Apaloderma vittatum (bar-tailed trogon): 104280417
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Entry
104280417 CDS
T08559
Symbol
EDAR
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
104280417 (EDAR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
avit04050
]
104280417 (EDAR)
Cytokine receptors [BR:
avit04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
104280417 (EDAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
Chordopox_G3
PFF1_TM
CLN3
DUF2852
Motif
Other DBs
NCBI-GeneID:
104280417
NCBI-ProteinID:
XP_009876364
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MAHLGERKWTHVFPFLVASLVYSASAEYSNCGENEYYNQTTGMCHDCPKCEPGEEPYMTC
GYGTKDEDYGCVPCPSEKFSRGGYQICRRHKDCEGFFRATVMTPGDQENDAECGPCLPGY
YMLENRPRNIYGMVCYSCLLAPPNTKECAGATSGISAIFPSTSGTSTFSPYQHAHKADLS
GQGHLATALIIAMSTIFIMAIAIVLIIMFYIVKTKPSAQACCKSHSVKNVEAQANTQEEK
KEVQENVVIFSEKEEFEKLTAAPAKAVKSENDASSENERLLSRSMDSDEEAAVDKQGTPE
RCLLSLVHLARDKSSTSNKSTGIQSRRKKILDVYANVCDVAEGLSPTELPFDCLEKTSRM
LSSTYNTEKAIVKTWRHLAESFGLKRDEIGGMTDGMQLFDRISTAGYSIPELLTKLVQIE
RLDAVESLCADILEWAQAMPAPEPPGTS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggctcacctgggtgaacgcaagtggactcacgtgttccctttcctggtggcctcctta
gtgtactctgccagcgccgaatactccaactgcggtgagaacgaatactacaaccagacc
actggcatgtgccatgactgccccaagtgcgagccgggtgaagagccttacatgacttgt
ggatatggcaccaaagacgaggactatggctgcgtcccctgcccttcggagaagttttcc
agaggaggttaccagatatgcaggcggcacaaagactgcgaggggttttttcgagccacg
gtcatgacacctggtgatcaggagaatgatgcagagtgtggtccttgtctcccaggttac
tacatgctggaaaacagacctcgcaatatatatgggatggtttgctactcgtgcttgttg
gcgcctcctaacaccaaggagtgtgcgggagctacctctggcatttcagccattttccca
agtacctctggcacaagcactttctcaccttaccagcacgctcacaaagcagatctttca
ggacaaggacatctggctacagctcttataattgcaatgtctaccatctttataatggct
attgccattgtcctcatcatcatgttttacattgtgaaaacaaaaccttctgctcaagcc
tgttgcaagagccactcagtaaaaaatgttgaagctcaggctaacacacaagaagagaag
aaagaagtacaagagaacgttgtgatattctctgagaaagaagagtttgaaaaacttaca
gcagctccagctaaggctgttaaaagtgaaaacgacgcatcttctgagaatgaacggctt
ttaagccgtagtatggatagtgacgaagaagctgcagttgacaagcaagggactccagag
agatgtttgttatctttagtgcatttggccagagataaatcttctacaagcaataaatca
actgggattcaaagtcgaaggaaaaagatacttgacgtgtatgctaatgtatgtgacgtt
gcagaaggtctgagccctacggagctgccatttgattgcctggagaagaccagccgaatg
ctcagctcgacctacaacacagaaaaagccatagtgaaaacgtggcgccacctcgccgag
agctttggactgaagcgggatgagataggtgggatgacagacggcatgcagctcttcgat
cgcatcagcacagcaggctacagcatccccgaactcctaaccaaactggtgcaaatcgag
cggttggatgctgtcgaatccttgtgtgcggatattctggagtgggcacaagcgatgccg
gctcctgaaccacctgggacatcctga
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