacatttgcgtttcctgagactagcatagaa
atatccacaacccacgaaaccagcagagaagcatccacattgcctgctgctaacatcgaa
acagctgccacatctttggccagcggtgagccctctggtgctccccaggagaagaacatt
cctgacgcaacatctggagctgtgacacactcagtcgcaggcatttcaggggaaacctct
gtcccagacactctaattagtaccagtgctccagatgttgaaccaatgcagggacctagg
aaccctgaagaggctcagctcgaaatagagccctctcctcccgctgtgtcaggacaggag
atggagacagctgttgttctagacaacccacatctgctggccactgctactgctgccctg
cctcaagtgtcacaagaagcaatagacgcattaggacccactacagaagacactgatgag
tgccactcaagcccctgtctgaatggagctacctgcgttgatggcatcgactctttcaaa
tgcttatgccttcccagctacggaggggacctgtgtgagatcgacctggaaaactgtgag
gaaggctggaccaagttccagggccactgctacaggcactttgaagagagggagacttgg
atggatgcggagtccaaatgccgacaacatcaagcccacctgagcagtatcatcacccca
gaggagcaagaatttgtgaacagccatgcacaggactaccagtggattggtctcagtgac
agagctgtggagaacgactttcgctggtccgatgggcattctctgcaattcgagaactgg
cggcccaatcaacccgacaatttctttgcggcgggtgaggactgtgttgtgatgatctgg
cacgagcaaggcgaatggaacgatgttccctgcaactatcacctccctttcacctgcaag
aaaggaacagtggcctgcagagatccccccgtggtggagaacgccaagaccttcggtcgg
aagaaggaccgttacgaaataaactccttggtgcggtaccagtgcaaccaaggctacatc
cagcgccacgtgcccacaattcggtgccagcccaatgggcagtgggaggaaccgcggata
tcctgcataaacccctccaactaccagcgcaggctatataagaggagccccaggagccgg
tcgagacccagcggcagagccgtgcacagacccacccattag
DBGET
integrated database retrieval system
