Apaloderma vittatum (bar-tailed trogon): 104281475
Help
Entry
104281475 CDS
T08559
Name
(RefSeq) LOW QUALITY PROTEIN: nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104281475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avit03036
]
104281475
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
104281475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cohesin_HEAT
HEAT_GCN1_C
HEAT_EZ
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
104281475
NCBI-ProteinID:
XP_009877783
LinkDB
All DBs
Position
Unknown
AA seq
2049 aa
AA seq
DB search
MMMSQFSISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYAP
QSPAGYMPYSHPPSYTPHPQMQQASVSSPIVTAGMRNLHENKVSSQLSGSSANHHADNSR
HGSNEDYLQMVHRLSSDDGDPSIRNAASFSLRSPQSVCSPAGSDGTLKGSRQPLIQQSQP
PPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTLR
LSRVRSSDMDQQDDMLSGLENSSVSEGDIPFNVQYPGQTSKTPVTPQDVNRPLNAAQCLP
QHEQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQQVSHQGSIPSYDEVELDALAEIER
IERESAIERERFSKEVQDKDKPLKKRKQENKPQEAGGATGGNRAASQETGSAGNGARPAL
MVSIDLQHSXDSQATVPQDLDTIRKPEDIKQYNDGFVYVPQEDTVGVLKFKPENHPEIFR
KKSDFEGPKTDIQQNENRQMEFQQNESRRLESKHSENKQLEAKHESRQMDVKQIENRQTE
SKQNETRQMEMRQNEGKQNNGKQEVRQRPETPKQKSEGRPETPKQKSEGRPETPKQKNEG
RPETPKHRHDNRRDSTKPLSEKKIEISRHKLDVKSDPSRVKTESRSDPTKQRPDLRSVSD
TPRRDHDSLKQRSEDRGESERYRGDPSKIRRPEYLRSSNKSEHDSKHGIKSDGSKPEKIE
RKHRHESGESRERFSSGDQKLRPDSPRIKQEGKGDSSKSRLDKPSFKSPSSKDERRTDGN
KSKVDSIKAHTDNKAEFPSYLLGARSGALKHFVIPKIKRDKDGNVTQESRKTEFRGEQKD
KVEKIGLVEDLNKGAKPVVVLQKLSLDDVQKFIKDREDKSRGSCFKPNKNKSSKSNKGSI
DQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESS
RKRHKKDRDEAWEYEEHDKRSSGDHKRSGHYHEGRRISGSGRYRNRSPDDSDMDDYSPPP
SLSEVARKMKKKEKQKKRKSYEPKLTPEEMMDSSTFKRFTASIENILENLEDMDFTAFGD
DDEIPQELLLGKHQLSELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGSKLSTLL
NHNNDTEDEERLWRDLLTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFHLQNT
LYPQYDPVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLT
DTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSK
RSLRNFRLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSAEKDSNSEEESNKKVDQDVLI
TNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSL
LGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSIARILKQASGGEDE
IQQLQKALLDYLDENTETDASLVFSRKFYIAQWFRDTTMETEKAIKSQKDEDSSEGTHHA
KDVETTGQIMHRAESRKKFLRSIVKTAPTQFSTLKMNSDTVDYEDACLIVRYLASMRPFA
QSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSV
REAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITE
MCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHHDKEAMTRKILNITDVVAACRDTGYDW
FEQLLQNLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKGVNSGRLVACIT
TLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLA
TIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKSQHQED
PNSTILTANKPALLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEE
VQTKAIIGL
NT seq
6148 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtcgcagtttagtatttctcagaattccatgcgtggaagtcctgcatcttcc
aattatcaacaaaccactatctcacatagcccttccagccggtttgtgccaccacagaca
agctctggtaacagatttttggcacaacagaatagtccagtgcctagtccatatgctcct
caaagccctgcaggatacatgccatattcacatcctccaagttatacaccacatcctcag
atgcagcaagcttcagtatccagtcctattgtcacagctgggatgaggaatctccatgaa
aataaagtttcaagtcagttgtccggaagttcagctaaccatcatgctgataattctaga
catggctcaaatgaagactacctacagatggtgcacaggctaagtagtgatgacggcgat
ccttcaataaggaatgctgcatctttttccttgaggtcaccacagtcagtctgctctcca
gctggaagtgatgggacccttaaaggatcaagacaacctttaatccaacaatctcagcct
ccaccttattcatcacctagagatgttcccccagacatattgttagattctccagaaaga
aagcaaaagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaaaaa
gctgcaatgtatgatatcattagttctccttccaaggactccactaagcttacattaaga
ctctctcgtgtaagatcttcggatatggaccagcaggatgatatgctttctggtttggaa
aacagcagtgtgtcagagggtgatattccttttaatgtgcagtacccaggacagacttct
aaaacacccgttactccacaggatgttaaccgcccactaaacgctgctcagtgtttgccg
cagcacgaacagacagctttccttcaggcacaacaagtgcctgttttacaacagaacact
tcagttgctgcaaaacaacctcaaactcctgtggtacagacacagcaacaggtttcgcat
caaggatctataccgtcatatgatgaagtagaattggatgcattggctgaaattgagcgg
atagaacgtgaatcagctattgaaagggagcgattttcaaaagaagtgcaagataaagat
aagccactgaagaagcgaaaacaagaaaacaaaccacaggaggccggaggtgctactgga
ggaaatagagcagcttctcaggagacaggttctgcaggaaacggggcaaggccagcgttg
atggttagtattgatctgcagcatagcnnggactctcaggcaacagtacctcaggatttg
gacaccatcagaaaacccgaagacattaagcagtataatgatggatttgtctatgttccc
caagaagacactgttggagttcttaaatttaaacctgaaaaccatcctgagatttttagg
aaaaagtcagactttgagggtccaaagacagatatccagcaaaatgaaaacagacaaatg
gaatttcagcaaaatgagagcagacggttggaaagtaaacacagtgagaacaaacagtta
gaagctaaacatgaaagcagacaaatggatgttaaacaaattgagaacagacagacagag
tcaaaacaaaatgagaccaggcaaatggagatgagacaaaacgagggaaaacaaaataat
ggcaaacaagaagtaagacagaggcctgaaacaccgaaacagaagagtgaaggcaggcct
gaaacaccaaaacagaagagtgaaggcagacctgaaacaccaaaacagaagaatgaaggc
aggcctgaaacaccaaaacatagacatgataataggagggattccactaaaccattgtca
gaaaagaaaattgaaatatctaggcataaactagatgtgaaatctgatccttcaagggta
aaaactgaaagtagatctgatccaacaaaacaaaggcctgacctgcgttcagtttctgat
acaccaaggcgtgaccatgatagccttaaacaaagatctgaggacaggggggaatcagag
agatacagaggagatccatccaagattagaaggcctgaatatttgagatcctcaaacaaa
agtgaacatgattctaagcatggtattaaatctgatggttcaaaacctgagaaaattgaa
aggaaacataggcatgagtctggtgaatcaagggaaagattttcttctggggatcagaaa
ttaagacctgacagccctcgtattaaacaggaaggtaaaggagattctagtaaatcaaga
cttgataaacctagttttaaatcacctagcagcaaggatgaacgaaggacagatggtaat
aagagtaaagtagacagtattaaagcacatactgacaataaagcagagtttcccagttat
ttgttgggagcaagatctggcgccttgaaacattttgtcattccaaaaatcaagcgtgat
aaagatggcaatgttactcaggagtcaaggaaaactgagtttagaggtgaacagaaggat
aaagtagagaagattggtctagttgaagatctaaataaaggagctaagcctgtagttgtt
cttcaaaagctttctttggatgatgtacagaaatttattaaggatagagaagataagtca
aggggctcttgttttaaacctaacaagaacaagtcatccaaatctaataaaggtagcata
gatcagtcagtgttaaaggagttgcctcctgagctcctggcagaaattgaatccaccatg
ccactttgtgaacgtgtgaaaatgaacaagcgcaaacgtagcacagttaatgagaaacca
aaatatgctgaaatcagttctgatgaagacaatgacagtgaagaagcttttgaatcttct
cgtaaaagacataaaaaggatagagatgaagcttgggagtatgaagaacatgacaaaaga
agttctggtgaccataagagaagtggtcattatcatgaaggaaggaggatttctggtagt
ggtcgttaccgtaaccgcagtcctgatgactctgatatggatgattattctcctccccct
agcctcagtgaggtggctagaaaaatgaagaaaaaagaaaaacaaaagaagaggaaatct
tatgaacctaaactaacacctgaagaaatgatggattcttcaacttttaaaaggtttact
gcttcaatagagaatattttggaaaatttggaagatatggattttacagcttttggcgat
gatgatgagattccacaggaattgctgctgggaaaacatcagcttagtgagttgggtagt
gaatctgcaaaaatcaaggcaatgggcattatggacaagctctcaacagataaaacagtg
aaagtcctgaatattttggagaagaatattcaagatggatcaaagctttctacgttactt
aaccacaacaatgacactgaagatgaggagagattatggagagatcttttgacaaaatct
gctgatgcttgtcttactgctatcaatattatgacatcaccaaatatgcctaaagctgta
tatattgaggatgtaatagaaagagttattcaatacacaaaatttcatttgcagaacact
ctctatcctcagtatgatcctgtgtatagagtggatcctcatggtggtggtgtgttaagt
tcaaaagcgaagcgtgctaagtgttccacccacaagcaaagagttatagtgatgttgtat
aacaaagtttgtgacattgtcagcagcttgtcagagttgctagagatacaacttcttact
gatacaactattcttcaggtatcatcaatgggaataacgcctttctttgtagaaaatgtc
agtgaacttcagttatgtgccatcaagttagtcaccgcagtcttctccaggtatgagaaa
cacagacagttaatactagaagaaattttcacttctcttgcaagactaccaactagcaag
aggagtttgagaaacttcaggttaaacagcagtgacactgatggtgagcctatgtatatt
cagatggtaacagcactagttctgcagcttattcaatgtgtggtgcacctaccatcagca
gaaaaagattctaattcagaggaggaatcaaacaagaaagtggatcaagatgtgcttatt
actaactcatatgaaacagccatgagaacagcacaaaatttcctttctattttccttaag
aaatgtggcagcaaacaaggagaagaagattacaggccactttttgagaacttcattcaa
gatcttctttccacagtcaataaaccggagtggccagctgcggagttactacttagctta
ttaggaaggctattggttcaccagttcagtaacaaatctacagaaatggcattaagagtt
gcatcacttgactatcttggaactgtagctgcaagactgaggaaagatgcagtcactagc
aaaatggatcaaggatctatagccagaatactcaaacaggcttcaggaggagaagatgaa
attcaacagctacaaaaggctttgctagattatctggatgagaacacagaaactgatgca
tcattagtgttttctcggaagttttatatagctcagtggttccgtgatacaactatggag
acggagaaagcaattaaatctcagaaggatgaggattcgtctgaaggaactcatcatgca
aaagatgttgagaccacaggacaaatcatgcatagagcagaaagccgcaaaaagtttctt
cgcagcatcgttaaaactgctccaactcagttcagtacattaaagatgaattctgataca
gtggactatgaagatgcatgtttgattgttcgctacttggcctctatgaggccgtttgcc
cagagcttcgatatttatttgacacagattctgcgagtacttggtgaaaacgcaattgct
gttcgaacaaaagccatgaagtgtttgtcagaggttgttgctgtagaccccagtattctc
gccaggctggatatgcaacgaggtgttcatggtcggttaatggataactccactagtgta
cgagaagcagctgtggagctgctcggccgctttgtgctctgtcgtccgcagcttgctgag
cagtattatgacatgctgattgaaagaatattggatactggtatcagtgtcagaaaaagg
gtcataaagatacttagggacatctgcatcgaacaaccaacatttcccaaaattacggag
atgtgtgtgaaaatgattcggagagtcaatgatgaagaaggcattaagaaattagtaaat
gagacattccagaagctctggtttactccaactccacaccatgacaaagaagcaatgaca
aggaaaatactcaacatcactgatgtggttgcggcttgtagagatacggggtatgattgg
tttgaacagcttcttcaaaatctgttgaagtcagaagaggatgcctcgtataaacctgtg
aagaaagcctgtactcaacttgttgacaatttggttgagcacattcttaaatatgaggaa
tctttatcagattctgacaacaaaggtgtgaattctggtcgcttggttgcttgcataacc
actttgttcttattcagcaaaatcaggccccagctaatggtcaaacatgccatgaccatg
cagccatacctgaccactaaatgtagtacccagaatgatttcatggtgatctgcaatgtt
gcaaaaatcttagagcttgtagtgccgctaatggagcacccaagtgaaacgtttcttgcc
actattgaggaagacctcatgaaactcatcatcaaatatggcatgaccgttgttcagcat
tgtgtgagctgtcttggagctgttgtgaacaaggtcacacagaactataaatttgtatgg
gcctgttttaatagatactatggtgcactttcaaaattaaaaagtcaacaccaagaagat
cccaacagtacaatacttactgccaataaaccagcactccttagatcacttttcactgtt
ggagcactgtgccggcattttgattttgatcaggaggattttaagggcaacagtaaggtt
aacattaaggataaagtacttgaactgctgatgtattttacaaagcattcggatgaagaa
gtacagacaaaagccattattggccttg
DBGET
integrated database retrieval system
