Apaloderma vittatum (bar-tailed trogon): 104280678 Help Entry 104280678         CDS       T08559                                  Symbol RC3H1 Name (RefSeq) roquin-1 isoform X2   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism avit  Apaloderma vittatum (bar-tailed trogon) Brite KEGG Orthology (KO) [BR:avit00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:avit03000]     104280678 (RC3H1)    04121 Ubiquitin system [BR:avit04121]     104280678 (RC3H1) Transcription factors [BR:avit03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     104280678 (RC3H1) Ubiquitin system [BR:avit04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     104280678 (RC3H1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 Prok-RING_4 zf-CCCH zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf_CCCH_4 FYVE zf-CCCH_4 Vesi_VP2 PaaA_PaaC Baculo_IE-1 zf-RING_4 TPD52 zf-RING_10 zf-RING_6 Motif Other DBs NCBI-GeneID:  104280678 NCBI-ProteinID:  XP_009862529 LinkDB All DBs Position Unknown AA seq 1134 aa AA seqDB search MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD IELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVG LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRATRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEE GGVDLPNRKTSALPNGIVSTGSTVTQLISRGTDSGYETALKPGKMDHLSSSAPGSPPELL EAVPKSSISALPVNPHPVPTRAPADLPSVSVTKQLQMVPRGSQLYNTQQADVFYQDPRGA APPFEPAPYQQGVYYPTQSMSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVSPQYTQPQQY PPMGQPIYPPHYDTRRVYPPVQPYQREEIVRGSPVPIEIPPAVVPSYVPESRDRYQQTEG YCPVAPHLSQIRPSCHRKPCNVFLSSFQPHPSLDELHRRRKEIMAQLEERKVISPPPFAP SPTLPHPFHSEEYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSV EMANVDSKAMREQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPMQA MAVQGATTKSIISDYSPYGTHGGWGGSPYSPHQNIPSQGRFSDRERLSMSDVAAHGKQLP SAEREQQLRMELQQVDHQISQQTQMRGLEAVSNRLLLQREATTLAGQPQPPPPPPKWPGM ISSEQLSLELHQVEREIGKRTRELSMESQSSLDIKNKLGTTKQTENGQLEPQSKVPAEDL ALTFSDVPNGSALTQENIGLLSNKTASLSLSEDPEGGGDNHDSQRAGVTPTSAP NT seq 3405 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccgcagtggacagattttctgtcctgcccgatttgcacacagact tttgatgaaacaatccgcaagcccatcagcttgggatgtggccacactgtctgcaagatg tgcctcaacaagctccaccgtaaggcatgcccttttgaccagaccactatcaatacagac atcgaactccttcctgtgaactcagccttgctgcaattagtgggtgctcaggttcctgag cagcagccaattactttatgtagcggagctgaagataccaagcattatgaggagggcaag aaatgtgtggaagaactggcgttgtacctcaaaccactgagcagtgcaagaggtgtgggt cttaacagtactactcagagtgtcctaagtcgtcccatgcaaaggaaactggtgacatta gttcattgccagctagtggaggaagaagggcggatcagagccacacgtgcagcgcggtca cttggggaaagaacagtcaccgagctcattcttcagcatcaaaatcctcagcagctctct tccaacctctgggctgcagtgagagccagagggtgccagttccttggaccagcaatgcaa gaggaggctttaaagctggttctgctggctctggaagatggatctgctttgtcacgaaag gtcttggttctctttgtggttcagagactggagccgcgatttcctcaggcttctaaaact agcattgggcatgttgtccagcttctttacagagcgtcatgcttcaaggtgaccaagcga gatgaagattcctctctgatgcaactgaaggaggaatttcggacttacgaagctctgaga agggaacatgattcccagatagttcagatagctatggaagcaggtttacgcattgcaccg gatcagtggtcctcactgttatacggagaccagtctcacaaatctcacatgcagtccatc attgacaagttgcagaccccagcctcgtttgcacaaagtgttcaggaattaactattgct cttcagaggactggagatccagctaacctgaatcgtcttcgacctcacctagagctcctg gcaaatattgatcccagtccagatgctccacctccaacgtgggaacaactggaaaatgga ctagttgccgtgaggactgtggttcatggcttagttgattatatccagaatcacagcaag aaagggacagatcagcaacagcctcctcagcacagcaagtacaagacatacatgtgccgt gacatgaaacagagaggaggatgcccccgaggggccagctgcacctttgcacattcacag gaggagctagaaaaattccgtaaaatgaacaagcgtctggttcccagaagacccctgagt gcctccctgggccagctgaacgaggtgggcctgccttcaggagctatcctctcagaggaa gggggagtggacttgcccaacaggaaaacttccgctctgccaaatggaattgtgtcaaca ggcagcacagtgacgcaacttatttctcgagggactgactctggttatgaaactgctctg aagccggggaagatggaccatctgagtagcagtgcccctggatcccctcctgaattgctg gaagctgtccccaaaagctctatttctgccttaccggtgaaccctcatcctgtgcccact cgggcaccggcagatctgccttcagtgtctgtcaccaagcagttgcaaatggtaccacga gggtctcagctgtataatactcagcaagcagatgtgttttaccaagatcctagaggagct gcccccccgtttgagccagcgccctaccaacaaggagtttactatcccactcagtccatg tctcgctttgtccgacctcctccgtcagctcctgaacctggtccaccttatttagaccat tacccaccctaccttcaggatcgtgtggtgagcccgcagtacacgcagccgcagcagtat cctccgatgggacagcccatatacccaccacactacgacacccggcgcgtgtatcctcct gtccagccctatcagcgagaggagattgtccgaggaagccccgtacctattgaaattcca ccagcggttgtaccttcctatgtacctgaatccagagacagataccagcaaacagagggt tattgcccagtggctccacatctcagtcagatcagaccttcatgccacaggaagccttgt aatgtatttctgtcttcatttcagcctcatcccagcctggacgaacttcaccgacgaaga aaggagatcatggcccagctagaagagcggaaggtgatttctccacctccttttgcaccg tcaccaaccttgcctcatccttttcattcagaggagtacttggatgaagacctaaaagtg gctgggaaatacaaaggaaatgactacagccagtactctccctggtcctgtgacaccatc ggctcctacattggaaccaaagatgcaaaacccaaagatgttgtggcagcaaggagtgtg gagatggcgaatgtagatagtaaagccatgcgtgagcagcgactagacatgcagcgaaga gcagcagagactggtgacgatgacctcattccatttggagaccgaccaactgtatcgaga tttggggctatctctcgtacctctaaagcgatgtaccagaactctggtcccatgcaggcc atggcggttcagggagctaccaccaaatcaatcatttcagactacagtccttatggcacc cacggtggctggggaggctctccatattctcctcatcaaaatataccttctcagggacgt ttcagtgacagggagagattgtcgatgtcagatgtggctgcccatgggaaacagttgccc tccgctgaacgagagcagcagctgcgcatggagctgcagcaagtcgaccatcagattagc cagcagacacaaatgcgaggactggaggctgttagtaacaggctgctgttgcagagggag gcgactaccctggcaggccaaccacagcccccacccccacctcccaagtggcctgggatg atctcaagtgaacagctgagcttggagctacaccaggtggaaagggaaattgggaagaga acccgggagctgagcatggagagccagtcttcattggatataaaaaacaaactgggcacc actaaacagacagaaaatggacaattggaaccgcaaagcaaggttccagctgaggacctc gcactgacattcagtgatgttccaaatggatcagccctgacacaagagaacattggcctc ctgtcaaacaagacggcatctctcagcttgtcagaggacccagagggaggaggagacaac cacgactcccagagagcgggagtcacgcccacatctgctccatga

DBGET integrated database retrieval system