Apaloderma vittatum (bar-tailed trogon): 104280852
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Entry
104280852 CDS
T08559
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104280852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
avit03041
]
104280852
Enzymes [BR:
avit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104280852
Spliceosome [BR:
avit03041
]
Complex C
Other components
Complex C specific factors
104280852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Phage_endo_I
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
104280852
NCBI-ProteinID:
XP_009876941
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MSVKEMAKGITYDDPIKTSWRAPRYILGMSEARHDRVRKKYHILVEGEGIPPPIKSFKEM
KFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQ
EKRLPFSKREGPYGLIICPSRELARXFFYCRLLQEDGLPPLRCALCIGGMSVKEQMETIK
HGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQT
LLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVVQEVEYVKEEAKMVYLLECLQKT
PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDVLVATDV
ASKGLDFPAIQHVINYDMPGEIENYGGDWALWRGINRGVAGWMQTKQVSNIGRKDYLAHS
SMDF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgaaggagatggcaaagggcatcacctacgatgatccaattaaaaccagctgg
agagcacctcgttacatcctgggcatgtcggaggcgcggcacgatcgcgtgcgcaaaaag
taccacatcctggtggagggggaaggcatcccgccccccatcaagagcttcaaggagatg
aagtttccagcagctatcctgaggggcctgaagaaaaaaggaatccagcagccaacaccc
atacagatccaaggcatccccaccatcctctcaggaagggacatgattggcatcgccttc
actggctctgggaagaccttggtgttcaccctcccggtgatcatgttctgcctggagcag
gagaagaggctgcccttttccaagcgagagggaccctacgggctcatcatctgtccctcg
cgggagctggctcgtntttttttctactgtcgcctgctgcaggaggacgggctgcccccg
ctgcgctgtgcactctgcatcgggggcatgtctgtcaaggagcagatggagacaattaag
cacggtgtacacatgatggtcgcaaccccaggccgcctgatggacctgctgcagaagaag
atggtgagcctggacatctgccgttacttggccttggatgaggctgacaggatgatcgat
atgggctttgagggagacatccgtaccatcttctcctactttaagggccagcggcaaacc
ctcctcttcagtgccacaatgcccaagaagatccagaactttgccaagagcgccctggta
aagcccatcaccattaacgttgggcgagcgggtgctgccagcctggatgttgtgcaggaa
gtggagtatgtgaaagaggaggccaagatggtgtacctcctcgagtgcctgcagaagacc
ccaccacccgtgctgatctttgcagagaagaaggcagatgttgatgcaatccacgagtac
ctgctgctcaagggtgtggaagctgtggccatccatggagggaaagatcaagaggaacgt
acaaaagccattgaggctttccgggatgggaagaaagatgtcctggttgccactgatgtt
gcttccaagggcttggacttcccagccatccagcatgtcatcaactacgacatgccgggg
gagattgagaactacggtggggactgggccctgtggcgggggatcaacaggggggtggcg
ggatggatgcagaccaagcaagtcagcaacattggccgcaaggactacctggcccacagc
tcgatggacttctag
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