KEGG   Apaloderma vittatum (bar-tailed trogon): 104281263
Entry
104281263         CDS       T08559                                 
Symbol
GEMIN5
Name
(RefSeq) LOW QUALITY PROTEIN: gem-associated protein 5
  KO
K13133  gem associated protein 5
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:avit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:avit03019]
    104281263 (GEMIN5)
   03041 Spliceosome [BR:avit03041]
    104281263 (GEMIN5)
Messenger RNA biogenesis [BR:avit03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     104281263 (GEMIN5)
   mRNA cycle factors
    P-body specific factors
     104281263 (GEMIN5)
Spliceosome [BR:avit03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    104281263 (GEMIN5)
SSDB
Motif
Pfam: GEMI5_RBS TPR_GEMI5 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_Prp19 WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR3_2nd EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_HPS5 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd WDR90_beta-prop_4th Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_WDR41 WD40_RFWD3 WD_LRWD1 TPR_IF140-IFT172 Tricorn_2nd
Other DBs
NCBI-GeneID: 104281263
NCBI-ProteinID: XP_009877497
LinkDB
Position
Unknown
AA seq 1452 aa
CASSSDDGSVKIWDAEALAPVAGYSLHQNAISALHWSPLVKDLIVSGDEKGIIVCYWHNR
SDSQQFFPEPRTIFCLSCSPHQENLVAIGYKDGMVVIIDISXLHRLRGHDDEIHCLAWCP
VPGEERLPAWQDELQVPSEEGKVPNGELTRNTTTKKGFYLASGSKDQTIRIWSCTRGRSV
ITLKLPPTRRRGGAVDPAVKERIWLTVHWPSGRSTEIVSSSFGGELLLWDLTQSGRRKWT
LLGSSEGQNHSRIVFNLSSVKCQDKELLFSISMDRDVKCWDLSTLECCWTMPSLGGFVYS
LAFSPVDTGCLAIGVGDSMIRVWNTLSMNNAYDVKTFWQSIKSKVTALSWHPTKEGCLAF
GTDDGKVGIFDTFSSNAKNKPPQISSTYHKKTVYTLAWGPPTPPLSFGGEGEQPSVTLYS
CAGEGVVFQHNPWKLNGEANDINKVIQDTNSIKHKLPARTEISWKPDGKLLALGNEDGSI
EVFQAPNLKLLCTIQQHHKLINAIRWHHEHGSQPDLSYLIASGSINATIYVHNLKSMIES
ASEGPLTITEPFRTLAGHTAKITSLSWSPHHEGRLVSACYDGTAQVWDVMNEEPLCNYRG
HQGRLLSVQWSPVDPDSVYTGADDFSVHKWHISKQEHTRPPQGKKSIELEKKRSMQPKVK
PKKKKPVGKSPAKQDLSDSMNGDDRVKELFQEENEVLDHEREKEAQEAELPDKVSMTVSK
DTSSPAYDYSSFSLPKPFVTQKATLLKKDPPKEKPAPDASLKKRKPRSILPFTTFMDHRS
KDELHQDCLRLATCLKTKGNNEDVSPDLKDRIHLGLFTDRASLHNMIDVEGKHHLENGHP
ELFQQLMLWKGDMKGVLQAAAERGELTDQLVAMSPMVGYQAWVWTVEAFAKQLCFQEQYV
KAASHLLSIHKVYEAVELLKVNHFYREAIVIAKARLRPEDPILKDLYTSWAALLEKDGHY
SMAAKCYLGASSPYDAVKVLAKKGDLTSLKTAAELALIAGEEELSATLSSRCAQDLLLSR
NWVGAQEVLQQHKSLFGQRLVFCLNELLCKCLSERNPSDRRSPVPPCYHSWELNKGASFF
DTVIEVWQNVLGMDTAEQATCAKDQLRTLEHPPSTSNTPPKQVLFHISHDLTLAALSYQT
ATWDEAVQSIVGAVTRSYDAGNFTLMQEICIIILPEGCDNLRHKLDSTNSQSMDACRSLE
AFVAYGLLYDLWWNPPRDSVVLQKAGLDPVLCPSEETALEKSSISGHSSSEETLDQTADE
MGENFCNTTEVCSCETENGSRTSSVDLVDRQSKLSGCKVLLSEEIAALQNTQRDIAEVQQ
ILADMIHQHQQQRNNLQENTNGSTQESNLQQGSETESDKPCSDSNQMNCKDEVKEPITLP
ELTKQLLNAKQKLAEFPDNLKVFPFPSVLECCLVLLHLGSQCPPDLHEQALDLLRKHGSA
TIYRKAGRRFLA
NT seq 4359 nt   +upstreamnt  +downstreamnt
tgcgccagcagctccgacgacgggagcgtcaaaatctgggacgcagaggccctggccccg
gtggcggggtacagcctgcaccagaatgccatctcagccttgcactggtcaccccttgtg
aaagatctgattgtatctggtgatgaaaaaggtataattgtgtgttactggcacaacaga
agtgacagccagcagttcttcccagaacctcggacaattttttgtctcagttgctctcct
catcaggaaaacctggtagcgattggctacaaggatggcatggtggttataattgatatc
agcnnacttcatcggttaaggggccatgacgatgaaatacattgtctggcctggtgccct
gtgcctggtgaggaaaggttacctgcttggcaagatgagctccaagttccttcagaggaa
ggcaaagttccaaatggggagctgacacggaacacaaccacgaagaagggtttctacctg
gcttcaggaagcaaagatcagaccatccgaatatggagctgtactagaggcagaagtgtg
ataactttgaagttgccacccacgagaagaagaggtggagctgttgatcctgctgttaaa
gagcgcatttggctgactgttcactggccttctggtcgttccacagaaattgtatccagc
tcttttggaggagaactgctgctctgggatttgacccaatctggaagacgcaagtggacg
cttctgggatcctcagaaggacaaaaccactcccgaattgtgttcaatctgagctctgtg
aagtgtcaagacaaagagctccttttttccatttcaatggacagagatgtgaagtgctgg
gacctctcaactctcgaatgttgttggacaatgccctcacttgggggattcgtctacagc
cttgccttctcccctgtggacaccggctgtcttgctatcggggttggggacagcatgatc
cgggtgtggaatactttgtccatgaacaacgcttatgatgttaaaaccttctggcaaagc
ataaagtcaaaggttacagcattatcctggcatccaactaaggaaggttgcttggctttt
ggaacagatgatggaaaagttggaatatttgacaccttctccagcaatgctaagaataag
ccacctcagatctccagtacttaccacaagaagactgtatacacgttagcctgggggcct
ccaactcctcctctgtcttttggaggagaaggtgaacagccctctgtaactttatatagt
tgtgctggagaaggtgttgtttttcaacacaacccctggaagcttaatggcgaggcaaat
gacatcaacaaagtcatccaagacactaattcaatcaaacacaaactgcctgcgcgtaca
gagatcagctggaaaccagacggcaaactcttggctcttggcaatgaggatggctcaatt
gaagtatttcaggcaccaaacctgaagttgctctgcactatccagcagcatcataaactg
attaacgctattcgttggcatcacgagcacgggagccagccagacctcagttacttgata
gcttcaggctcaattaatgccactatttacgtgcataacctgaagagcatgatagagagc
gcttcagaaggtcctttgacaataacagagccttttcgaactctggctgggcacacagct
aaaatcacaagcctttcttggagtccccaccatgagggaagactggtatctgcttgctat
gatggcactgcacaggtatgggatgttatgaacgaagagccactctgcaactaccgaggg
caccaaggccgactactgagtgtccagtggtccccagtggatccagattctgtttataca
ggagcagatgatttttcagttcacaaatggcacatctcaaagcaggagcatacacggcct
cctcagggcaaaaagagtatagaattggagaaaaaaagaagtatgcaaccaaaagtgaaa
cccaagaagaaaaagcctgtaggaaagagtccagccaagcaggatctaagtgattccatg
aatggagatgatagagtgaaggaactgttccaagaggaaaacgaagtgttggaccatgaa
agagaaaaagaagctcaggaggcagagttgcctgataaagtctccatgactgtatccaag
gatacatcttcacctgcatatgattattcttcattcagcttgccaaagccctttgtgacc
cagaaagccactcttttgaaaaaggatccacctaaagagaaaccagctcccgatgcctct
ctgaagaagaggaagcctcgttctattctacccttcaccacattcatggatcacaggtca
aaagatgaattgcatcaggactgcttgaggctggctacatgtctgaaaaccaaaggtaac
aatgaagatgtgtcccctgacctcaaggatcgcatccacttggggctgttcacagacagg
gcttctctgcacaacatgattgatgtggaaggaaaacatcacttggagaatgggcatcca
gagctctttcagcagctcatgttgtggaaaggagacatgaagggtgtcctccaggcagct
gctgagaggggagagctaacagaccagctcgtagcaatgtcgcccatggttggataccag
gcctgggtttggacagtagaagcctttgcaaagcagctgtgttttcaggagcagtatgtg
aaggctgcctcccatctcctgtccatccataaagtgtatgaggctgtcgagctcctgaaa
gtgaaccatttttacagggaagcaattgtaattgctaaggccaggttgcgtccagaagat
ccaattctgaaggatctctacaccagctgggcagctctgttagagaaagatggtcattat
tccatggctgccaaatgttatttgggggcctcctcaccctatgatgcagttaaggtgttg
gcaaaaaagggggatttgacatcccttaaaactgctgcggagcttgcgcttatagctgga
gaggaagagttgtcagccactttgtcttccagatgtgcccaagacttgctgttatccaga
aactgggtgggagcccaggaagtccttcagcaacataaaagtctctttggacaaagactc
gttttctgccttaacgaactgctttgcaagtgccttagtgaaagaaatccctctgaccga
aggagccctgtgcctccttgttaccacagctgggagctgaacaaaggggcctcatttttt
gacacggtgatcgaagtgtggcagaacgtcttgggcatggacaccgctgaacaagccaca
tgtgcaaaggaccagctgcgcactcttgagcatcctccttctaccagcaacacacccccg
aagcaggtgcttttccatatctcccatgacctgacccttgcagccctgagttatcagacc
gctacctgggatgaggcagtgcaaagtattgttggagctgtgacccgcagttacgatgcc
ggtaatttcactctgatgcaagagatttgcattatcatccttcctgaaggctgtgataac
ctgagacacaaactggacagcacaaattctcagagcatggatgcctgcagaagtttagag
gcctttgtggcttacggactgctgtatgacctgtggtggaacccacccagagactccgtt
gtcttgcagaaggctggtttggatcctgtgctgtgtcccagtgaggagacagctcttgaa
aagagttccatttcaggtcactcctcctctgaagaaactcttgatcaaactgcagatgag
atgggtgaaaacttctgcaatacaactgaagtttgtagttgcgagacagaaaatggctca
agaactagctcagttgatttggtagacagacagtcaaaactgagtggctgcaaagtgctg
ctttcagaagagattgctgctttacagaacacccagagagatatagctgaagtccagcag
attttagcagatatgatccaccagcatcagcagcagaggaacaatctccaggaaaacaca
aatggaagcacccaggaaagcaacctgcagcagggttcagagactgaatcagacaaacca
tgttctgacagcaaccagatgaactgtaaagatgaagtaaaggaaccaattacactccct
gagctaacgaagcagcttctaaatgcaaagcagaaactagcagagtttcctgacaattta
aaggtcttccccttccccagcgtgctggaatgctgccttgtcctccttcaccttgggtcc
cagtgccctcctgatctgcacgaacaggctttggatctccttaggaaacacggtagtgct
accatttacagaaaggctggcaggaggttcctggcatga

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