Apaloderma vittatum (bar-tailed trogon): 104280197
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Entry
104280197 CDS
T08559
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit00260
Glycine, serine and threonine metabolism
avit00630
Glyoxylate and dicarboxylate metabolism
avit00670
One carbon pool by folate
avit01100
Metabolic pathways
avit01200
Carbon metabolism
avit01230
Biosynthesis of amino acids
avit01240
Biosynthesis of cofactors
avit04981
Folate transport and metabolism
Module
avit_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
104280197 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
104280197 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
104280197 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
104280197 (SHMT1)
Enzymes [BR:
avit01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
104280197 (SHMT1)
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Paralog
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
104280197
NCBI-ProteinID:
XP_009876074
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All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MANSTQGLPSAELWASHNRMVMEPLDSNDPEVHNIIKKEKQRQKLGLELIASENFASRAV
LEALGSCLNNKYSEGYPGQRYYGGTEFVDELERLCQERALQAYRLDPQKWGVNVQPYSGS
PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSVFFESMPYKVNPKTGYI
DYDRLGENAPPFXPKLIIAGVSCYSRNLDYARMRKIADANSAYLMADMAHISGLVAAGVV
PSPFDHCDVVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETLYNLESLINQAVFPGLQ
GGPHNHAIAGIAVALRQAMTPEFKAYQQQVVANCQALSKALMELGYDIVTGGSDNHLILL
DLRNRGTDGGRAERVLEVCSIACNKNTCPGDISALRPSGLRFGTPALTSRGFQQDDFRKV
AQYIHRGIELTLRVQKDMSPKATLKEFKDKLEEATYRRDLKALKDEVEAFAATFPLPGLP
IL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcaacgcagggccttcccagcgcagagctctgggcctcccataacaggatg
gtaatggagccactcgacagcaatgacccagaggtgcacaacatcatcaagaaggaaaag
cagcggcagaaactggggctggagttaattgcttcggaaaactttgctagccgagctgtc
ctggaggctctgggatcctgcttgaacaacaaatactctgagggctacccaggacagagg
tactatggtgggacagagtttgtagatgaactggaaaggctgtgccaggagcgagccctg
caggcgtaccggctcgacccccagaagtggggcgtcaacgtccagccctactcagggtca
cccgcaaactttgcggtatacacggccctggtggaaccccacggcaggatcatggggctg
gacctgcccgatgggggccacctcacccatgggttcatgacggacaagaaaaagatctct
gctacttccgtcttctttgaatccatgccctacaaggtcaatcccaagactggttacatt
gactacgaccggctgggggagaacgccccccccttcnncccaaagctgatcatagcaggt
gtcagctgctactcgcgcaacctggactatgctcgcatgcgaaagatcgctgatgccaac
agcgcctacctcatggctgacatggcccacatcagcggcctggtggctgccggcgtggtg
ccctcccctttcgaccactgcgatgtcgtctccaccaccacccacaagaccttgaggggc
tgcagggccggcatgatcttctaccgcaaaggcacccgcagcgtggaccccaaaacgggc
aaggaaacgctctacaacctggagagcctcatcaaccaggcagtcttccctgggctgcag
ggaggcccgcacaaccatgccattgcagggattgctgtggcgctgcggcaggccatgaca
cccgagttcaaagcctaccagcagcaggtggtggcgaactgccaggcgctctcaaaggcg
ctgatggagctgggctacgacatcgtcacagggggctccgacaaccacctgattctcctg
gacctgcgcaacagaggaacagacggcggccgggctgagcgggtgctggaggtctgctcc
atcgcctgcaacaagaacacgtgtcccggtgacatcagcgccctacgtcccagtggcctg
cggtttgggacaccggctctcacttcccggggtttccagcaggatgatttccgaaaagtg
gctcagtacatccacagagggattgaactgacgctgcgcgtgcagaaggacatgagcccc
aaggccacgctgaaggaattcaaggacaaactggaggaggccacgtaccgaagggacctg
aaggcactgaaggatgaggtggaggcctttgcagcaaccttcccgctcccggggctgccc
atcctgtga
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