Apaloderma vittatum (bar-tailed trogon): 104280775
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Entry
104280775 CDS
T08559
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104280775 (TNRC6B)
03036 Chromosome and associated proteins [BR:
avit03036
]
104280775 (TNRC6B)
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104280775 (TNRC6B)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104280775 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
104280775
NCBI-ProteinID:
XP_009876839
LinkDB
All DBs
Position
Unknown
AA seq
1815 aa
AA seq
DB search
MEDKKRKKEDKKKKESAQKVTDQKTKVPEVTKPSLSQPVAASPIGNSPSPPVNGGNNAKR
VAVPNGQPPSAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPPTAPGA
NPNNAQPVTGALLQSDSGTATDSAIGGAAASNYANSTWGPGASSNSGTNANPTHIWDKVI
VDGSDMEEWPCIASKDAESSSENTTDNNSASNPGLEKNALPGSTTNNKGKGSQCQSGSAG
NECNLGAWKSDPKAKSVQSSNPAAESNNGLGNWRNLSGQDRIGPSSGFSNFNPNSNPSAW
PALVQEGNSRKGTSESDSGSSNAQISTVGQTSREQQSKMENAGVNFVSGREQAQIHNTDG
PKNGNTNSLNLSSPNPMENKGMPFEMGLGNPSRSTDTPSQSTGERKTGSVGSWGTARGSS
GTDTVAGQSNSGNHGNNGKDREDSWKGASVQKPNGSRSDSWDNNNRSTGGGSWNFGPQHA
NESKWGEGNKLTSGVSQGEWKQLSGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQG
NSQAPCWGRSSSSAGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRT
DLDPRVLSNTGWGQTQIKQDTVWDIEEMPRPEGKSDKGTEGWESSATQTKNSGGWGDVPS
QSNQIKSGWGELSTSTEWKDPKNTGGWNDYKNSNSSNWGGGRTEEKSSSSWNDSSSKDQG
WGGRQPNQGWSSGKNGWGEEVDQTKNSNWESAGNKPVSGWGEGGQNEIGTWGNGANTGSA
SKGGWDDCKRTSTWNETGRQPNSWNKQQQQQHQQQQQEASGSWGPPPQPPSNGRPPNPNW
NSGPQPAAPKEEEPSGWEEPSPQSISRKMDIDDGTSAWGDPSSYNYKNVNLWDKNSQGGQ
APREQSLPTPMTSKSQASVWSKSTPPAPDNGTSAWGEPNETSPGWGEVDDTGASTTGWGN
APSNAPNAMKSSSKSMQDGWGESDGPVTGTRHSSWEEEEEGGVWNTAGSQGSSSSHNSTN
WGQGGKKTQMKCALKGGNSDSWMNPLSKQFSNMGLLSQTEDIPGSKMDLSVGGLPDKKFE
VDKRAMNLGDFNDMMRKDRSGFRPPNSKDMGTTDSGPYFEKLTLPFSNQDGCLGDEAPCS
PFSPSPSYKLSPSGSTLSNVGLGAIGSGLSPQNFAARQGGNHGLFGNSTAQSRGMHTPVQ
PLNPSPNIRAQVPPQFLSPQVSASMLKQFPNSGLNPGLFNMGPQLSPQQIAMLSQLPQIP
QFQLACQLLLQQQQQQQQLLQSQRKLSQAVRQQQEQQIARMVSALQQQQQRQPGMKHSPS
HPVGPKPHLDSMVPNPLNVGLSDLQTKGQIPAYGSGFGSSGMDYGMVGWKEAGTESRFKQ
WTMMEGLPSVASQDANIHKNGAIVPPGKARGGSPYNQFDIIQGDPLGGHAGPAGDSWLPA
KSPPTNKIGSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDH
QLLRDNTTGSNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFSDYKSTWSPDPIGHNPT
HLSNKMWKNHISSRNTTGLPRPPPGLTNPKPSSPWNSTAPRSVRGWGAQDSRLASASTWS
DGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYNTKQEAAKA
QTALHMCVLGNTTILAEFATDEEVSRFLAQAQPPTPAATPSAPTAGWQSLETGQNQTDPV
GPALNLFGGSTGLGQWSSGGGGGSSGGDLTGASLWGPPNYSSSLWGVPSVEDPHRMGSPA
PLLPGDLLGGGSDSI
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaagaaagaggataagaaaaagaaggaatctgctcagaaggtc
acagatcaaaaaaccaaagtgcccgaagtgacgaaaccaagtttaagccaaccagtggct
gccagcccaattggcaactctccatccccaccagtcaatggtggcaacaatgccaaaagg
gtggcagtgccgaacggacaaccgccaagcgccgcccgctacatgcctcgggaggtgccg
ccgcgattccgttgccagcaggaccacaaagtgttactgaaacgtgggcagccccctccg
ccatcctgtatgctccttgggggtggagcagggcctcctcccccaacagcaccaggagca
aacccaaacaacgcacaaccagtgacaggagcactgctgcagagcgacagtgggactgca
acagattcagcaattggaggtgctgctgcttcaaattatgcaaattccacttggggtcct
ggagcctcctcaaacagcggcaccaacgccaacccaactcacatctgggacaaggtgatt
gtagacgggtctgacatggaagagtggccttgtattgccagcaaagatgctgagtcttct
tccgaaaacaccaccgataacaacagtgcctcgaaccctggtttggagaagaatgctctg
ccaggaagcaccactaataacaaaggaaaaggaagccagtgccagtctggaagcgctgga
aacgaatgtaatcttggggcctggaaatctgatcccaaggctaaatctgttcaatcttcc
aaccctgctgccgagagtaacaatggactaggtaattggaggaacttgagtggacaagat
agaattggtcccagttctggcttcagcaactttaacccaaatagcaacccgtctgcttgg
ccggcactggttcaagaaggcaattctaggaaagggacttcagaatccgatagcggtagc
tccaatgcacagattagcacagtaggtcagacctctagggaacagcagtcaaagatggaa
aatgcgggtgttaactttgtctctggcagagaacaggctcaaattcataacactgatgga
ccaaaaaatggaaacactaactccttgaacttaagttcaccaaaccctatggagaataag
ggaatgccctttgaaatgggcttggggaacccttccaggagcactgacaccccttcacaa
agcactggagaaagaaagactgggagtgttggatcttggggtacagctagggggtcttct
ggaactgacacagtcgctggacagagcaattctggaaaccatgggaacaatggaaaggat
agagaggactcctggaaaggagcttctgttcaaaaacctaatgggtcaagaagcgattct
tgggataacaataaccggtctacgggtggtgggtcttggaactttggccctcagcatgca
aatgaaagcaaatggggtgaagggaacaaattaacatctggggtctctcagggagaatgg
aaacagctgtctgggtctgatgaactgaagattggagaatggagtggtccaaaccaacca
aattctagcactggagcatgggacaatcaaaaaggccaccctctccctgaaaaccaaggc
aattcccaggctccctgttggggaagatcttccagctctgcgggaagtgaggttggaggt
caaagcactggaagcaaccacaaagcaggaagtagtgacagtcacaattctggacgccga
tcatacaggccaacgcatcctgattgccaggcagtcttgcagactctgctgagcaggact
gatttggacccccgagtgctttcaaacactggctggggccaaactcaaattaagcaagat
accgtgtgggatattgaagagatgccacggcctgaggggaagtctgataaaggaactgag
gggtgggagagctctgccacacagacaaagaactcagggggctggggcgatgtacccagc
caaagcaatcaaatcaagtctggatggggtgagctctcaacctcaacggagtggaaggac
cccaaaaatactggaggatggaatgactataagaactccaattcttcgaattggggagga
ggaagaacggaagaaaaatcatcttcctcttggaatgacagctctagtaaggatcagggg
tggggtggacgccaacctaatcaaggatggtcttctggaaagaacggttggggagaggaa
gttgaccaaacgaaaaacagcaactgggaaagtgcaggaaacaagccagtgtctggttgg
ggtgaaggtgggcaaaatgagattggaacttggggtaatggtgcaaatacaggctctgct
tcaaagggtggatgggatgattgtaaaagaacttcaacatggaatgagacgggtcgacag
cccaactcctggaacaagcagcagcagcagcagcaccagcagcaacagcaggaggcttct
ggttcctggggtcccccgccccaacctccaagtaatgggcgaccgccaaacccaaactgg
aacagcggaccacagccagctgcccccaaagaggaggagccaagtggctgggaagaacct
tctccacagtcaatcagtcggaagatggatattgacgatggcacttcagcgtggggagat
cccagcagctataactacaagaatgtgaacctgtgggacaagaactcgcaaggaggacag
gccccacgggagcagagcctgcctactccaatgacaagcaaatcacaagcatcagtctgg
agcaaaagcactccacctgctccagataatggtacgtccgcctggggtgagccaaatgaa
accagtcccgggtggggtgaagtagatgatactggagcatcgacaacaggctgggggaat
gcaccttccaacgccccgaatgccatgaaatctagttctaaatctatgcaagatggctgg
ggagagagtgatgggccggtgacaggaacacgtcattccagctgggaagaggaggaggag
ggaggagtctggaacacagcaggctctcagggaagcagttcctcccacaactcaacaaac
tgggggcaaggaggaaagaaaacacaaatgaagtgcgcattaaaaggaggaaatagtgat
tcgtggatgaaccctttatccaaacagttttcaaatatgggcttgctaagtcaaactgag
gacattccaggcagtaagatggacttgtctgtaggtggtctcccagataagaagtttgag
gtagataaacgagccatgaatctcggggattttaatgacatgatgaggaaggatcgatct
gggttccgtccacctaattccaaagacatgggaaccacagatagcgggccttattttgag
aagctgactttgcctttctccaatcaagacgggtgccttggggatgaggctccctgctct
cccttctccccttctcccagctacaagctgtctccctctggttccacactatccaacgtc
ggccttggggcaatcggctcagggctcagtccccaaaacttcgctgctagacaaggtggc
aatcatggtttgtttggaaacagcacagcacaatcgaggggcatgcacacaccagtgcag
ccactaaatccttcccccaatatccgggcgcaagtgcctccccaatttctttctccccag
gtttcggcctccatgctcaaacagtttcccaacagtggcttgaaccctggtcttttcaat
atgggcccccagctttctccacaacagattgccatgctgagccagcttccacagattccc
cagtttcaattagcgtgtcagctcctcctgcagcagcagcagcagcagcagcagctatta
cagagccagaggaagttatctcaagctgtgcgacaacagcaggagcaacagattgctcgt
atggtgagtgccctccagcagcaacagcagaggcagcctggcatgaaacattcaccatcc
caccctgttgggcctaagccgcatctagacagcatggtacccaatcctttgaatgtgggt
ctctcagatttacagaccaaagggcaaatacctgcatacggttcaggctttggctcaagt
ggcatggattatggcatggtgggatggaaagaggctggaacagaatcccgctttaagcaa
tggactatgatggaagggctgccctctgtggcttcacaagatgccaatatccacaaaaat
ggtgcaatagtgccccctggaaaggctcgtggaggatcgccctacaaccagtttgacata
attcagggtgatcccctaggtggccatgcaggccctgctggtgatagttggttacctgcc
aaatctccaccaacaaacaagatcggaagcaaatccagcaacgccagctggcctccagag
ttccaaccaggagtgccatggaaaggtatacaaaacattgaccctgaatctgacccctat
gtgacccctggaagtgtgctgggggggacagccacatctcccattgtagatactgaccac
caacttctgcgggacaacaccacagggtctaattcttccctcaacacctcgctgccttca
cctggtgcctggccctacagtgcctctgacaattccttcaccaacgttcatagcacttca
gcaaaattcagtgattacaaatcaacatggtccccagatcccataggacacaatcccact
catctctccaacaagatgtggaaaaaccatatttcctcaaggaacactacagggctgccc
cgcccacctcctggcctgaccaatcccaaaccatcatctccatggaacagcacagcaccc
cgatcggtcaggggctggggggcacaggactcaaggcttgcctctgcatctacttggagt
gatggtggttcagttcgtcctagctactggctggttcttcacaatctcactccgcagatt
gatgggtcaaccttgaggacgatctgcatgcagcacggcccactgctgacattccatctg
aacctgacccagggcacggcccttatccgatacaacaccaaacaggaggcggccaaggcc
cagactgcactgcacatgtgtgtgttgggaaacactaccatcctggctgagtttgccaca
gatgaagaggttagtcgctttctggcacaagctcagccccctacacctgcagcaaccccc
agtgcacccacggcaggctggcagtccctggagacaggacagaaccagacagatccagtt
ggacctgcgttgaatctctttggtgggtcaacagggcttgggcagtggagcagtggtggc
ggcggcggcagcagtgggggtgatctcactggcgcttcgttgtgggggcccccaaattat
tcttcaagcttgtggggggtcccaagcgtagaggatccacacagaatgggcagccctgct
cccttactacctggagaccttctaggaggagggtcggattcaatctga
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integrated database retrieval system
