Apaloderma vittatum (bar-tailed trogon): 104280107
Help
Entry
104280107 CDS
T08559
Symbol
PDZD2
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing protein 2
KO
K24058
PDZ domain-containing protein 2
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
avit04990
]
104280107 (PDZD2)
Domain-containing proteins not elsewhere classified [BR:
avit04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
104280107 (PDZD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
104280107
NCBI-ProteinID:
XP_009875963
LinkDB
All DBs
Position
Unknown
AA seq
2042 aa
AA seq
DB search
YLAEQCWNGGFVYLIMLRRIKRKAPLPPSNGNNSNSCDSKAKPSPEPGDRASQNGKRTRK
FGVITRTPGSKDSKEKPVSEHGNGHCTPMEVEVAPPDTSEAESNGEEQLRDTGEQYRCQL
SDSGVPDLGDQSVQREGCRIWKMHILKGTDGLGIQITGGRGSKRSPHSIIVTHVEEGGSA
HRDGRLTVGDELLMINGQSLVGLSHQDAVALLRSAAGLVQLVVASKESAEGDFLKYPTTS
LPDLLSTCSVQDSVSCTDNKENEEPEEEDVKGVNMSPEKLFAVMETEKSHDPVCAEVSKG
NNQNPTLGSGILKYRSRSQGAGSRLESVGEDDELTVENGESNYEIAVKYSRGGRKHSLPQ
QLESAGARQDYHIVKKSTRSFSAAQVESPWRLTQPSIISNIVLMKGQGKGLGFSIVGGQD
SARGRMGIFVKTIFPNGAAAADGRLKEGDEILEVNGESLQGLTHQEAIQRFKQLKKGVVT
LTVRTRLRSPSLTPCVTPTLLSRSSSPSSSTSGGMMVPGPDEGDGCSSSRKGPGPKDRII
MDVTLNKEPGVGLGIGACCLTLENSSPGIYIHSLAPGSVAKMDGRLSRGDQILEADSVSL
RHAALSEAYAILSECGPGPVSLIISRHPNPKVSEQEMDEAIARTTHRESKDASSSHVTGA
VQKSPSPSVKTKQVETSSPLSWTMKRFLEPASRGSVSSEAELSQYFSHDGTTQLPFSDAV
TGSCSEEHLRQKNRNSLLDDGSLLPATREAGVTKANGLASPSSGRSSGLHNKHVESVRPG
ILSDSPKSGRSPFHRQRRVVFYDGDVSDDDESSHLQRSQRAKSQEDTSIVITTSSVEIDD
ESQDSESPRYSSTETSSPVFSNSVESADRTLEQIDSPFFPIIAFDYSSVPEVRLASLSLK
ELREAQLESKRSPKLEHRAVTRVKSMMSTECRSLQRQKTEEHGSYNKPVARTLRHSKKCE
APDGAGQVQGEIVTLVRNEHESFGLDLEIQAMPLKVVVTGLRPGGAAEMGSMGKMAVGDE
ITTINSIPVSKMTYEEICLLMQCLPTSVTLEIQKAAPAVSRFTNFILTPGGDSQNPADAN
SILATEEELSAEKREGAGLQNAGSSGALERTTLPPDATSKDVQRGTMRSSRTEDNSAIPV
TDIDDLLSQMSAPESRASRTPSRAESPLRDEYTTMCCCGTDEGCPGSEPRAAKEEPLEKN
VNCGANAQGVLGLSVLDSINTGKLFTVNKNSLNNYSRNFSSLNEDELPAANSLEGKRSDL
FPKSMYGAAEDSHSDAESVTEIFDSANEVLLGPCAAADTPASCIVTESDEEQIEICCVNN
ELQKPAQEQHLASATSSSSLSPYGGKVGQTEGCVLCGSLETSINKLGLEDHGGPTPCPSQ
CSDVSSAYLCSPSSVFLPEKDILKNSVTISEVYSFCNNGALSTEEQICLGNSNGHTKGCE
STEEEGSLYCKNRSFCSARNVNGLDNNLLEKEGCHDEQKSKSESETVVDDCNHAVSYCLV
KKETNSLSNLSKPDSDHMNASLTKAISLRSPSPARSKDPKANTTHDLAGKNEKTNSVASG
RTSNGKVQSSGTNHCKGAAVPHSPSSQKKSCQESKGMAQKSIMDTLLNNQKAKAGPKLRG
FTIKSKAKANLDTSGINPTKVSGADQKRASVSPQLSPKLLGKKTPLSRNSPTNPDPGKSI
SATSRTLKSELENKPSLVVSEDSLLPVLNGTGSPTVSGEMKRACGELTDLQQAWGKTKEK
QVSMQPVLCQGKDAKVDDLRARGSQSKFASSPQGIPKVEYVKGSTESPGTDLDTVKSIYS
ADDLRQLHLQNTGPSAGGFSSLRSPSVQPGQXXXXXXXXXXXRTFIEVKLSSSSSSSSSS
SASSSPAPFLQLPLLEKTEEANTEVPLLTEGVGTVQYFSKADAAGDKNLCGLSKPVTRTY
SMPSQLSGHLREDCRVAEVHAVQGPQGHAAEEKYPQVATGMLKMVHLNLPNGQSGREQAY
TSKSTQRVHDTSPSCSDVSCPAADKLRSFRRSYYYYELNWPHEPTSSFSVKQRIKSFENL
AN
NT seq
6127 nt
NT seq
+upstream
nt +downstream
nt
ttacctggccgagcagtgctggaatggcggcttcgtctacctgatcatgttgcgccgcat
caagcgcaaagcccctcttcctccctccaacggcaacaatagcaacagctgcgactccaa
agccaagcccagtcctgaacccggtgacagagcctctcaaaatgggaaaaggaccaggaa
gtttggggtcatcactagaacaccgggcagcaaggacagtaaagaaaagccagtctcgga
gcacgggaatgggcactgcactccaatggaggtggaggttgctcctccggacacctctga
agcagaaagcaatggagaggagcagcttcgggacactggggagcagtaccggtgccaact
gtcagatagtggtgtgccagaccttggtgaccagtctgtccagcgagaaggttgccgcat
atggaagatgcacatcctgaaggggacggacggactgggaatccagataacaggaggcag
agggtcaaagcggtcccctcacagcatcatcgtcacccacgtggaggaaggcggctccgc
acacagggacggcaggctgacagtgggtgacgagctcctcatgatcaacgggcagtcact
ggttgggctctcccaccaggacgccgtggctctccttcgctctgctgctggcctggtgca
gctggtggtcgctagcaaggaatctgctgaaggggattttctgaagtacccaactaccag
tttgccagacttgcttagcacttgctcagtccaagactctgtctcttgcactgacaataa
ggaaaacgaagagccagaagaagaagatgtgaaaggagtgaatatgtctcctgaaaaact
gtttgctgtgatggaaacagagaagtctcacgatccagtttgtgcagaagtgtccaaagg
aaacaaccagaatccaactctgggaagtggcatactgaaatacagaagtcgatcccaagg
tgctggatcccgcttggagtctgtgggagaagacgatgagctgacagtggaaaacggtga
atcgaattatgaaatagcggtgaaatattcccggggtggaagaaagcactctctgcccca
gcagctggagtcggcaggagcgaggcaggactaccatattgtgaagaagtccactcgttc
cttcagtgctgcccaagtggaatctccatggagactgacccagccatccatcatttccaa
cattgtcctgatgaaaggacaaggcaagggtcttggattcagcattgtgggaggtcagga
ttctgctcgcggacgcatggggatttttgtgaagactatattcccaaatggagcagcggc
tgctgatggaaggcttaaagaaggggatgaaatcctagaagttaatggagagtctctaca
aggactgacccaccaggaggccattcagaggtttaagcaactcaagaaaggtgtggtgac
cctgacggtgcgcacacggctgcgcagccccagcctcacaccctgtgtgactcccacctt
gctgagccgctccagctcccctagctccagcaccagtggtggcatgatggtccccggccc
cgacgagggggatggatgctcctccagccgcaaaggacctggcccaaaggacaggatcat
catggatgtaacgcttaataaagagccaggggttgggctcggcattggtgcctgttgtct
cacgctggaaaacagttctccagggatatacattcacagcctggccccaggatcagtggc
taaaatggatggcagattaagtcgaggtgaccagatcctggaggcggattcggtgagtct
gcgacacgcggcgctaagtgaagcctacgccatcctgagcgaatgtggtccaggtccagt
cagcctgatcattagtcggcatcctaacccaaaggtttctgagcaggagatggatgaggc
aatcgcacgtacaacccatcgagagagcaaggatgccagctcctctcacgtcacaggagc
tgtacaaaaaagtccatctcctagtgtgaagaccaaacaagtagagacctcgtctcccct
cagctggactatgaagcgtttcctggagccagcaagccggggatctgtcagctctgaggc
agagctttcccagtacttctcgcacgatggtacgacccagctcccgttttctgatgctgt
aaccggctcctgcagtgaagagcacctccgtcagaagaacaggaatagtttgttggatga
tggatctcttctccctgccactagagaagcaggagtgacaaaagcaaatggtctggcttc
tccaagtagcgggagatcatctggccttcacaacaaacatgtggagtctgtacgacctgg
catcctcagtgacagccccaaatctggccgcagtcccttccatcggcagaggagggttgt
tttctatgatggtgatgttagtgatgatgatgaaagttcccacctgcaaagaagccagag
ggccaagagccaggaggatacttccattgtcattacaacctcatctgtagaaatcgatga
tgagagccaggacagcgagtcacctagatacagtagcacggagacatcttcccctgtctt
cagcaattctgtggagtctgcagatcgcacgctggaacaaattgattctcctttcttccc
catcatagcatttgattactcaagtgtgcccgaagttcgtcttgccagcctcagtttgaa
ggagctccgggaagcacaactcgaatctaagagatcaccaaaacttgagcacagagcagt
cacacgagtgaaaagcatgatgagcactgagtgccgaagccttcagaggcagaagacaga
ggagcatggctcttacaacaagcctgttgcaaggacgctccgtcatagcaagaaatgtga
agcacccgatggggccgggcaggtccagggtgaaatagtcactctggttcgcaatgagca
tgagtcattcggcctggacttggaaatccaggccatgcccttgaaggttgttgtcacagg
gctgcggccaggtggagcagcagaaatgggatcaatgggcaagatggctgtaggagatga
gattaccaccatcaacagtatcccagtcagtaaaatgacgtacgaggaaatctgcttgct
tatgcagtgtcttcccacatctgtaacactggagatccagaaagcagcaccagctgtcag
caggtttacaaacttcatcctgactccagggggagacagtcaaaatccagccgatgccaa
cagcatcctcgcaactgaggaagagctaagcgctgagaagcgagaaggagcaggtttgca
gaacgctggcagcagcggtgcgctggagagaacaacactgccacctgatgccacgagcaa
agacgtgcaaagaggtaccatgagaagcagccgcaccgaggacaactctgccatccctgt
cactgatatcgatgacttgctcagccaaatgagtgctcctgagagcagggcttcacgcac
cccatcgcgagcagaaagccccctccgagatgagtacaccacgatgtgctgctgtgggac
tgacgaaggctgtcctggatctgagccacgagcagccaaggaggagccgctggaaaaaaa
tgtgaattgtggagctaatgcacaaggggttttggggctgtctgtgttggactccattaa
cacaggcaaactttttactgtgaataaaaactctttaaataactattctaggaattttag
cagtttaaatgaggatgagttgcctgcagcaaactctctggaaggtaaaagaagcgacct
gtttccaaagtctatgtacggggctgcagaggattctcactcagatgcagagtctgtcac
ggaaatcttcgacagtgctaacgaggtgttgcttgggccgtgcgctgctgctgacacccc
tgcatcctgtattgtaacagagtcagatgaggagcaaattgagatttgttgcgtgaacaa
cgagctgcaaaagcccgcacaggagcagcatcttgcgtctgcaacaagctcatcctctct
gtccccttacggtggcaaagttgggcaaactgagggctgtgtgttgtgtgggtcactgga
gacaagcatcaacaaactaggcttagaagatcatggtggtcccactccatgtccctcaca
gtgttcagatgtgtcttctgcatatttgtgttctccttcctcggttttcctgccagaaaa
agacatcctaaagaattcagtcactatctctgaagtttactctttctgtaacaatggtgc
cttaagtacagaagaacagatatgtttggggaacagtaacggacatacgaaaggctgtga
atccactgaagaggaaggttctctgtattgcaaaaatagaagcttttgctctgctagaaa
tgtcaatggcttggacaacaacttgcttgagaaagaaggatgtcatgatgagcagaaatc
caaatctgaaagcgaaacggttgttgacgactgtaatcatgctgttagttattgtttagt
gaagaaagaaaccaacagtttgtccaacttgtctaaaccagatagcgatcacatgaatgc
atcattaacaaaagcaatatcactcaggtctccctctcccgccagatctaaagatccaaa
ggctaatacaactcatgacttggcagggaaaaatgagaaaactaactctgtggcttcagg
aaggacttcaaatggaaaagtccaaagctcaggcacaaatcactgcaaaggagctgcagt
accgcacagcccatcctcacagaaaaaatcctgtcaggagtctaaaggaatggcacaaaa
aagtataatggacacccttttaaataatcagaaagccaaagcaggaccaaagctaagagg
gttcaccatcaaaagtaaagcaaaggcaaatttggatacttctggcattaatcctaccaa
agtcagtggggctgatcagaaaagggcttctgtttcaccacagctctcccctaaacttct
ggggaagaaaacaccattgtcccgtaattcacctacaaacccagatcctggcaagagcat
ttcagcaacatcaaggactctgaagtcagagctagaaaataaaccatctctggtagtttc
tgaagattcacttctacctgtcctgaatggcacaggcagcccaacagtgagcggtgaaat
gaagcgtgcttgtggggagctgacagacctgcagcaggcatggggaaagacaaaagaaaa
gcaagtttccatgcagcctgtgctatgtcaaggtaaggatgctaaggtggatgatttgag
agccagaggcagtcagtccaaattcgcgtcatctcctcaggggataccaaaagttgaata
tgtgaaagggagtactgagagccctggaacagatctagacacagtcaagagcatctatag
tgcagatgaccttaggcaattacatctgcaaaacacaggaccgtctgctggaggcttttc
ttcattgaggtccccctctgttcagccggggcagtnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnngcgcactttcattgaggtgaagctttcctcatcatcatcctcttcctcctcctc
ctctgcctcttcctcaccagcaccatttttgcagttgccattgctggagaaaacagaaga
ggcgaacacagaagtgcctctgctgactgagggggtggggaccgtgcagtatttctcgaa
agcagatgctgctggagacaaaaatctctgtggcttgtcaaaacctgtgacgaggactta
ctcaatgccatcccagttgtcgggtcacttgagggaagactgccgtgttgcagaggttca
tgctgtgcaaggcccccagggccatgccgcagaggagaagtatccgcaggtggcaacagg
gatgttaaaaatggtccatctgaatctgcccaatggccagagcgggagagagcaggcgta
tacctccaaaagcacccagagggtccatgacacgtccccctcatgcagtgacgttagctg
ccccgctgccgataagctgaggagcttccggaggagttactactactacgagctgaactg
gcctcacgaacctacctcatccttctctgtcaaacagaggatcaaatccttcgaaaacct
ggcaaat
DBGET
integrated database retrieval system
