KEGG   Apaloderma vittatum (bar-tailed trogon): 104280059
Entry
104280059         CDS       T08559                                 
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:avit00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104280059 (PDLIM1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:avit04990]
    104280059 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:avit04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   104280059 (PDLIM1)
SSDB
Motif
Pfam: DUF4749 LIM T7SS_ESX_EspC
Other DBs
NCBI-GeneID: 104280059
NCBI-ProteinID: XP_009875895
LinkDB
Position
Unknown
AA seq 267 aa
MTHLEAQNKIKGCTDELTLTVSRTEAKVWSPLVNEEGKTHPYKMNLASQPQEIRHIGSAH
NRSAVPFTAATASAPRVITAQYNNPAGLYSSENIQTFNSAVESKTSLGAQEPAKPLDQQN
QPPGGIVIDRQSEVYKMLQENQESNEPPRQSASFLVLQEILESEEKGDPTKPSGFRSVKA
PTTKVASSIGNAQKLPMCDKCGSGIVGVFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVE
DQIYCEKHARERVIPPEGYEVVTVFPK
NT seq 804 nt   +upstreamnt  +downstreamnt
atgacgcaccttgaggcacagaacaaaatcaagggttgcacagatgaactaactctgacg
gtcagcagaacagaggcaaaagtctggtcaccgctggtaaatgaggagggaaagacgcat
ccttataagatgaatctggcctctcagccacaggaaataaggcatataggaagtgcacac
aaccggagcgcggtgcccttcactgctgccacggcttctgcccccagagtgatcactgct
cagtacaacaacccagcaggcctctactcctcagagaacatccagaccttcaacagtgcg
gtggagtcaaagacgtcacttggggctcaggagcctgccaagcctttagatcagcagaac
cagcctccaggtggcattgtcatagacagacaatctgaggtttacaagatgctccaggag
aatcaagagtcaaatgagccacccaggcagtctgcttcattccttgtgttgcaagagatt
ttggagtcagaagagaaaggagaccctaccaaaccatctggatttaggagcgtcaaagct
cccaccacaaaggtggcctcatcgattggaaatgcccagaagctgcccatgtgtgacaag
tgtggatctggcattgtaggggtgtttgtgaagatccgggacaagcagcgtcaccccgag
tgctacgtgtgcagtgactgcggcaccaacctcaagcagaaaggacacttctttgtggaa
gaccaaatctactgcgagaagcatgcccgggagcgggtgattcccccggaaggctatgag
gtggtcaccgtcttcccgaagtaa

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