Apaloderma vittatum (bar-tailed trogon): 104280299
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Entry
104280299 CDS
T08559
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104280299 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
avit04040
]
104280299 (TRPV1)
Ion channels [BR:
avit04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104280299 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ion_trans
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
104280299
NCBI-ProteinID:
XP_009876210
LinkDB
All DBs
Position
Unknown
AA seq
843 aa
AA seq
DB search
MSSILEKMKKFGSSDMEESEVTDEHTDGEDSVLETPDSLQGTLSTKVQPPKSNIFARRGR
FVMGDSDKDMAPMDSLYQMDHLMAPSLIKFHASLERGKLHKLLSTDSITGCSEKAFKFYD
RRRIFDAVAQGNTRDLDDLLLYLNRTLKHLTDDEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLREFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKPGFYFGELPLSLAACTNQLCIVKFLLENPYQAANIAAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEIIAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTMHITILTAAAYYRPVDKKEKPPFTFSHRTGEY
FRVTGEILSVLGGLYFFFRGIQFFVQRRPSFKTLIVDSYSEILFFVHSLLLLSSVVLYFC
GQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEEDNEGQDTNSSEYARCCHVKRGRTSYNSLYYTCLELFKFTIGMGDLEFTENY
RFKSVFVILLVLYVILTYILLLNMLIALMGETVSKIAQESKSIWKLQRAITILDIENSYL
NCMRRSFRSGKQVLVGVTPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGDLKRNP
SYSVKPGRVSGKNWKTLVPILRDGSRREETHKLPEEVKLKPVLEPYYEPEDSEMLKESLP
KSV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccattcttgagaagatgaagaaatttggcagttctgacatggaggagtccgaa
gtgacagatgagcacacggatggggaggactctgtgctggaaacgcctgacagcctccag
ggtacgctcagcaccaaggtgcagccacccaaaagcaacatctttgcaagacgtggccgg
tttgtgatgggagatagtgacaaagacatggctcccatggactccctttaccagatggat
cacctgatggccccttctctcattaaatttcatgccagtttggagagggggaaacttcac
aagctcctatcaacagattccatcacaggctgctcagaaaaagctttcaaattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaagggacctggatgatctgcta
ctctaccttaacagaaccttgaagcatctcacagatgatgaattcaaagagccagaaact
gggaaaacttgcttgctgaaagccatgcttaatctgcatgatgggaaaaatgataccatt
cccttgctgctggatattgcaaggaaaactggaaccctgagagagtttgttaatgcggag
tatactgacaactactacaaaggccagactgcacttcacatcgccatcgagagaaggaac
atgtacctggtgaagctcttggtccagaatggagcagatgttcatgcaagagcctgcggg
gagtttttcaggaaaattaaagggaaacctggcttttattttggagagctgcctttgtcc
ctggctgcctgcaccaaccagctctgcattgtgaaattcctcctcgagaacccctaccag
gcagccaacatcgccgccgaggactccatgggcaatatggtcctgcacacgctggtggag
attgcagataacaccaaggataataccaagtttgttaccaagatgtacaataacatactg
atccttggtgccaaaattaatccaatcctgaagcttgaagaactcactaacaagaagggg
ctgactccattaactctggcagccaaaacagggaagatagggattttcgcttacatcctc
agacgagagatcaaagatcctgagtgcagacacttgtctaggaagttcactgaatgggct
tatggacctgtccactcatctctttatgacctgtcctgtatagacacgtgtgagaaaaat
tcagtgcttgagattattgcgtacagcagtgaaacgccgaaccgtcatgagatgctgctg
gtggaaccccttaataggctgctgcaagacaagtgggaccggttcgtcaagcatttattt
tacttcaacttctttgtctataccatgcatatcaccatcctcaccgcagctgcttactac
agacctgtagacaagaaggagaagcctcccttcacgtttagtcacagaactggggaatat
tttcgagtgactggagagatcctgagtgtcctgggaggtctctatttttttttcagaggg
atacagttttttgtgcagaggcgcccgtcgttcaagacactgatagttgacagctacagt
gagattcttttctttgttcactccttgctgctcctgagctctgtcgtgctgtacttctgt
ggccaggaactgtacgtggcttccatggttttctccttggcgctgggctgggctaacatg
ctgtactacacccgtggcttccagcagatgggcatttactctgtcatgattgccaagatg
atccttagagatttatgtcgcttcatgtttgtctatctagtgttcctcttgggattttct
acagctgtggtgactttaattgaagaagacaatgaggggcaagacacaaatagctctgaa
tacgcacgatgctgccacgtgaaacgaggccgcacttcctacaacagtctctattatacc
tgcttggagcttttcaagttcactattgggatgggggacctggagttcacagagaactac
cggttcaagtctgtgtttgtcatccttttggttctctatgtcatccttacctacatcctc
ctgctcaacatgcttattgcactgatgggggaaactgtcagcaaaattgcacaggagagc
aagagcatctggaaactgcagagagccatcacaatcttggatattgaaaacagctacttg
aactgtatgaggcgctcgttccggtctgggaagcaagtcttggtgggggtcacacctgat
ggccaggatgattacagatggtgctttagggttgatgaagtgaactggtctacatggaat
actaatctgggaataatcaacgaagaccctgggtactctggggacctcaaacgaaatccc
agttactctgttaagcctggcagagtttcagggaaaaactggaaaacattggttccgatt
ttaagagatggaagcaggagagaagagactcacaaactgccagaagaagtcaaattaaaa
cctgttttggaaccttattacgagccagaagattctgagatgttgaaggaatcacttcca
aagtcagtgtaa
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