Apaloderma vittatum (bar-tailed trogon): 104280828
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Entry
104280828 CDS
T08559
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03013
Nucleocytoplasmic transport
avit03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104280828 (SRRM1)
03015 mRNA surveillance pathway
104280828 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104280828 (SRRM1)
03041 Spliceosome [BR:
avit03041
]
104280828 (SRRM1)
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104280828 (SRRM1)
Spliceosome [BR:
avit03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104280828 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
104280828
NCBI-ProteinID:
XP_009876907
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
GTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMNKVNLEVIKPWITKRVTEILGFEDDVV
IEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELK
KEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSP
VRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNSDVPKAPK
PEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSHSPSHSRPRRRHRSRS
RRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPP
KKPPKRTVSSPPRKTRRLSPSASPPRRRHRPSPPPSPPPKRRSPTPQQSNRARKSRGSVS
PSRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQYRRQNQQSS
SDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRKRERVEPPPP
ARRRPPPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTA
SPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSVSSKHRKGSPPSRSNRETRSP
PQNKRHSPSPRPRASHTSASPPPPRRGASASPQRRQSPSPNTRPIRRVSRTPEPKKTKAS
TPSPRSARRVSSSRSASGSPEPAPKKHQGTTSPARSRSPSANWSPAKKAKSPTQSPSPAR
NSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAAAAAVVVTAPDTTSAQEDQEAE
TEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSSPS
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
ggaacaagtgcagaacaggacaatcgcttcagcaacaagcagaagaagctgttgaagcag
ttgaaatttgcagaatgcttagagaagaaggtggacatgaacaaagtaaatctggaagta
atcaaaccatggataacaaaacgagtaacagaaatccttgggtttgaagatgatgtagta
attgaatttatattcaaccagttggaagtgaagaatccagattccaaaatgatgcaaatc
aacctgactggttttttgaatgggaaaaatgctagggagttcatgggagaactgtggcca
ctgctattaagtgcccaagaaaacattgctggtattccaaccgcatttctggaactgaag
aaagaagaaataaaacagcgacagatagagcaagagaagctggcttctatgaagaaacaa
gatgaagacaaggagaagagagataaggaagacaaagacaacagagaaaaaagagacaga
tccaggagtccaagaaggcgcaaatcaaggtctccttcccctcgaaggaggtcgtcgcct
gtcagaagagagcggaaacgcagccactctcgctcccctcaccacagaaccaagagccgg
agcgctactcctgcgccagaaaagaaagaagccactcctgagccagaaccctctgtgaaa
ccaaaggagactgttgttcaagaggcaacttcaaacagtgatgtcccaaaagctcctaaa
cctgaacctcctgtaccagagactaaggaaacttccccagaacgtaattcaaagaaggag
agagagaaagaaaaagagaagactcgtcaaagatccccaactcggtccaagtcaaggtca
agatctcgatcacattctccatctcattctcgaccgagaaggcgtcatagatcacggtca
agaaggcgaccaagcccaagacgacggccatctccaaggagaaggagccctcccagacgg
atgcctccccctcccagacacagaagaagcagatcccctgtgaggcggagaagacggtca
tcagcatccttatctggcagtagctcttcctcctcctcctcacgttcccgatcaccacca
aagaaaccacctaaaagaactgtctccagccctcctcgtaaaacccgccggctctctcct
tctgcaagcccccctaggcggaggcacagaccctcaccaccaccaagtccacctccgaaa
cgcaggtctccgacaccccagcagtcaaatcgggcaagaaaaagccgtggctccgtttcg
cccagcagagcatcagcacccaaacataagagtactgaaaaaagagaatctccttcgccg
gcaccaaaaccaaggaaagcagaactctctgaatcggaagaagataaaggaggtaaaatg
gctgcagcagactctgttcagcagaggcgtcagtacagacgacaaaatcaacagtcttcg
tctgattctggttcttcatcttcatctgaagaggaaagacctaaaagatccaacgtgaag
aatggggaggttggtagacgccgccgccattcacattcacgcagtccatcaccgtctcct
cgaaaacgacagaaggaatcctcccctcgcaaacgggagagagttgaaccccccccccca
gcccggcgacgaccccctccttcacctgcccctccgcccaggcggcggcgatcaccttca
ttacctcgtcgaaggtctccatcaccacccccacgcagacgctcgccctctccacggaga
tactctccaccgatacagagacgatattctccttcgccaccaccgaagagaagaacggct
tctcctcccccgcctaaacgaagggcgtcaccttctccacagtcgaaacgcagagtctcg
cactcgccgccgccaaaacaaaggagctcgcctgctgctaaaaggcgttccccttccgta
tcttccaagcataggaaggggtctcctcccagtaggtccaatcgggaaacacgctctcca
ccacaaaacaaaaggcattcaccttcaccacggcctcgagcttctcatacctctgcaagc
ccaccaccaccacggcggggagcttcagcttcgccccagaggagacagtctccatctccc
aacactagacccatcaggagggtgtcaaggacgccggaacccaagaagacaaaggcttcc
acaccaagtccacgatctgcgaggcgagtgtcttcatcgcggtctgcatcggggtcgcct
gagccagcaccgaagaaacatcaaggaaccacatctcccgctcgctctcgttccccttct
gcaaactggtcacctgcaaaaaaggctaaaagcccgactcagagcccatcacctgcacgg
aattcagatcaagaaggaggtggaaagaagaagaagaaaaagaaggataagaagcataaa
aaggataaaaagcacaagaaacacaaaaaacataagaaggagaaggctgcggcggctgca
gcagctgttgttgtgactgcaccagataccacctcagcacaggaagaccaggaagcagag
acagaacccaaaaaggagacagaaagtgaaccagaagacaaccttgacgatctagaaaaa
cacctgcgggagaaggcactgaggtcgatgaggaaggcgcaagtgtcctcaccctcctag
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