Apaloderma vittatum (bar-tailed trogon): 104280340
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Entry
104280340 CDS
T08559
Symbol
PAN3
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104280340 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104280340 (PAN3)
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104280340 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
104280340 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
104280340
NCBI-ProteinID:
XP_009876260
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MTNSSSSPSLLNDSAKQYAGHDPLTSPNSSLFNDFAALSVSQRRKLAKPAFPSFVTDLED
RYNTVLPRKYRLGMLDERIVPVGSKARKSKNPIGCLADRCKTGVPINMVWWNRVTENNLQ
TPNPSASEFIPKGGSTSRLSNVSQSSMSAFSQALFSHPSMGSPATAGLAPGMSLSAGSSP
LHSPKITPHTSPAPRRRSHTPNPANYMVPTSASASVANAVSQPPSTGQVIQKETVGGTTY
FYTDTTPAPLTGMVFPNYHIYHPAAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQ
IDQADIPAVPAEVDSYHSLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRI
HGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHF
NDPSADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDP
TKILVTGKTRLRVNCVGIFDVLTFDNSQNNPLALMAQFQQADLISLGKVVLALACNSLSG
IQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRN
DVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTE
AGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN
GQL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatagcagcagctcccctagccttctcaatgacagtgccaagcagtatgcaggc
catgatccactaacttcaccaaattcatccttgtttaatgactttgctgccctcagcgtg
tctcagaggaggaagctggcaaaaccagcatttccttcgtttgtcaccgacttggaggac
agatataatacagtcttgcccaggaagtatcgactggggatgctggatgaaaggatagtt
ccggtgggatcaaaagcaagaaaatcaaagaaccctatcggctgtctggctgacaggtgt
aaaacaggagtacccatcaatatggtttggtggaacagagtcacagaaaacaatttacag
acaccaaatccttctgcaagtgagtttattcctaaaggaggatcaacctccaggctgagt
aatgtatcccagtcaagtatgtctgccttctctcaagccttgttctctcacccctccatg
ggaagtcctgctactgctgggctagcaccaggaatgtcactgtcagcaggatcttctccc
ttgcattcccccaaaataactcctcacacatctcccgctcctcgaagaagaagtcatact
cctaacccagcaaactatatggtgcctactagtgcctctgcttctgtcgctaacgctgtc
tctcagcctccatctactggccaggtgatccagaaggaaacagtgggtggaacaacgtac
ttctacactgatacaactccagcacctctcacgggaatggtatttccaaactaccacatt
taccatccagctgcacctcacgttgcttacatgcaaccaaaagcaaatgcaccttcattc
ttcatggcagatgagctcagacaggaactgatcaacagacacttaataactatggcccag
attgatcaagctgatattcctgcagttcctgcggaagtggacagctaccacagtctcttt
cctttggaaccactgccaccgcccaatcggatacagaaaacaagcaactttgggtacatc
acgtcatgctataaagctgtaaatagtaaagatgacctgccgtattgccttcggaggata
catggttttcgtcttgttaacacaaagtgcatggtattggttgacatgtggaaaaaaatt
cagcattcaaatatagtaactttgcgtgaagtgtttaccactaaagcatttggggaacat
tctcttgtgtttgcatatgattttcatgctggaggagagactatgatgagcagacacttc
aatgaccctagtgctgatgcctatttcacaaaaagaaaatggggtcagcatgacggacct
ctaccacggcagcatgctggattgcttccagagtctttgatatgggcgtatattgtgcag
ctcagctctgcgttacggaccattcatacagcaggactggcgtgccgagttatggatcca
acaaagattctagtaacgggcaaaacaaggttacgagttaactgtgttggtatctttgat
gttttgacatttgacaacagtcaaaataatccactggcattaatggctcagtttcagcaa
gcagatctgatctcactggggaaagttgtgttggctttggcttgcaattctttatcagga
attcaaagagagaatttgcagaaagcaatggaactggtgacaatcaactattcctctgat
ctgaagaatctgattttgtatttgctgactgaccaaaacaggcttcgcagtgtaaatgat
atcatgcctatgattggtgcacgattctatactcagttggatgctgctcaaatgcgaaat
gatgttatagaggaagaccttgcaaaggaggtgcaaaatggaaggttgtttaggcttcta
gcaaaattgggaacaatcaatgagaggccagagtttcagaaggacccaacgtggtcagaa
actggagacaggtatttactaaagctctttcgagatcaccttttccatcaggtgacagaa
gcgggtactccttggattgacctcagtcacattatctcatgtcttaacaagttagatgct
ggtgtgccagaaaaaataagcctcatttccagagatgagaagagtgtacttgtggtaact
tacagcgatttaaaacgctgctttgaaaatacttttcaagaactgattgcagccgcaaat
ggtcagttgtag
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