Apaloderma vittatum (bar-tailed trogon): 104280516
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Entry
104280516 CDS
T08559
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04137
Mitophagy - animal
avit04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104280516 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104280516 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104280516 (VCP)
03009 Ribosome biogenesis [BR:
avit03009
]
104280516 (VCP)
04131 Membrane trafficking [BR:
avit04131
]
104280516 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avit04147
]
104280516 (VCP)
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
104280516 (VCP)
Ribosome biogenesis [BR:
avit03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104280516 (VCP)
Membrane trafficking [BR:
avit04131
]
SNARE
SNARE associated proteins
Others
104280516 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104280516 (VCP)
Exosome [BR:
avit04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104280516 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_7
AAA_18
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
bpMoxR
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
104280516
NCBI-ProteinID:
XP_009876491
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
IQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAV
EFKVVETDPSPYCIVAPDTVIHCEGDPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVE
LPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGE
SESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHV
IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN
ETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNP
SALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPG
CGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDS
IAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQ
LIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE
SIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQT
LQQSRGFGSFRFPSGNQGGAGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2119 nt
NT seq
+upstream
nt +downstream
nt
catccagccttgcccagatgtgaaatatggcaaacggatccacgtgctgccaattgatga
cacggtagaagggatcacggggaatctgtttgaggtctatctcaagccatacttcctgga
agcatacagacccatcaggaaaggtgacatcttcctggtccgtggagggatgcgtgcagt
ggagttcaaagtggtggagacagatccaagtccgtactgcatagtggctccggacacagt
gatccattgtgaaggagaccccattaaacgagaggatgaagaggagtcactgaatgaagt
gggctatgatgacatcggtggctgccgaaagcagctggctcaaatcaaagagatggtgga
acttcccctccgacaccctgcgctcttcaaggccataggggtgaagcctccacgtgggat
cctgctgtacggtcctcctggcactggtaaaactctgattgcccgagcagtggccaacga
aacgggggctttcttcttcctgatcaatggtcctgagatcatgagcaagctggctggtga
gtctgagagcaacctcaggaaagcctttgaagaagcagagaagaatgctcctgctatcat
cttcattgatgaactggatgcaattgctcctaagagagagaagacacatggagaggtaga
acgtcgcatagtgtctcagctgttgactcttatggatggactgaaacagagagcacatgt
gattgttatggcagccaccaacagacctaacagcattgacccggcactcaggcgattcgg
tcgctttgacagagaggtagatattggtatcccagatgccactggtcgcctggagatcct
gcagatccacacaaaaaatatgaaactggctgatgatgtggatctggagcaggtggcaaa
cgagacccatggccatgttggtgctgacttggctgctctttgctcagaagcagctcttca
ggctatcagaaagaagatggatctcatagacctagaagatgaaaccattgatgctgaagt
gatgaactcgctggctgtgaccatggatgacttcaggtgggctctgagtcagagcaatcc
ttctgctcttcgggagactgtggtggaggtgccacaagttacctgggaagatattggtgg
tctagaagatgtaaagagagaactccaggagcttgtacagtatcctgtggagcacccaga
caagttcctcaaatttggcatgaccccatcgaaaggagttctgttctatgggccacctgg
ttgtggtaagacactgctggccaaagccattgccaatgaatgccaggcaaacttcatttc
catcaaggggccggaattgctcaccatgtggttcggcgagtctgaagccaacgtgcgtga
gatctttgacaaggctcgccaagcagccccttgtgtgctcttctttgatgagctggactc
catcgcgaaggctcgaggtgggaatatcggggatggtggtggtgctgcagaccgtgtcat
caaccagatcctgacagagatggacggcatgtccaccaagaagaacgtcttcattatcgg
tgccaccaacaggccagacatcatcgatcctgccatcctgcgccctggtcgcctggatca
gctcatctacatccccctacctgacgagaagtcccgggttgctattcttaaagctaacct
gaggaaatcgccggttgccaaggatgtggacctggatttcctagctaagatgaccaatgg
tttttcgggggctgacctgacagaaatttgccagcgtgcctgcaaactggccatccgcga
atccatcgagagcgagatccgtcgagaacgcgagaggcagaccaacccttctgccatgga
agtggaggaggatgacccggtgcctgagatacgcagggatcactttgaggaggccatgcg
ctttgctcgacgctccgtcagtgacaacgacatcaggaaatacgagatgtttgcacagac
cctacagcagagccgtggctttggcagcttcaggttcccctcgggtaaccagggcggcgc
tggtcccagccaaggcacaggaggtggcagcgggggcaacgtgtacagtgaagacaatga
tgatgatctctacggttaa
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integrated database retrieval system
