Apaloderma vittatum (bar-tailed trogon): 104280292
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Entry
104280292 CDS
T08559
Symbol
SUPT6H
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avit03021
]
104280292 (SUPT6H)
03036 Chromosome and associated proteins [BR:
avit03036
]
104280292 (SUPT6H)
Transcription machinery [BR:
avit03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104280292 (SUPT6H)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
104280292 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
104280292
NCBI-ProteinID:
XP_009876198
LinkDB
All DBs
Position
Unknown
AA seq
1718 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEELNLDDQDEQGNLKGFIND
DDDEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKM
SDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPPEEEEEEEEDESDIDD
FIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYEYE
DEETEGETRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLRSI
PVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKEAL
NFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQAY
QYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAK
AARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQTAGLDGLAKKFGLT
PEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREPLV
RQVLRQTFQERAKINISPTKKGKKDIDEAHYAFSFKYLKNKPVKELRDDQFLKMSLAEDE
ALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFLC
VQIAKELKNKLLVEAKEYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGIRVL
GIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFLLN
KKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSENE
FRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYCEF
INRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCH
MGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAED
ANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPYR
SPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQ
QDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVGMT
VHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDMKRKQQR
TTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHVD
VREEGKENAFSLGSMLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDKKK
LEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFP
TVNGLFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQMFS
AIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSYSYTT
PSQPITTPQYQLQANTTXPXXXXXQPSSSSRQRQQPKTNSHAAIDWGKMAEQWLQEKEAE
RRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttcgtagaaagtgaagcggaggagtcagaggaggagtacaaccaggatggg
gaggttgtgcccagggttaccaagaagtttgtagaggaagatgaggatgatgaggaagag
gaggagttgaatcttgatgatcaagatgagcaaggcaacctgaaaggattcattaacgat
gatgacgatgaggaagaggaggaggaagccagtgactctggagactctgaggacgacgtt
ggccacaagaagagaaagcgcacttttgatgaccgcctggaggatgatgattttgacctc
attgaagagaacttgggtgttaaagtcaaaaggcaaaaattcaggcgcgtgcgaaaaatg
tccgatgatgaggatgacgaggaggaagattatggaaaggaagaacatgagaaggaagcc
attgctgaagaaatctttcaggatggtgaaggcgaggagggaggggaagctgttgaagct
cctgttgctccaccagaagaggaagaggaggaggaggaagatgaatctgacattgatgac
tttattgtggatgatgatggacaacctctgaagaagccaaaatggcggaagaagctccct
ggatacacggatgctgctttacaggaagcccaggaaatctttggtgtggactttgactat
gatgaatttgagaaatacaacgagtacgatgaggagatggaggaggaatatgagtacgag
gatgaggaaaccgaaggggagacccgtgtacgacccaaaaagacgaccaagaaacgcgtc
agtcggcgtagcatctttgagatgtacgagcccagtgagctggagagcagtcacctgacg
gaccaggacaacgagatccgcatgacagacatgcccgagaggttccagttgcgatccatc
ccagtgaagagcgctgaagatgatgagctggaggaggaagctgactggatttacaggaac
gcgtttgcaacacccaccatctccttgcaggaaagttctgattacctcgaccgcggacaa
gccagcagcagcttcagccgcaaggggcccagcaccatccagaagattaaagaagccctg
aatttcatgagaaatcaacattttgaggtcccgttcatcgccttctacagaaaggagtat
gtggagccagagctgcacatcaacgacctgtggagggtctggcagtgggatgagaagtgg
acccagctgaagatccgcaagcagaatctgacacgtctgtttgagaagatgcaggcctat
cagtatgaacaaatctctgctgacccagacaagccgttggcagatggaataagggctctg
gatactactgacatggagaggctgaaggacgtgcagtccatggacgagctgaaggacgtg
tataatcacttcctgctgtactatgggcgagacatccccaagatgcagaatgctgccaag
gctgctcggaagaagcaaaagcgtatccgagaggatggtgaagaggaagaaggtgaaggg
gaagatgcagaagatgatgaacagaaagggcctgagctgaagcaggcgtcccgtcgggac
atgtacaccatctgtcagacagctgggctggacggcctggctaagaagtttggtctgaca
cctgagcagttcggagagaatctccgagacagttaccagcgtcacgagacagagcagttc
cctgcagagcccctggagctggccaaggattatgtgtgtagtcaattcccaagccctgaa
gctgtgctggagggagctcggtacatggtggctttgcagatagccagggagcctttggtc
aggcaggttctgagacagactttccaagaaagagctaaaatcaacatctcgccaaccaaa
aaggggaagaaggatattgatgaagcccactatgcattttcctttaaatacttgaaaaac
aagcctgtgaaggagctgcgagatgaccagttcctgaaaatgagcctggcagaggacgag
gcactgctcaccatagatatcagcattgacatgaaaggagtggagggttacggtagtgac
cagacgtactttgaggaaatcaaacagttctattaccgggatgagttcagccaccaggtg
caagagtggaatcggcagcgtacgatggccatcgaacggtccctcaaccagttcctctgc
gttcagattgctaaggagttaaagaacaagctgttggtggaggccaaggagtacgtcctc
aaggcttgcagccggaagctgtacaactggctaaaagtggcttcgtaccgtcctgatcag
caagtggaggaagatgatgatttcatggatgagaaccaagggaaagggattcgggtgcta
ggcatagccttttcttcagccagggaccaccctgtgttttgcgcccttgtcaatggagag
ggagaggttacagacttcctccgattgccacatttcacaaagagaaggaatgcctggcgt
gaggaagagagggaaaagaaggcccaggatattgaaaccttgaaaaaattcctcctgaac
aagaagcctcatgtggtgacaattgcaggggagaacagggatgctcagatgctgatggag
gatgtaaagagaattgttcatgagctggatcaagggcagcagctgtcctctatcggagtg
gagctggtggacaatgaactggccatcctctacatgaacagcaagaagtctgagaatgag
ttccgggattacccacctctgctgcgccaagccgtctcccttgctcgccgcattcaggac
cctctcattgagtttgcccaggtctgcagctctgatgaggatattctctgcctgaaactc
caccctctgcaggagcacgtggtgaaggaggagctgttgaatgccctctactgcgaattc
ataaaccgtgtgaacgaggtgggagtggacgtcaatcgggcgattgctcacccgcacagc
caggctttgctgcagtacgtgtgtggcctgggaccacgcaaaggcactcatctgctgaag
atcttaaaacaaaacaacacacgtctggagaacaggacccagctggttacgatgtgtcac
atgggacccaaagtgtttatcaactgtgctggcttcatcaaaatcgacaccgcatcgctg
ggtgacagcaccgattcctacatcgaagtcttagacgggtctagggtccatcctgaaacc
tatgaatgggcaagaaaaatggcagtggatgccttagaatacgatgagtcagcggaagat
gctaatcctgcaggagctctggaggagattctggaaaaccctgaacgtctgaaagacctg
gatcttgatgcctttgctgaagaactggaaagacagggctacggtgacaaacatatcact
ttgtatgacatccgagctgagctaagctgcaggtacaaggacctgagaaccccgtaccgt
tctccaaacacggaagaggtcttcaatatgctgaccaaagaaactccagagactttttat
ataggtaaaatgatcatctgcaatgtaactgggatagcccacaggcggccacaaggagaa
agctacgaccaggcaatacgaaacgatgaaactggcctttggcagtgtccgttctgtcag
caggataacttcccagagctcagcgaggtttggaaccattttgacagtggttcctgccca
ggtcaggccatcggagtgaagacacgtctggataacggcgtcgccggcttcatcccaaca
aaatttcttagtgataaggtggtcaagcggccagaagaaagggtgaaggttggaatgact
gttcactgcaggattatgaagatcgacatcgagaagttcagtgcagacctgacctgcagg
acctcagacctgatggataagaacaatgagtggaaactccctaaagacacctactacgac
tttgactctgaggcagcagatcacaagcaggaagaagacatgaagagaaagcagcagcga
acaacgtacatcaagcgagtaattgctcacccgtcattccacaacattagcttcaagcaa
gcagagaagatgatggagaccatggaccaaggggacgtgattattcggccaagtagcaag
ggggagaaccacctgactgtcacctggaaggtgaacgatgggatttaccagcacgtggat
gtccgagaagagggcaaggagaatgcctttagcctgggctccatgctttggatcaacaca
gaggagtttgaagacctggatgaaattgttgctcgctatgtccagccaatggcttctttt
gccagagacctgttgaatcacaaatactatcaggactgcaacggtggagacaagaagaaa
ctggaagagctgctgataaagaccaagaaagagaagccaacatttattccctactttatt
agtgcctgtaaagatctgcctggcaaattcctcttgggatatcagcctcgaggcaaacca
aggatagagtatgtgacagtgacaccagaaggattccgctaccggggccaggtcttccct
actgtgaacgggctcttcaaggatcattatcaggaccctgttccaggtattacccccagc
agcagcagtcggaccaggactccagcctccattaatgctactccagctaacattaacctg
gcagacctgacccgtgcagtgaacgctctgccgcagaacatgacctcccagatgttcagt
gctatcgctgccgtgacagggcagggacagaacccgaatgccacccctgcgcagtgggca
tccagccagtacggctatggaggcagcggaggcggcagcagcgcgtaccacgtgttcacg
actccagcgcagcaacctgtggccacccctctgatgacccccagttactcctacactact
cccagccagcccattacaacgccccagtaccagctgcaggccaacaccacgnngccnnnn
nnnnnnnnnncgcagccatcgtccagctccaggcagaggcagcagccaaagaccaacagt
cacgctgccatcgactgggggaagatggccgagcagtggctccaggagaaggaggctgaa
cggaggaaacagaagcagaggttgactcctcgcccgtcccccagccccatgattgagagc
acgcccatgtccatcgccggggatgccacgccgctgctggacgagatggatcgatag
DBGET
integrated database retrieval system
