Apaloderma vittatum (bar-tailed trogon): 104280526
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Entry
104280526 CDS
T08559
Symbol
SPOPL
Name
(RefSeq) speckle-type POZ protein-like isoform X1
KO
K10523
speckle-type POZ protein
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104280526 (SPOPL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
avit04121
]
104280526 (SPOPL)
Ubiquitin system [BR:
avit04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
104280526 (SPOPL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
104280526
NCBI-ProteinID:
XP_009876500
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MSRVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNTNTLK
VPECRLAEDLGNLWETTRFTDCSFYVGGQEFKAHKSVLAARSPVFNAMFEHEMEESKKNR
VEINDVDPEVFKEMMRFIYTGKAPNLEKMADNLLAAADKYALERLKVMCEEALCSNLSVE
NVADILILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNQATDIMETAGWKSMI
HSHPHLVAEAFRALASAQCPQFGIPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggttcccaccccacctcctcctggggagatgtccagtggacctgtggctgaa
agctggtgttacacacaggttaaagtagtaaaattttcctacatgtggaccattaataac
ttcagtttttgccgagaagaaatgggtgaagttttaaagagttcaacattttcatcaggg
ccaaatgacaaaatgaagtggtgcctgagagtaaatccaaagggattagacgatgaaagc
aaagactacctgtcattatatttgcttttagtcagttgtccaaaaagtgaagtcagagca
aaattcaaattctccttactgaatgctaaaagagaagaaacaaaagcaatggaaagccaa
agagcgtatcgatttgtgcaaggcaaggattggggttttaagaaatttatccgaagagac
tttttgctagatgaagctaatggtctgctaccagatgacaagcttacattattttgtgag
gtaagcgtggtccaagactcagtaaatatatcaggacagtctaatacaaacactttgaag
gtacctgaatgtcgactagcagaagatttagggaatctctgggaaactacaagatttaca
gattgcagtttttatgtaggaggacaagaattcaaagctcataaatctgtccttgcagca
cgatctccagtttttaatgcaatgtttgaacacgaaatggaggaaagcaaaaagaatcgt
gtagaaataaatgatgtagaccctgaagtttttaaagaaatgatgagattcatttataca
ggaaaagcaccaaaccttgaaaaaatggctgacaatttgttggcagctgcagacaaatat
gcactggaacggctgaaggtcatgtgtgaggaagcactctgtagtaacctctcggtagaa
aatgttgctgatattcttatcctcgcagatttgcacagcgctgaacagttaaaagcacaa
gcaatagacttcattaacaggtgcagcgttcttagacaacttgggtgtaaagatgggaaa
aactggaatagcaaccaagcaacagacataatggaaacagcgggctggaagtccatgatc
cactcccaccctcacttagtagcagaggcctttcgcgcactagcatctgcacagtgtcca
cagtttggcattccacgcaaacggctaaaacagtcatga
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