Apaloderma vittatum (bar-tailed trogon): 104280608
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Entry
104280608 CDS
T08559
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104280608 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
avit04131
]
104280608 (VPS8)
Membrane trafficking [BR:
avit04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104280608 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
WD40_CDC20-Fz
TPR_Vps41
WDR55
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
104280608
NCBI-ProteinID:
XP_009876609
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
ATSVQSVVSDVQIDDKEFDIPQVDTPPTLESILNETDDEDESFILEDPFLLNIDNTDTHS
YDTSSVASSDSGDRTHLKRKKKLPDSLSLHGSVIRLSLLKGISAQIVSAADKVDAGLPTA
IAASNLIAVGTSHGLALIFDQNQALRLCLGSTAVGAQYGAISALSINNDCSRLLCGFAKG
QITMWDLASGKLLRSITDAHPPGTAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRT
CESRCLFSGSKGEVCCIEPLHAKVELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTF
PYGRMDPSSVPLLAWHFVAVQNSVNPMLAFCRGDVVHFLLVKRDDTGAIHVTKQRQLHLH
YDLINFTWINSRTAVLLDSVEKLHVIDRQTQEELETIEISEVQLVYNSSHFKSLATGGNV
SEALALVGEKACYQSISSCGGQIFYLGTKSVHVMTLRSWRERVDHLLKQERLTDALALAW
SFYEGKAKAVVGLSGDTSKRKAVIADRMVEILLHYADRSLKKCPDQGKIQVMEQHFQDVV
PVIVDYCLLLQRTDLLFNQIYDKMSENSVAKGIFLECLEPYILSDKLMGITARVMKDLLL
HFQDKNRLENLEACIVHMDITSLDIQQVVLLCWENRLYDAMIYVYNSGMNDFISPMEKLF
KVIAPPLNAGKSLTDEQVVMGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIR
LHSTEGSVDEEVYPYVRTLLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMV
ENSDFTPSQVGCLFTFLARQLAKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLE
LLQAGGIVQFEESRLIQMAEKAEFYQICEFMYERELRYDKIIGCYLRDPVRKEEVFNYIH
NILSMPGYSAEEKQSVWQKALEHIEELLLLSPCKAADLVAIHFSEQIESIITNLQDQFLL
FQFLRSLLDPREGINQDLIHLPPCITEQFVELLCQYSPDQVLETLKVLEYCRLEETIQIT
QKYQLHEASSYLLEKKGDIHGAFLVMLERLQSKLLMLTQDDESSPELLLLENIEDTLMKT
IALCQRNSHNLDQQQRE
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
gcaacctcagttcagtctgtggtttctgatgtgcagatcgatgacaaagaattcgacatt
cctcaagttgatacccctccgacactggagagcatcctgaatgagactgatgatgaagat
gagtctttcattttggaggatccctttctcttgaacattgataacacagatacacactcc
tatgacacatcctctgtggcaagctctgacagcggcgaccggacacacttgaaaagaaag
aaaaaactcccagattctctctcgctccatgggtcagttatacggctctcactcctgaaa
ggaatttctgcccaaatagtatctgcagcagacaaagtagatgctggcttgcccactgca
attgcggcatcaaatctgatagcagtggggacttcccatggcttagcattgatatttgat
caaaaccaggctcttcgactgtgtctgggcagcactgctgttggggcccagtatggagct
atctctgctctcagtatcaacaatgactgttcgaggctcctgtgtggctttgccaaggga
cagatcacaatgtgggatctggccagtgggaagctgctacgatcaataacagatgcccac
ccaccaggaacagccattttgcacatcaagtttacagatgacccgacgcttgcaatttgc
aatgacagtggaggctccgtgtttgaactgtcatttaagagggttatgggagtgagaacc
tgtgaatctcgctgtctcttcagtggctcgaagggggaggtgtgctgtattgaaccatta
catgcaaaagttgagctgagagaccatcctatcacccagtattcactgctggccatggcc
tccctcacaaagatactggttattggcctgaagccatctctgaaagtgtggatgaccttt
ccctatggtcgtatggacccttctagtgtccctcttctggcatggcactttgtggctgta
cagaactctgtgaaccccatgcttgcgttttgtcgaggagacgtcgttcattttcttctg
gtgaagagagatgataccggtgcaatacatgtcactaaacagaggcagcttcatctacac
tatgacctcatcaactttacttggataaactcacggacagcagtgcttctagacagcgtg
gagaagctgcatgttatagatcgtcagacacaggaggagctggagaccatagagatctca
gaagtacagctagtctacaacagcagccacttcaaatcgctggccacgggaggcaatgtc
agtgaagccctggcattggttggggagaaagcttgttatcagtccatcagcagctgtggt
ggtcagatcttttaccttggaactaagtctgttcacgtcatgacattgagaagctggaga
gagagagttgatcaccttctgaaacaagagcgtctcactgatgccctggctctcgcttgg
tctttttatgaaggtaaagcaaaggctgtagtaggcttgtctggggacacgagcaagagg
aaagcagtcattgcagacaggatggttgaaatccttctccattatgctgatcggtctttg
aagaaatgtcctgaccaaggaaaaatccaggttatggagcaacattttcaggacgtggtg
cctgtcatagttgattactgcctcttactgcagcgcacggatctcttgtttaaccagata
tatgataagatgagtgagaattctgtagctaaaggcatctttctggagtgcttggagcca
tatatcttaagtgataagctgatgggaatcacagctcgggtgatgaaagacttgctgctt
cactttcaagacaagaacaggttggaaaatttagaagcctgcattgtgcatatggatatc
accagcttagacatacagcaggtagttcttctatgctgggaaaaccgtctttatgatgcc
atgatctacgtctacaacagtgggatgaatgacttcattagtcccatggagaagctgttc
aaagtcattgctcctccactgaatgctggaaagtctctcacagatgagcaggtggtaatg
ggcaacaagctgcttgtatatataagctgctgcttggcaggccgtgcatatccactgggt
gatattcctgaagatctggtacctttagttaaaaaccaggtctttgaatttctcatccgg
ctgcattcaactgagggatctgtggatgaagaggtctacccttatgttcgtaccttgctg
cactttgacactcgggaattccttaatgttcttgctctgacttttgaagactttaagaat
gacaagcaagctgtggaatatcaacagagaattgtggacatacttctgaaagtcatggta
gagaattcggacttcaccccgtcgcaagttggctgtctctttaccttccttgcccgtcag
cttgccaagcccaacaacacgttatttgtgaacaggacactttttgaccaggtccttgaa
tttctgtgcagtccagatgatgactcccgccattcggagagacaacaggtccttttagaa
ttgctccaggcaggagggatcgtacagtttgaagaaagccgtcttatccaaatggcagag
aaagctgaattctatcagatttgtgagttcatgtatgaacgagagcttcgctatgacaaa
ataattggctgttacctgcgtgacccagtgagaaaggaagaagttttcaactatattcac
aacatcctgtccatgcctggctacagcgctgaagaaaagcagtcggtgtggcagaaagct
ttggaacatatagaggagttgttgttgctgagtccgtgtaaagcagccgacttggtggcc
attcacttcagtgagcagattgagagcatcattacaaaccttcaggaccagttcttactc
ttccagtttctgaggagcctccttgatccaagagaaggcattaaccaagacctgatacac
ttaccaccctgcatcactgagcagttcgttgagctgctgtgtcagtacagcccggaccag
gttttggagacgcttaaagttctggaatactgcagattggaagaaaccatccagataacc
cagaaatatcagctccatgaagcttcttcatatttactggagaagaagggagatatccat
ggcgcctttttggttatgcttgagcgattgcagagcaagttgctgatgcttacgcaagat
gatgaaagctcgcctgaactcctcttgctagaaaacattgaagataccttaatgaaaaca
attgccctttgtcagagaaattcacacaatttagaccagcaacagcgagag
DBGET
integrated database retrieval system
