Apaloderma vittatum (bar-tailed trogon): 104279855
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Entry
104279855 CDS
T08559
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104279855 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avit03400
]
104279855 (RAD54B)
DNA repair and recombination proteins [BR:
avit03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104279855 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
TusA
AAA_22
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
104279855
NCBI-ProteinID:
XP_009875591
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MEGKDIGRGTGYKSKELDSLEEGQTLMVGGKEIEVMGVISADDFSSGRCFQAGIGTQNTV
PTASSQSNMKPFSKPFKNVCQPSNKENILKDSQSYKPRHDPNAPNSLVMPKPNASHQWLF
NKAGLPIVDVVVDPYIANNLRPHQKEGIIFLYECVMGMRVDGRFGAILADEMGLGKTLQC
IALVWTLLRQGVYGAKPLLKRALIVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKIEE
FINSPLYSVMIISYEMLLRCLDQIQAIDFNLLICDEGHRLKNSSIKTTTALASLSCERRI
ILTGTPIQNDLQEFYALIEFVNPGILGSLCTYRKIYEEPIVRSREPSATKEEKDLGEKRA
AELTRLTGLFILRRTQEVINQFLPPKKESIIFCRPTALQLELYRKLLSSQVIRSCLQGRL
ENSPHLICIGALKKLCNHPCLLFKAIKEKSCDPTSDEHDEPGLYEGLIDIFPQDYTLDTF
SESNSGKLQVLVKLLGAIRELNSSERVVLVSNYTQTLNILQETCKRYGYSYTRLDGHTPV
SQRQQIVDTFNSKFSPAFIFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWR
DGQKRTVYIYRLLTTGSIEEKIYQRQISKQDLSGAVVDLSKTSEHIHFSIEELRNLFTLH
EDSNCVTHDLLECDCMGKKDHQDPSSASLSRICQLGQNHMKPNSKKPLSMSQLMQWKHFS
GQHQTLADPFLERIKENVSFIFQNVTSPTPPI
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcaaagatattggaagaggtactggatataaatctaaagagctcgacagtctt
gaggaaggtcaaacactcatggttggaggaaaagaaatcgaagtgatgggtgtaatttca
gcagatgacttcagcagtggcaggtgttttcaggctggaatagggactcagaacacagtc
ccaactgcttcatcccaatctaatatgaaaccattctctaaaccattcaaaaatgtctgt
caacccagtaataaagagaatattctcaaagattctcaaagctacaaacctcgccacgat
ccaaatgctccaaattctctagttatgccaaaaccaaatgcaagtcatcagtggctgttc
aataaggctggtttacctattgtggatgtagttgtggatccttatatcgcaaataatctc
agaccgcatcagaaagaaggaattatatttctgtacgaatgtgtgatgggaatgagagtt
gatggcagatttggagctattcttgctgatgaaatgggcttaggaaaaacactgcagtgc
atcgcacttgtctggactcttctgcgtcagggggtctatggcgccaaacctctactaaag
cgagcactaattgtcacccctgggagtctggtaaaaaactggaaaaaagaatttcagaaa
tggttgggaagtgaaaggatcaaagtctttacagttgatcaggaccataaaatagaagaa
ttcatcaattctccactttattcagttatgataatcagttacgagatgctgctgcgatgt
ttagatcaaatacaggctatagattttaacctcctgatctgtgatgaaggacatcgtctg
aaaaatagttctattaagacaactacagccctcgctagtctgtcttgcgagagaagaatt
atccttactggtactccaatccaaaatgacttgcaagaattttatgcattaatagagttt
gtgaatccaggaatacttggttctttatgcacatatagaaagatatatgaagaaccaatt
gtcaggtctagagaaccttcagcaacaaaggaggaaaaagatttaggagaaaaaagagca
gcagaactcacacgcctcactggactctttattcttaggagaacacaggaggttataaac
caatttctgccccccaagaaggagagcataatcttctgccgaccaacagcgctgcaactt
gaattgtatcgaaaactgcttagttctcaagttattagatcctgtctacaaggcaggctg
gaaaacagtcctcacctaatatgcataggagctttgaaaaaactttgcaatcatccatgt
cttctcttcaaagctatcaaggaaaaaagctgtgatcctacatctgatgaacatgatgag
cccggactctacgaaggtctaatagacatctttccacaagattatactttggacactttc
tctgaaagcaattcaggaaaattgcaggtgctggtgaagttgttaggagcaatccgtgag
cttaactcttctgaaagggtcgtgctggtatccaattacactcagacattaaacatatta
caagagacttgcaaacgttatggatactcttacactagacttgatggacatactcctgtc
tcccagagacaacagattgttgatacttttaatagtaaattcagtccagcttttatcttt
ttgctgagttcaaaggctggtggagtaggactgaatctggtcggagcatctcatttgatc
ctgtatgatatcgactggaatccagctacggatattcaggcaatggctagagtgtggaga
gacggtcagaaacgtactgtctatatctacagactgctaaccacaggctcaatagaagaa
aagatttatcaaagacagatcagcaaacaagacctttctggggcagttgtggacctttct
aagacatccgaacacatccatttttctattgaggagcttagaaatctctttactcttcat
gaagattccaactgtgttacccatgacttgcttgagtgcgactgtatgggaaagaaagac
catcaagatccttcctcggcttctctgtctagaatttgccagcttggacagaaccatatg
aagcctaattcaaagaaaccactttccatgtcgcagttgatgcagtggaaacatttttct
gggcagcatcagactcttgctgatcctttccttgaaaggataaaagagaatgtttctttc
attttccagaatgtaaccagtccaactccccccatctaa
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