Apaloderma vittatum (bar-tailed trogon): 104280420
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Entry
104280420 CDS
T08559
Symbol
FAN1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104280420 (FAN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avit03400
]
104280420 (FAN1)
Enzymes [BR:
avit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
104280420 (FAN1)
DNA repair and recombination proteins [BR:
avit03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
104280420 (FAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAN1_TPR
Fan1_SAP
FAN1_HTH
zf-WRNIP1_ubi
PRP21_like_P
zf-TRAF
DUF5879
Motif
Other DBs
NCBI-GeneID:
104280420
NCBI-ProteinID:
XP_009876369
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MAEARSSEIKRSRLSLSLGKNKRKGTTNKVEGIPSTSSSIISFFNNAPPAKITCPMCGQM
VPRYGINEHMDETCQRNRGEIGVTDSTLNSLRNENPPAANVNDNSSPYFSKKLFNLETSP
SKGSLLKTEGSAPQRFSPYFSNNSSVWSANKEPQAQTVKIVSLGSLSSKLSRRRTRGGKQ
IVYQEIDSSPPAVHNVCKSAPALDVDDEVGAGHSSQKENQFAQRECQEQNFSEKEPKVEE
EIKSCNARDLVDVTQVSLPADNTSGKRFPLGTRSTKTESRSEDAVLSPNKFETHLTMYTS
AELTGSLEVKTQPHAQVILSSEPDLNCSTEDYSSKGDVQVLPVEVHDDFEDEINHTLLET
VEKVEFQYSVVDILDKINQVSSAPGSPGHPYYLQNFLVVLRAVLENEDDVRLFDTQDMNI
IAKFCKLSVGGQKLYVRLFQRKLNWLKVNKIEYGEISTDLSPIIEELAEARFLQTESELE
DLCEGLDLLSAPELKSLAKIFHLPNPNGQKQQLVDDFLRLAKQRSVFXXSQAGVGTAILK
RVKDLAGKSVRVCKGPRAVFSRILLLFSLPESMEDEEAGSAGQGQLFTVLMVNMGRMVFP
SYAVNRKTQVFQDREDLIRYATAAYLSNDIGTAVVNGNWEEAHHLYTRAKETWNKLKRHP
SLSYHRALPEYLRHFTVGWVYTRILSQGVETLQRLHRYKEAVQELQALLSQDVYCTDSRG
RWWDRLALNLHQHLKNTKKAIDCIRKGLADPSVRTGHRLSLYQRALRIRDSPSCKQFRCQ
LDDLPVVTVEDVTHVTIKGKMCPQMGMGKSVFLMEDIGQEEGGEDFSVSTVMCSVEELAL
THYKQNGFDQ
NT seq
2551 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagctaggtcttcagaaattaaaagatctcgactgagtttgtcacttggtaaa
aataaaagaaaaggaacgacaaataaagtggaaggtataccttcaacatcctcctctatt
atttccttttttaacaatgccccccctgccaaaattacctgtcccatgtgtgggcaaatg
gtgccaagatatggaataaatgagcacatggatgaaacatgtcagaggaaccgtggtgag
attggtgtcactgattcaacgctcaactctctcaggaacgagaatcccccagctgcaaat
gtaaatgataattccagcccatatttttcaaaaaaactcttcaatctagaaacaagtcct
tccaaaggcagtttattgaaaacagaagggagtgcaccacaacggtttagtccttatttt
agcaataatagttcagtctggagtgctaacaaggaacctcaggctcagacagttaaaata
gtctctttgggaagcttgtcatctaaactgtccagaagacggacccggggaggaaaacag
atcgtgtatcaagagattgactcgtcacctccggctgttcacaacgtgtgcaaaagtgct
ccagcactggatgttgatgatgaggttggtgctgggcatagttctcagaaagaaaatcag
tttgctcagagagagtgccaggaacaaaacttttcagagaaggaacccaaagttgaggaa
gaaataaagagctgtaatgccagagaccttgtggacgttacgcaggtgtcgttgccagct
gataacactagtggcaaaaggttcccccttggtacaaggagcaccaaaacagaaagcagg
tctgaagatgctgtacttagtcccaataaattcgaaacgcatctaaccatgtatacttca
gcagagctgaccggtagcttggaagtcaagactcagcctcacgctcaggttattctttct
tctgagccagatttgaactgtagtacagaagattactctagcaagggtgatgtacaggta
cttcccgtggaagttcatgatgactttgaggatgagattaaccatactttgttagaaact
gtggaaaaggtagaatttcaatattccgttgtggacattttagacaaaataaatcaggtt
agctctgcgcccggctctcctggtcacccctattacctccagaattttttagtcgtgctg
cgagcagtcttagagaacgaagatgatgtcagactctttgatacgcaagatatgaacatt
atagccaagttctgcaaattatcagttggcgggcagaagttatacgtgagactcttccaa
cgcaagctgaactggttaaaggtgaacaaaatcgagtatggagagataagtacggattta
tcaccaataattgaagaactggctgaagccagatttctgcaaacagaatctgaactggaa
gacctgtgtgaaggattggatttgctttcagcccctgagttaaaatccttggcaaagatc
tttcacttgccaaacccaaatggccagaaacagcaacttgtggatgattttctgaggttg
gcaaaacagcgttcggtcttcnnnnnnagtcaggctggtgttgggactgcgattttaaaa
agggtgaaggacctggctggaaaatctgtcagggtctgtaaaggccctcgggctgtgttt
tctcgaattctgctgctattttcactgcctgagtccatggaggatgaagaagctggtagt
gccggtcaaggccagctcttcacagtcctgatggtgaacatggggcgtatggtgttcccc
agttacgctgtgaataggaaaacacaggtcttccaggacagagaagatctgatcaggtat
gcgactgctgcttatctgtcaaatgatataggcaccgcagtggtaaacgggaactgggag
gaagctcatcatctgtacacacgtgctaaagaaacctggaacaaactgaaacgtcacccc
tctttgagttaccacagagctttaccggagtatctgcgacatttcacagttggctgggtg
tatacaagaatcctttctcaaggtgttgaaacattgcagagacttcacaggtataaggaa
gcggtgcaggagctgcaggctctgctctctcaggatgtgtattgtactgacagcagaggg
cgatggtgggaccgtctagctctgaatttgcatcagcacttgaaaaacactaagaaggcc
atcgactgcatcagaaaggggctggcagacccgtctgtccgcactgggcaccgcctctct
ctctaccagcgggccctacgtatcagagactcgccgagctgcaagcagttccgatgccag
ctggatgatctgcctgtcgtaaccgtggaggatgtgacacatgttaccatcaaaggcaag
atgtgtcctcagatgggaatgggcaaatctgtctttctaatggaggatattggtcaagaa
gaaggaggcgaagacttcagcgtatccacagtcatgtgctccgtggaggagctggcactg
actcattacaagcagaatggttttgatcagg
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integrated database retrieval system
