Apaloderma vittatum (bar-tailed trogon): 104280616
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Entry
104280616 CDS
T08559
Symbol
TOP1
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avit03032
]
104280616 (TOP1)
Enzymes [BR:
avit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104280616 (TOP1)
DNA replication proteins [BR:
avit03032
]
Eukaryotic type
DNA Topoisomerases
104280616 (TOP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
MrkH_YcgR_like
Motif
Other DBs
NCBI-GeneID:
104280616
NCBI-ProteinID:
XP_009876619
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MKSSSGDIKIKKEKENGFSSPPRIKDEPDDDEFYPSAKGDAKPLKRPREDDDAEYKPKKI
KTEDIKKAKKRKQEEEEDSKAKKAKSKDKVPEADKRKKPKKEEEQKWKWWEEERYPEGIK
WKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSTKAEEVATFFAKMLDHEYTTKEIFRK
NFFKDWRKEMTSEEKSTITNLSKCDFTHMSQYFKAQTEARKQMSKEEKQKIKEENERLLK
EYGYCVMDNHKERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDSKIPPPP
PGHKWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDK
IRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLHP
ELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTSILNKH
LQDLMEGLTAKVFRTYNASITLQQQLKELTNPDDNIPAKILSYNRANRAVAILCNHQRAP
PKTFEKSMMNLQSKIDAKKEQLADARRELKSAKADAKVRRDEKSKKTVESKKKAVQRIEE
QLMKLEVQATDREENKQIALGTSKLNYLDPRISVAWCKKWGIPIEKIYNKTQREKFAWAI
DMAEEDYEF
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcatcttctggtgatataaaaataaagaaggaaaaggagaatgggttctccagt
ccaccacgtattaaagatgaaccagatgatgatgagttttacccatctgctaaaggggac
gccaaacccctgaagagacctcgagaagatgatgatgctgagtacaaacccaagaaaatc
aaaacagaagacatcaagaaagcaaagaagaggaaacaagaggaagaagaggacagcaaa
gcaaagaaagctaagagcaaagataaagtccccgaagcagacaagagaaagaagccgaaa
aaggaagaggagcaaaaatggaaatggtgggaagaagaacgctatcctgaaggcattaaa
tggaagttcctagagcacaaaggtcctgtatttgctccaccatatgaacctctgcccgaa
aatgttaagttttattatgatggtaaagtcatgaagctgagtaccaaagcagaagaagtt
gccacattctttgcaaaaatgcttgatcacgagtacactacaaaggagatcttcaggaaa
aactttttcaaggactggagaaaggaaatgacctctgaagagaagagcacgatcaccaac
ctcagcaaatgtgacttcacccacatgagccagtatttcaaagctcagacagaagctagg
aaacagatgtccaaggaggagaaacagaaaatcaaagaggagaacgagcggctattgaag
gaatatggttactgtgtgatggacaaccacaaggagagaattgccaactttaagattgaa
cccccaggtctcttccgaggtcgtgggaaccatcccaaaatgggcatgttgaagagacgc
atcatgccagaagacatcatcatcaactgcagcaaggattccaagatccctccccctcca
ccaggacacaaatggaaggaggtccggcacgataacaaggttacctggctggtgtcatgg
actgagaacatccaaggctctatcaaatacatcatgttgaaccccagctcaagaattaag
ggtgagaaggactggcagaagtatgagacggctcggaggttgaagaagtgcgtagataaa
atccggaatcagtatcgagaagactggaaatccaaagagatgaaagtacggcagagggcc
gtggctctgtacttcattgataagcttgccctgagagctggtaatgaaaaagaggaagga
gagacagctgacaccgtgggctgctgctctctgagagtagaacatatcaagctgcatccc
gaactggatggccaggaatacgtggttgagttcgacttcctcggaaaagactccatccga
tactacaacaaggtccccgttgagaagagggtgtttaagaatcttcagctgttcatggag
aacaagcagcctgaggatgacctctttgaccgcctcaataccagtatcttaaataaacac
cttcaagaccttatggagggactgacagccaaggtattccgtacttacaatgcctccatc
acgctacagcagcagctcaaggagctcactaatccggatgacaacatcccggcaaaaatc
ctttcctataaccgtgccaacagagcggttgccattttgtgtaaccaccagagagctcca
ccgaagaccttcgagaagtccatgatgaacctgcagagcaagatcgatgccaagaaggag
cagttagctgatgccaggagagaactgaaaagcgccaaagctgatgccaaggtccggagg
gatgagaagtctaaaaagacagtggagagcaagaagaaagcagtgcagaggattgaggag
caactgatgaagctggaggtccaggctaccgacagggaggagaacaagcagattgctttg
ggcacctccaaactcaactatctggaccccaggatctctgttgcttggtgtaagaagtgg
ggaatccctatagagaagatctataacaaaacccagcgagagaaatttgcctgggctatc
gacatggcagaggaagactatgagttttaa
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